XLOC_043402 (gene) - C. hemisphaerica

Overview
NameXLOC_043402
Unique NameXLOC_043402
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_506:437061..446777+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043402 ID=XLOC_043402|Name=XLOC_043402|organism=Clytia hemisphaerica|type=gene|length=9717bp|location=Sequence derived from alignment at scaffold_506:437061..446777+ (Clytia hemisphaerica)
TTATTAGAACAAGATTAAAACATTTATCTACTACACTTAACAAGAAGAAG TTAGCAAACCCACCAAAGATGGAGtttgaaaatcttcaaatagaAGTGCC AGTCAATGATGAAAGTTCTCCTATGTTTGCTGCTAAAATATATGTAAGTG TTTTAATTTTAAATAGAGTAGATCCTAAGTTTTTGAATAGGTGGTATTAG TCATTTCTATATAAAAGATTTATGAAGTCTTTTTGTGATCGAATACTGTT TTGACTTCAACTTTTGTTGTTGTAAAAGGATTTGTAATTAGACTTTGGTA AATTTAATTGTGATTTGACCCAGATTTTAAAAATCCTAAAGTTCTTCCTT TGGGAAATTGCCTGCCATCTATTAAAAATTTTATGGCGAAAATCCTCATT CCAATATACCTTTTCGACCATAGTCGCACAGAAATTCGCGTGCCATTTGA TTacaaattaaattaattttcgATTAAAATTATCCCCCGAAACTAGATCC aattttttgacacctttttcttttaaaattatgaaaaaaagacTGGTTCT AGTTTAAGGTTATAAACacagcaattggcggctacggtcgaaaaggtgta tttgataaaaaaatgtcATCTTATTGATTTGGATTACACTTCGTTTTCAG GAGAAGAAATATCataacaaaaaagattttgttgttGGCTTCAATCCCAA CGACAAGGTAGCTTATTCAtctacttaaaggttttgtttttaaataagag tgatagcgtttgcttactcatgaattttaatttacaagttttttcacatt gaattgacacagatgtggagcaagattggtcagaaagaggaaaagaaaaa caattttttacttATATAAGTATactataacaatagcaagacactgtcct gatatgaaatatgtgtctgatatgaaacggaaacacttatgtaaaaacaa aacctttaatcaaGTCTCTTCTGTACAATATTAATGTAATCTCTATTAGG TTTGTTTGTTTGCCCAAACTTTTTAATAAGAGGGATCTTGCTTAGGGAAA AATAAcccatggtttcagcccacttttcaggtgcccccattgaagcatgg tgcccccaacgacttaggtccccttgaaaaattgctttgagttaggtacc cctattcagcagacaatttctttgaattgacactttttgttcttttgtca cTCCTAAAATCATGCTCACGCATGAACGCCTGCTAATAagctttgttgtt atgctataaagatggcggctgtaaatcaaaacaatNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNggtgctggggtaaaaaaattcaata atttgaaatattttgaaatattcgatttggaaaatataaccagcccccag agcctccatcaagacagctaggtacgcttaatgaataggtaaccccaaaa aattgcaaggcattagcccccctctactaacctggcctaggtgcccttca gatttctggggggggggctgttaCCATGTAACCTCTGGATCTCGATAAAT GGACCTTGTCAGACATAAACTCACAGTAAAATATGAACCAGTCTGAAAGA CAAATCTTAAACACTTTTGGGCGGAATTTGGACAAGGTTAAATGCAAGAT CTTATATTGTTATTAGCCAAAATCTTTCCTGAAGTCGACCATGTCAGACA TAccttttgaaagtttgataatTTTGCAAGATTTTGTTTTCAGAGCATGA CAGAAGTACCCTGACCAGAGACACGACCCTATAGTATACAGCATTATACC TGAATAGCCCCCTTCCCTCAGAAATGAACTATACAGATACATAGAATGCA AAGGGGCccagcccccagcatttttcaaGAGGGAAATAGCCCCAGCTGAA TTTTAAAAACGTAGCTACAAAGCAAAATATCGAAGAAATTTAGTATGCAA ATTCTCGATAGATCTATTGCACCGCTggcaaaatttattttaagagGTGT CAAAACCTTCaccacagcatagatttttaacaagATTTAAAGTATTTCTA ACCTATCAGCTCTAACCCCAGTACTACTATTTAAACACTCATCCCCCCCC ATAGCAAGCTAGCTccaagtattttttttaattgtttagccacagggggg ggggggggggggtgcattctatgtGATATGGAATACAccatgaaaatttt tactttatttcaatttaaaCCAAGTCAATTTTACCATTAggaatttattg ataaaaagaacaGACGTGCGAAAAGGTTTGGTATCaaggaaagagaaaaa caaGCACAAGCACAGCAGCTCCAAGATGAGACAACAAGCACAGGAGAAGA AGCAGAACCTATTGCAACAGATGATGGTGATTCTACCAACACTGTGACGA CAATAGGAAACGAACAACCAAAGAAAGCAACCACCAACTTTGATTCTTCA TTCTTCAAAGATGTCGACCTGAAGAAGATTAAGTAAGCTTTCATAATTca tattttgatctttttgcaTGTACAAATTCTGTAGTCTGTTGGTAAGTCAA GTCTTCGTCATTTTACTCCTaattatttttaataatggCTAAACATGTCT GTCTTTCTGTCGTTCTTTGTATTATGACAGGGCTTGgtataatttgtttt ttaacaACAATGTCAAAAAATCGTCCTTTTAAAAGTATAAAAATGAGTCT TATATGGTATAATTTTGGATTCGGGCCGACCATTGATATGTTGAAAGAGC ATTAATCTGCTGCGATGCAATTCTAGGCTTAAGCACAGAATTTTTGTATG AAACTTTTCAAGAAAGcaataaaaagcttttacttgtGTATGTTCAGTTA GGTAACGAACGACAAACAGAGAAATAATGATCTGAGCATGCGTTAAACGA TTTTATTTGGTCGTTTTAGTTGGCCACCTGTGTTGGATTGCGCCCTGGAT CAGATGAGATTGGATGCCATTCACATATATGGCGTAGATAATATGAGCAC TAAAAATATCTTCGCTTATTTCGATTTGTTTGGTCCTGATACATTGGAAT GGATTGACGACCGTTCTTGTAAGTAAAGAAacatttgttatttttttagt ttttcactccatcaaattgaccaaaaattatttgttttgtgTTAAGGCTT GGGGAAACGAGAAGACTTTTTTcgtgttggtgcaatgcaacctgctccat cccaccaacctgaaacgctttctcgtgtctccaccccattttctttctac caataaaagtgaaatctcacttttgtcccagggacaaaatcagcgtgtct tttggtatttccctcacttttgtcccatgaaacaaaaaagaaaccatggg acacgtactttttttcttgtgttggtgggataaagcatgttgcattgcac caacgcgaaaaaaaacttctcgtgccCCAAGCCTTTATTCATTTTTAGCT TTCTGATTATGATAAAATAATAAAGTAGCGACATTGAGCGAATTTTAGTA GACCCTTCCTCTTTAGGTTTTGTGCTTTTTTTTGTATGATGGCTTGAAAA TGACCAAGAATATCCTTTGCTGTTTGATCATACATTGACGGAGGTCTGGG TCCCCGAATTTCTAAGTTCGATGAATAAAATGCTCGtttataggccattt cacagacgcaaagcgtaatgggtaatcaggaccacagCTCGCTTTTGACg tcttactattggtccaaagttttgatatttgcgtctaaccaacgggaagc cgttatggaggcgcaatcagtcttgattacccatgatccatttcgactgt gaaatatGGCCTATTGAGAACTCTTTTTGCGAATTaaagatttgaagttt tacaaaagaaacaaaaaaatggaaaagagTTCTAGAATTCCCAAGTCAAT TGAATGATGACAGAATATCAATGTCTTTCTCGAAGGGAAATCTGCACAGA TTTGTGTATTTTCCCCctttaaattgaataaaaaaatcatgtaacagatg cacgaatcctatgaaacaGGCTAATAGCACTATGTTCGTTTCCGACCCAG TATTTTTCTTTTGGGACTAAAATATCATTCttgtaaataaaataaaaaac acgtGCATTGGAAAtggaattttaatattttctcttgtGCCAGGTAACGT GATATGGGATGACGAAGCGACTGTCAGTAAAGTAATGGAGTCCATGAGCA AAACATACAAATCCATCAAAGAAATACAGAAGGAGCATAGAGAAGGTATA CACTATATAACATGACTCGATGGATAGTCCTCTATAAGTTGGGATTGCTA GTCGTTAAGAGACTATtcaaagacacccctgtctcacagccccggtggaa cctttttcctcagtagaaataaaaattcctattaaaatcccaattgggat agaaattatattgttccaaggttaaaaaatccagtggggatggttttgga gtgaaaTATTTAGACATCGaattttcgagtggggatgaaatcaaagttga tttcccaatggggctgaaattccaggacattttcccaccggggacgaaat ttttgtcaaattttccagtagggaTGGGcttccagcgggtctgtgacaca gggatgttcAAAGAGAAAGTAACATCCGCTATGTAATTTACaatgaaata ataataataaaaaggtCCCACTTTTGGtcctttttcgaaatttttcaatt caatttaagTTTTAAGCAAGTTTGTCATGAAAATCGATTTCAGTTGATTT CACCTGACGATAACACTCGGATAAGGCCGaaacatttgagaaaaaaagct tttcaaaaaataaagcttttgtattttccttttgtattttagaATCAGTT TTTCCATAGGCCATGTGTCTTCTTCATTCCGGGCGTAATACTCACCGCTC CTCCTTTAAAAGGCAAAAAGGTTCGGAAGCTGTCAATCGTGTAGACTTCA TCGTGTTTAggaattctttaaaaatttctacttttctcacttttttcgat ttttctaatAGAGATGGCATCATCAATGAGTCCTACTATTACCACACAAA CACAACAGACCAGTGAGGATGGTGTCACGATTAAAGTTGAGGAGGGAGAA GAATCAGAGCAAGAGTCTGGAGAGACTGGCAACAAGGCTATCTCTATAGA AGATGACGAGGATGATATTGATCCGAGAGATGTCTGGCGTCTAGGCTATC CCTATCAAGAATACCAACTGTTTATGAGGCCGGCTACCATGAGTAATTGT CCTTTTTTTATTCAAGTTATTCATGCTCGCCTGTTCATATAGCTGGGTGt ccattaaaaaagaaatttctagGTTATCTTTCTTTGCAGCTATAGATACT ATTGATTTATTTTGCTTTCAACCTGCACAAATATACTCATATGTTCCAAA TAAacgcggggggggggggggaaaattttaaatttttgaaaaaacccccc cccccaaagggggggggggggggggaaaattttcgagattttaataaacc cccccccccccctaattgccgggggatgttaatgttaatgtatatattct ttaaagtcgaaaaatgtgtacaaatctttctttgtttttctgtctCCTAA TCTGTGGCGAGTTTGTGGAttaaaaattgtacttctgaaaaccccccaaa aaatggtaaaaataaggtaagtataggctaaaatcaggctatttagagct aaataaggggccttctctttgacagctgaaaatattcttaacaattAATA AACGGgaatTAACAAtcgggggccgtttatttggaacctaagagtaggcT GCTTAAAGGGCTGTACAGTCTGTCTCCGTTAAAGCGATGAAATCTTTTAC TACATTTCTTTATCGTAAAATTACTGGTTTTTTTATAGGTGATAAAAAGT TACCGGGTGCCGCCTCCCGGAGTCAATACTATCTGATGTATGGTAAAAAC GAAGATAAGAAAAAAGGTTAGAGAGACTTTGTTATATTTGATAAATATTT TGTACGATGTTTGAAAGTTTTGGTCAATTCATACCTCTCGCCCTGATTTT CTACCGCTGTATTGTTGTCCGTCTATCTTTAATTTAACGTAAATAGTTTT GCGAATTTTaactgaaatttgaaatttagacACATCAAACTCCTCGCCTA ATTCGCTACAATGTTGTCCCTAAAGCTATGGACTAAATGGTTAAGATTTN TACATCAATTAAAGTCCTCACCTAATTCGCTACAATGTTGTCCCTAAAGC TATGGACTAAATGGTTaagattttacattttttaattatttctagTAAAA GGCATTGTATCCAAATCAAGGTATGTTTGttacaatttgaaaatttgaaa tgttttcaatgtttTCCGAGCTCATTATGCATTTCTGTCTCAAAAACGGA GAATTTCTTCTGTATGAAATAAAAATTCTGAATTCTACTACTAAATATAT CATGATTTTATGTCATTCTTGACTGACGTGAAAACTAAGCTCTTTCCCTT TCACTCagattcattcattcattcattcattcattcattcattcattcac tcATTCACTCATTCACTCATtcactcattcattcattcattcattcactc ATACACTCAtacactcactcactcactcactcactcattCGTCTTATAGG AAACGTAAATTGGAATCAATGAAGCAAAAAGCGGACGAAGTATTCAAACT AAAGGAACCAGATGTCAAAATTGTTGCATTGGATGAACTGTTAAATGAAG GTACTTAaacattctttcattttccacTAATAAATTGACCCTTTAgcttt tcttcgttttttttccACTAAGAGTCTTTTCATCGAGTTTTATTTTCCAC TAAGAACATCAAAAACCTTAATAACACTTTTTGATTACAAAAGACTAAAG GATCGATAGGCCAtgctttcacagtttgtattcatactgaaaatcaaaat caagtgaTCTTTTACCCTTTTATTCTACATGAGATTTCCGTTCTCATTTG TATATCATTTTTTCTTGGTTACAAGCTTAGAAAATTCCTACTCTCATATT GTCGTAAATTGTCTTAAAAGTTTAATTTTCCAACGTCCGCAAAGCCTGAG AGtattcttacaatgttcttattttctattTGTGTTGAAAAAAGGTAATC TAAAAGATTACAACGCCCTCCATACAACATCACACACACACACTATTTGT GTTGAAGCCTCATCTATTGTGTCGTACACAGCTACtctaaagattttgtt tttaaataagagtgatattgtttgcttactcatcaattttaattcacaag ctttttcacattggattgacactgatgtggagcaagattgatcagaaaga ggaaaagaaaaacatttttttgcttatatcagcacaatataacaataggc agacactgtatatgaaacatgtgtctgatatgaaacgggaacacgtAACA CTTACCTTATcgaccaaaacttagtcggccttaattattagtcggcccta attttagtcacctcgtcaaaatttagtcactaagggccgactaataacta agttttggccatttctaaatttttaattgGCCCAAATTTTGGTCGGCCCT AACTTTTAGTCGGCCCTTATTTTAGTCACCAAggcaaaatttagtcactt agggccgactaagttttggccgataaggtaggtaaaaacaaaacctttaa ccctTTACAGGCGTGGTCAGTAAAATGGAGGTCGACGAAGACGAACCAAC GATCAAACGTATGAACATACAAACTGACACTTTTGACCCAAGGTCCCGGA CCATGATGGCCGACCGCGTCGAGATTGGCCAACAGTTCGGTAAACGAATT GATGACGGCTATTGGACGGGTGCTTCTGCAGTTCGTGATCGGTTAGGTAC GAGTTCTTGTCTTTTTTGTCATCAGATTTTTCGTATTGAAATTCTACGCC AAAACAAAATCATAGAAAGAAGATTAGCatagtactctcgggtaccttat agccgtccccccctgctaattaatttttcgaaaattttccacccaggaca ttcttattccaacccccaccgcttattaattttttggaaaattatgtTGA AAGTtcccctcttttgtcctaattctgctgtattaaccttcttttcacaa attttccacccaggacatttttattccaacccccccctgcttattaagtt ttgagagtttttccaatttccccgcttattccaatccccccggctattag gtacccgagagaacgaaccaaattttcatttttcacattTGGTAGAGGGC Atattgtaaaatcgctcgattgttttggtcaaagcacttgcttttacatt tttggaaagctaaggggtaggggaatcaaaataatttgagtgccaatttt tttcggacactttggtgtgattttcggacaaatatgacggtttcaggcaa aaatcgtagggtcaaaaattaatgaaaatttcagcttgagaaaacggaga cctgttgtaaatttttggaaagctctcaaaaaattaagatcggAGATaaa ttgcgagtataggtgatttctgtacctaactcgagatattaacccttaaa aacagggtttttcagccagaaacagctgttttgtccagctTTTGCACTTT TAATAcctttttgccaaatttttctttcttttaggaCTTCGAAACGATGA CACAATGGACGATCCACACCGCGTGAACGATTTGCGAGCTCGTCTGGATA AATCAAATTCGATATACGATAGGTTAGGACGTCGAGGAGGAGATTCTACT AAAACAGAAGAAATGGAGGATGCGCGTGGTGAAATCGAACGCTCAAAGCG CACGAACGCGGCTAAATCGAAACGTCGTTACCGCGAAGACGGATACGAAA AAGACGGCGTATATCACGATATTTACCGCGCGGAAGACGCGAGCGATATT AAAGAAGAACCTTTAGACGACTCTCCGCCACCGCGCTACCATCACAGGCG GCCGCGCTCGGACGAGGAGGAGGAGCGTGAGCCACCACGTAGAAGTAATA TTAAATCTAGGTTAGGAACTGTGAATACGTCGTCGTCTGGTAGTACTGAC TTAAGAGACAGACTTGAAAAACGACGAGGAGGTGGAGTCGATAAGAACGA TAAAAATTCGAGGAAAGATCATCGAAAACGATACGAAGAAGAGCCAGACA TTAAAGATGAGCCAATCGATAATGATCGATTAAATTTGTGTATCGAGATT AAACAAGAACCGGAAGAGGATatggattttgaattttgaattttgaaaaa ttgaaggtTTTTATTATTAATGTCTCATACCatttgacttttttaagcat tttaaggAGTTTTCTCTTTTTAACCTCGTTcctttgcaaaattttaatta GATTTAATAAATGCTTTattaattaaagtctgtctccaAAGTATGTGTAc actttacttttttaaaaatttttttatacatCGTTGAAACGATATTTCCA AGGAGAataaagttaaagatttttgaaaagtgtccacatacttttggAGC ATGAACCAAAAAACGAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069700TCONS_00069700Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069700-proteinTCONS_00069700-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_506supercontigscaffold_506:437061..446777 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.42 10.27 4.93 4.05 38.84 28.89 30.65 33.74 22.57 25.18 18.88 14.92 15.49 16.78 15.06 15.27 16.83 17.1 8.12 8.71 12.3 11.87 22.73 20.61 25.18 26.09 9.03 6.74 18.68 21.71