XLOC_043440 (gene) - C. hemisphaerica

Overview
NameXLOC_043440
Unique NameXLOC_043440
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_507:43385..50558-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043440 ID=XLOC_043440|Name=XLOC_043440|organism=Clytia hemisphaerica|type=gene|length=7174bp|location=Sequence derived from alignment at scaffold_507:43385..50558- (Clytia hemisphaerica)
AAGGATACCTTGGGGATGTGATTTGTTTGCTGAAATCACTTCATCGTCAG AAATTTCCTCATCGTTATTAATGTTTGTCAAACCAGCCAACGTATTGTTT GTTTCAAGAGTATTCTGTATCTGTTGTATTTCTTGAAACAACACATCTTT GTCGATCTCCGAAAAATTCATATTCATAGATCAAGATCAAGCATCGAAGA GAATGTTTTTCCTTCGTTAGAATTTCGTCAAACCACAAGCGGTTTTTTCG TGAAAATGGCTGAATAGCTCGGCGCATGCGTGTTGCAGTAATTTCATTAT TGACAAAATGAAGATTCCCAGTCTCTCATAGAGAGTCATTGCATGAAGAT GAAAAAGTCATAAGGATTTTGGGAATTGACAAAGAGGACAAAATGGGCAA AATGCATATTTTGAAAAAAGTTAGGAATTAGTTTCATTTTCTAATTCTTG GAATTTTGAAGGGCTGGTTTCCACGATATAAAAATCCCGCGAAAGCTATT TTTACGTTACACGAGACTAACTTTCTTACAAAATTTGTGCCAAAAACCAT TTGCCGTCGCCGTATACTTATAGACCATAACAATTCAAAATGCCGTTTTC TTTTGGCAACACGAGCTCTTCTTCAACCTCAGGATTTGGTGGATTTGGAG CTACATCAAAGCCTTCAACAACAGGTTTTGGAGGATTTGGATCAACCTCC ACAGGTATGTTCAGTTTACCTATTTATTTTTTCAGTCGTCATAGAGAGTT TGCCTCTAGTTTTCTTTTTGTTGTCTCCATAATAGAGAGTCCCCTTCGGG ACGTCTTTGAACCCAGAAATATGGCGCGCCAAAAGGCTTTTTAATACCAA CTTTTTTTTATAATACCAACTTTTTTTTATAATACCAACTTTTTTTATAA TATCAACTTTTTTTAATAATNTTTATAATACCAACTTTTTTTTATAATAC CAACTTTTTTTATAATATCAACTTTTTTTAATAATGCCAACTTTTTTTTA TAATACCAACTTTTTTTATTATAATACCAACTTTTTTTTTTATAGTAGAG TCCCCTGCCCAGTTGGCGACCGAACGTCTTTGAACCCAGAAAAGTCATAC ATAAACAAACCTCTGGAGAATTTCTTTTGGTAGTTATCTGCCTTGACCTA TTTCCCGTACTGTGTAAAAAAGGTTTTAGAAAAAAACGAGTAGAATCCGA AAGATCCAACTTTGCACGGAAGCACACGAAAAAGCCGGATTTTTCAAAAA AAATAAAAAATGGCTACCTGTGGACAAAAAATCTTCGTAAGAAAAAACGC TTCAACTCCCACGCCAAAAAATACTTGTCCAAAACATTGAGTATGTTAGA AAGCATTTCTGTAAAAATCAGCTCGATACAGTTTCCTTCGTGTGAAATAT TGATAAAAAAGTTGATGCAATCAGCTTCGAAATTNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGCCAACC GGAAGTCGTTACTAGAGCGCAACCAGTCCTGATTACCCATGATTCATTTC GAGTGTGAAATGGCCTATTTGTTGCCAACCAAAATCCATCAACCGAAATT CGAAGTTTCCATGGAGACGATAAAAAGTTGCGCTTGAAATCGAAAGTGCC TTCTAGTCTTTACTGAACTCAGCGTCATTGAAATCATCAAAATGCAAAGT TAATCCAAAAGTAGACTCTAGTCTAGATTACACTAGGCTCGATACGCCAA TACGCCAGCCAGCCATCGAAATGTTAGACTAGAGTATACTTTTAGACCAA TTCCCTTCTTGGGATGGTAATTATTATTAGGACTAAGTTTTGGACGGGTA TTTACTGTCAGTATTTGGCCTAAAATTGCTGACATGGGGAATAAACTTTT AAATCTGATACATAGATCAAAACGCTACCAACAGCTGGAAACAAAACCTT TAACGATCGATTCACCTATCGACCTATTATTTTAACGCGAAATTTAAGAC ATTTACTTTCACATGTAAACAAAAAATATTTTCCAGTGAAGAACCGTAAA GGTCCGTCTATATGGTGAAAAAAGAAAATTGACTAAGCGAGACCAAAAAA ATTTATATCATAAAAATGAAAGTTAGTGTTATAAAAAAAAAAGTTGATAT TATAAAAAAAGTTGGTATTATAAAAAAAAGTTGCTATTTAAAAAAAATCT GATATTATAAAAATGAAAGTTGGTATTATAATAAAAATTTGGTATTATAA AAAAAAGTTGATATTATAAAAATGAAAGTTGCTATTATAAAAAAAAGTTG ATATTATAAAAATGAAAGTTGGTATTATAAAAGTGAAAGTTGGTATTATA AAAAAAATTTAGTATTATAAAATAAAGTTGATATTATAAAAAAAAGTTAG TATTAAAAAGCCCTTTGGCGCGCCATACAGAAAAGTCATACAATAACAAA CCTCTGGAGAATTTCATTTGGTAGTTATCTGCCTTGACCTATATCCCGTA CTATGTAAAAAAATTCTAGAAAAGAACGAGTAGAATCCGAAAGATCCAAC TTCACTTAAACACATGAAATAACCGGATTTTTCGAAAAAAATTAAAAATG GTGTGGACAAAAAAGCTTTGTAAGAAAAAACGCTTCAACTGCCACTCCAA AAAATACTTGTCCAAAACAATGAGTACTGTGAAGTCAGGTAACTTGCATC AGTGGAGGCTAACATGCATAGCCCTTAAATGACTGACCAATAATCAAAGC TGCAAAATTTCAAAACAAATGAACTACACAGCTTCGCTCGCAGGGCAGCT CTACTCTACTATTTTTGTTTTGATTTAACTTTGTATTTAAAGGACCAGAC AGGTCATTCATTTGAGGGCTATGCATGTTAGCCTCCACTGATACAAGTTA CTATCCGACTTCACGGTATGTTAGGCGACAATCACAAATATCTTCGTTTC GCGTCGCACGACCGACTCTCGAAAAATTGAGGAGAATTGAGTCGGTAAAT GTGTCGGACTTTTTCTTTCTTTCGTTCAAAAACTTTATTATTGCCAATTT TTTGCGAGTGATTTCTAGCGCATTTGCGGCATTTTGACTTTGTTTATCAT TACATGCGCAGTTTTTGATTGTCAGAGGTCACAGTGTTCAAAGGTCATAA TTGGAAACCACCCATAACACGTGGTTGTTTTGGGCTGGCTGGCTGGCTGG CAGTTTCATTCAAGAATACACTCCAAAAATGGATGATAGAGGTAAGAAAA CCCGAAAATTTTTACGACCGACCAACCGACCAACCCACTTTTTAGATGAA GATATTTGTGATTGCTGCCTTAGAAAGAAAGCATTTCTATAAAAATCAGC TCAATACAGCTTCCTTCCTCTGAAATATTGATAAAAAAGTTGATGCAATC AGTTTTGAAATTAGATGCCCTGTCTGCGACCAACAAAATCGAAAGTAAGA AAAAGAAGACTCTACATTGTGATCAAAACATTCCAGACACAGAGAAAAAA AGAAGACTTTAAAATGCGATCAAAACATTCAAGGGACATGCCCGCGGTCT TCAACTTGACAGTTCTAATGCGAAGTTTAAGGCGCTTTGGTATAGTGGTC ATCGACCTTGGTTAATGTACAGGCGACTGAGGTTCGAATCCCACTTGCAG CAGTTCACTTGGCAAGTGAATGAACCTTTGCCTGGGTCAACCCATGCCAT GTGAGGGGAATTGGGTAGTCAGTTCAAGGTGCTGACGGGGCACTATAATT GAAAGCGTCTATAGTTGCGAAAATGGGTCTCAAAGCCTCCTGCGACTCAA CCAAATAGAAATAGAGAAGAAAAAAATCTCTTTGACAATAAATTTGTTTT GATAACTCCACCAAGTTTATTAATCTTACTTCTTTGTTCCTCTTAGAGTG CACACACACTCGCCTGTGTTCCACTACGGATTTTTCTCATATTTCAATTT AAAAGCTTACTCGGTGCGAAAGAGAAATTGTGTATTTTTAATACGCCGTT CATTAACTCAAATCAAATGTCTTTGGAGGTTCAGTGAAATGGTGGCCAAA TTGCCGTCCCATGTTTTGTCAGATAGTTCCAAGTATTATAGCTCAAATAA TGTGAATACGCTACTCTCACCAGGTAGGCGTTCACACCGCAAATGGAACA AATCTTTGCGACAAGAAACACGTAAATGTGATCGCACGCATTCGCACAAG CGTCCAAATACAGATATAAAAAAGTCTGTTTTTCCGTGGAAAATTGTGAG TACTGTTATCGACACTCGGTAACTTTGACATGTCAATCAATTGCGCACAC TGGAAAAAAGTCTCTGAATATTTCATTCTTCCCAATAAATGCGAAAATGA AAAACGAAGAAGCTTTCGTTTTCTGATCGTCTTTTTAATCTGCCATGAAG TGTTATAAAATTCCTTATAGAAAGACACATTCTTCTCACAGACCTGAGGT GTGCATCTAAGAACCGGTTTGATTACAATTCTAATTTGTTATTTAAAAAC AAATGATATATATTAAGTCTTTTCCACACTTTATTAAGTTTTTCTTTAAT TAAGTGAATGGAGGTCTTATCGTTGCAAGATCTATTTTAGTTAGTAGGCC ATTTTTGAAAGGCAACCTTGAAAGATTTAACTTTATTCCATGAGGCAATT TTATCCAAGGCAAAGGGAGATGTAAAAATCATTCGATTTCAGATGAAAAA AATGGCACATCAAAAGAAAATTTGTTGCTGAATAGGGCACCTAATTCATA GCAAAGTCTTAGGGGTACCTTGTAATCATAGAGAATTGATAAATGGGATT AATTTATGACACCACTGGCTATCATTAATGTTGTTTAAATTCGTGATCTC TTTATTATATATGAAATGATTAATTATTTTTCAAAGGTGGAGGATTCAGT GGTTTTGGTGCAAAAACAACAGCGTCAACAGGATTCTCTTTTGGAACTCC ATCAACTGCAACAAGCACAGGGGGAGGACTCTTTTCAGGATTTGGTTCAA CAACCAAAACAACAGCTTCTACAGGTTTTGGTGGATTCGGCACAGGAACA ACAACTGGTTTTGGAGGATTTGGTGCCAAAACAACAGCTTCCACATTTGG TGGGTTTGGAACAACAACTACATCTGCCTCAGGTAGTAAGTTATTCTCAT TATTGTTTGAATAAGTTTTCATATTATTTTTTTATGAATGATAATCTGCA ATATTCTCTTGATAACAAAACCTCAGTTATATGGTAAGTAAATATATTCA TCTGGTGGCTGAGTGTGGAGCCAGGAGAGAGGGAGTCTATCCCCTTTTCT ATTTTGCGCTAGTACAGGGAGATCGAATGCTGAAGTGGAGCGCCACACCT ACTCTTAGCTTCCAGTAACTTACCACCCAAATTGATGAGTTGAGTGAAAT CGGTGAGTTGGCGGTGACCGGGGATCAACCCACAACCCTCAGATTGTTTG GTGAATGCAGGCCACACAGTCATATTTACACTAGCATATTTTATACCTAT GTATAAATTTACCTTTTTTCTCGATTTTACTTAAAGCCAGGGATACGAAA AAATAAAAAAAACGGCTGAGAAAAGGCTGATCAATTAAAGACATAGAAAT CACTTCTTCCTGTCGTTTCCCAATTGTTTAATCTAAAATATCTTACCATG TAAAATCCTGCTATTTGAAAATTTGAAATCTATTTATTTAAAAGTGTAGG TGCAATGTACATACATACTTTTGATAGAAATTTTTATATTAACATATCAT TTGATATTAAATTTCTCATCGTTCTTTTCAGGATTTGGTACAACCGGCAG TCTATTTGGTGGTAGGTATCTTTGTGGTCAAATTTGGTCAATTCTCAACA AATTCTGAAGAAATTCTGAAGAATTCTCGAAAAACTGTTTCTGTTATAAA TCTTATCAGAGTAAGGTTTCAGTTATTGAAGTTTTCTTTGTGTATATTTT ATGGCCTTTGATTTTTAGGGTTGAACAAAACAACAACAGCAAGCACTGGT TTCTCTCTTTCCAATCCCACCCAAACAGGATGGAATGCTGGTACGACACG TAGTTCTTCTTTGTATTATTTTGTCAAGTAGCAAATGATCATTTTCATGA TGTAGTTTTTTCTCAAGTTTCCAGTTTATAACGTGTCATCCACTTAACAT CAGTTTCTGTCAGTTTTGATGTAAAATCTTATCCTCTCAAAAAATAATTT ACTCAGTGGTAAAAAACGAGATTGTCAACTTGTTTAGGTCAACAACAACA GCAGCAAGCTCAAGGTTTGGACAATCCATTGGCAAGCATGACCAGTGCAC TGACAATGCCCACCATCTTTGGTGACGAGCGAGATGGCATCATTGCCAAA CTGAACCAATTGCAAGCATTGTGGGGTGAAGGGAAAGCTGTTTATTCACA CAACGCACAACCTATTCCATTGTCACAAGAAAACCCTTTTTCACGATTTA AGGTACGGCTGTTCAGTTGATTAATTGCTATTTAGGAACTTTTAATGAAT TTTACTTTTCGAGACACTATTAATATTATTGCTTGGTTTCTGCCAATATA ACAAGAGTGAAGCTTTTGGCTCGATGCTAGTGGGTTTTGTTGTGAATAAG AAAAGTAATAAGCAGCTCTTTGCATGCTATGGTGATTACAAACACTAAAA CGTAATAATATCCAATCTTTATCACTGACAGACGATAGGTTACAGTTGTT TACCATCTGCGAAAGACAGTGATGGTTTCATTTCGTTCGACTTGAAACAC AAGGAAGATTACGTGAAAACCAACCAACAACAATTTGTCGAATCCATCAG TAAAATCATGGGCAACAAACCGACATTCTCCGTATGTGTTGATGGATTAC GCAGTCTTCCTGGTGACAGGTAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069765TCONS_00069765Clytia hemisphaericatranscript
TCONS_00069764TCONS_00069764Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069764-proteinTCONS_00069764-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_507supercontigscaffold_507:43385..50558 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
92.03 89.2 122.43 119.66 65.82 57.2 34.25 37.63 32.6 37.9 35.03 36.78 40.37 47.19 34.18 40.93 42.99 41.78 17 16.54 32.32 35.4 53.61 50.4 51.62 48.87 13.5 11.18 27.31 32.64