XLOC_043205 (gene) - C. hemisphaerica

Overview
NameXLOC_043205
Unique NameXLOC_043205
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_498:32990..44094+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043205 ID=XLOC_043205|Name=XLOC_043205|organism=Clytia hemisphaerica|type=gene|length=11105bp|location=Sequence derived from alignment at scaffold_498:32990..44094+ (Clytia hemisphaerica)
gaaattttgtaaaaaaaacaagtattggaAAAGAAATAAACCACTGCGAG GCTGCTGGTAttcactaacggattcgtgcacCTTATACTTACCTGCAGTT TTCTAGAGGTCTGCTAATCAGACTATATTACTGTTTGAATTTGATTGGAA GAATTGAGAAGATGCGAAGCATTATTGCAGTTTTTCTGCTTTTTGCTATT GTTCTTGGTAAgttcaaaattcaattcaaatattTAATGAGATTAATTTT Ggagggaattaaatttcgcaggtgagctcatccgcgaatttaatttcgca gatgACTCTATCGTGAGATAGTATTTTTAcgattttattctatttttgct attttactGCAAAACTATGCACGTAAGTTgtgaaatacatgtttttttat aagcaagtggcCCCTTGGTCAGGTTCGagtatgcttaagctttcaaCTCT TAGCTTATGctatgcttaggaaatctgcaaatctgagcctccatatgctt ataagcgttatgcttataaaaaaacatgtatgcatTGTTAGTGCTTCTTT AATCGCCATCATGATCGTAAACAAACATGTTAAAAGTggtcttttgacat tttttggaattttattcaaaaaagatttcgcggaaaagaccttttcaaat ttccattagGACTTATTTTCGCAAAATCCGAGAAATCCACGAAATTAGTC AAATTAATCCCATTTAAGTAGTAGACTAATTTCGCCATTCCAAACGAAAA CactgaaattcaaataaagCTATTcgaagttgaaaaaattaatgaaaaat gacaaacaaacaaaaaaaacagattGTTTGGAAGATTTTTCCACTGTGTG GATcccaaaacataaaataatgtTTATCAAATGAACTCCAATCTCTTTAT TTCAGTAAGTTGCAAGGAAGAAGGGCCATGTGGAACGTTCCAAAAATGTT CGGAAAAAGCAGACGAGTCAATAAGAACCATCAGCTACTGTGCCAGAACT GAAGATGGTGGTTATGAAACCAAAAAGGCTGCTCCTAAGTGCTGGAGACA TTTCTCAAAATGCATGCAGATGAACCCAAATCAAGATGTTATTTTACATA AAGGTAGGaagatttttttagtttttgagagTTGTGAAAAACTGAATCTg attgaaatttatcaaaataaaacactCTGCCTGGAAGTGCTGTGTTCGAA TCCTAAGCGATTCTAAGCAAGGTGTTAGGGAAACATGGCGATAGGCTCTT CCTTCACTCATCggccgtagtgcagtggtagagcatccagctacggttcg caaggtcatgggttcaacccccagtcgggtcataccaaagatttccaaat ggtacttgatgcctctctgcttgatgctcagcaattaagagaaggatcaa agTTGAGTGGAGTGAGAAATCTAGGCAGAAacagtggcgccctcccctac cttggGTAAATAGCTagcgaaagaggagccttcgggtcgcctccgactgc ggtcaaAGACCTACTATTTACTTACTTCACTCatcttattttgattttaa tcttattttttaAAGGAGAATGCAGTAATTGCACAATGGAGAATGTGTGT CGGCTAAACGTGGAAAGAGGAAGAGTGAACAAAGGTAAAAAACGTCTTGG TGGAATATGGAGAAGACCAGTATGTAATGCAGATGGAGAGAAAGAATTTG CAACTTTGTGTGAATTCCATAAAGCAAGATGTGAAGCAAATGTCAATGAA GATGAAGACATTCCACAAGGAAGTAAGTTGATAAATTAAAACTCATAAAT TTTATTCAAGGACCTTCACAGCTGATGTTGAGAGGGTTAATAGGTTAACC AATACTAGAGAAAATTCTAGTATGAAATTGTCGACGAAGACAGCATTCTC AAAAGACTGTTCAAATGCTAAGGTCCTACCCTGGTCAAAAATCTTGgaaa gattttacaaaaatttacaactttttgaaagaatttgtgACAAGATTTTA CATTCTTTTGTaagttcaaattcaaatttttacaaatctttgcaCATTTC TGCACAAATTTGCGGAGTTGTGCACACTCTTGTGAAGAACAATGgaaaga tttgtaaaaatttgaatgttgAAAATGACAAAATCTTAATTGCAAGAATT TACAAGTTAAAACGAGTGTGATTGTAAATTGTATTGTATTGTTTCTTTAT TCCATGTTGGTTGCAAGAAATGACAGCTTAGGGTTATGATAAAATTACAA TGAAATAGCAAATGCTAATAAACACCAACCCctaatagggggggggggtt tNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNg gggtttcagggggtacccgattccgcaattccgccaattttttcttcaat ttccgtcaaaccgtcttaaattgaaccaaaattccgtcactgaaaattcc tttgaaattcaatatttttgtcgaaaattccgcaaattttgaatatcttt taccaattccgaaattccgcaaatttttttgcaaaattccgtttttccgc accaaaattgtctaattttccgtctccgtcagggaacccaatttccgtaa ttccgtctaaattttcgccaaattccgccactccgtccgaaaaaagggcc gattccgctcctccgccaaccgtgaacccccccccctaatagATTTTTTA TCACGGCATAACCTGCAGTTGCAgagaatttcattttcttttgtgaAATT CTAAAGTAATCAAGGAACTTGTTCAAACTCTTCAAGAGAGTCTGCTAATT TATTATCAACTGACAGGTCATTCCATGATATCATTGAACGAAAGCCGAGC GTATGGATGCCATAAATTTTACCATGAACATCAGGAAGTTCTAGAAGAGA ATATCTTTGTAATTTATAAGGATATATCTAAGATCTTGAAAACTCCCACA ATTTAGATTtagttttttagagatttgaaGACCTCATGCATGAGATTTTG Aagggccccccccagcggtttgcgtgaatgcgtgaataggcttttttggt tgcgtgaatgcgtgaaaattgaaaaagaattgcgtgaatgcgtgaattaa aaaaacttgcgtgaacgtgaaaatccattttctattgcgtgaatgcgtga ataggcttttttggttgcgtgaatgcgtgaaaattgaaaaagaattgcgt gaatgcgtgaattaaaaaaacttgcgtgaacgtgaaaatccattttctat tgcgtgaatgcgtgaatctgccctgtttttttcatgaactgggggaattt cccttttcacCCAGTTTGCAGAACGTGGCACGTTTGTTCGAGATTTTGAG TGCAGCACTCGCCAAAAGTCGAGTACaagtacatattttttcttttataa gcataacgtttataagcatatgcaggctcagtttttggtcactaaacaat ggctctattgtttgagaacaatagaatgctaagcataatgcgagcttgat gtaggggcagacacttgcttataaaaaaaaaacatgtatagttTAGTCAG GCCTCAccacaaatttttaattcaaagaaattttttatacCCATGATGCA GACTTTTGAGAACCTcatttcttggcaaaatcagtctgaaatggagtcgt atttaagcacatcagagtgtgaaaatagaaattttccccTGTCGGCCCAA ACCGGTTGCGCCTcccttagtcactatgttttcggccactccacgttagg aaatcaagacgcgagccctgattaaaactattctttttaaaatttttgtt tgctcgcttcgctcgcaacaaatgttcatccTTTTACCTCATTTTGCAAA CTATCAAGCGATCGTGCCTCGCCTCTTAACGAAttttagactacattctt tttcaatggtgttaaagatagcatttttagccaacCGCGAcgtgacagaa atgcaaaaaaatttcctctctgcgcaaaccatggttgcgcctccttaccc cttagctaagcattatggtGTACCCtggagtttgtttgacctatttttga taaatgaTTAAGATTcatatttttgtacaaaaattcgcctgcggcgcata tcttttcacttattATCGCGCTACCTTAACTGGAGAAGTTTCACCTTCTC TAAACGACAGTGACATGTTAgatgaataaaatattttgcgtgatggcatg tgattaaagttAAAAACTTACGTAGCGCTTTAAGCTAATGTGCTTATAGT CAGgtgtacaggaaaaaatcactactgaNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaatcactactgagttaag tttttctcaagtgcatgaccagatccggtcgaaaAATCTCGAGTGTAGCA GCCTTGCCATTTTGGTTCCGCTGGGGCGCCTGGTATACGAGGGCATTCTA CCATTTATAGTaccgtaatttctctaatttaatacgaccaaaaaaataat tattttggaggTGTCGCACTAATAATAGGAGGATATAAATTGCTCTGAAT CTGGAATCTTTTTATCGTACTAATAATTAGAGGAAAAACTTTGTAAAGGC GCGCTAAATtggaggaaaaataaaaaagaNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNctgttttttgtttctttcttttttaagcttttttctaacccat attttcttctcttttcaaACTCTTCCAACTTTTCACGTGTCATCTGCCTC ATTTGGGCGAAAAGATCAGCGTTCTCAGTCTTAAAAATAAAGCTTGCGGG AATTTCCATTCCTCCTTTAGGCAGGTCATGAGAGTATCTCCTTTCTCCTG TAATTTTCACCGACAATCCTCCTCCattcttgatgaaaaaatatgttaat tttgacaaaaatttgggaaCGTGTCCAACCGTTTGACCATCACTACAGAT AGCAATCGCGTATTGATCTTCGACTAATGCACCAGTTTGATTGATCTTCG ACTAATGTAAGTTGGTTGAAAATAAATGCGATGCTCTAATGATACCAGCA GGATGCACATCGATGCACATCGAAATGCCAGCCAATGGATGTGTGCATCA ACAAACCTTTCAAAGCCATTTTGCGAAAATGTTGGGTTGAACACGTATCT AAAGTCATCGAGAAAATGCCTGAACCCTCATCAAAACCCGACTTCAAGCT TCCACCACCAAGCAAACAAGATATTGTAGACTGGGTTGAGAAAGCACACA AAGTTCTGTCAAACGACAAAGAGATGGTAGCCAGATCATTTGAAGTATGT GGCATCACAACAACTGATCCAAGCAAAGTGAGAAGTGGAGAATTCTACGA ACAATGCATGGGTAATGCTAAAACTATCTTAGATTTAGAGGACGATGCCA CTGAAAAAGACGATGACGATGACGACCCTTTTGAATtgtaaataatattt ttgaaaatttgaaaaatttgaaagaacaaAACTAATCCTGAAAAAATCAG TTCGTActataattagaggaaaatttgaactttaccgtattaaattagag gaaaatcaaAAGTAGGTAAATGGGTGCTCGCACTAATAATTAGCGGATTT AAATTAGttcaaaatgacgaaaataattTCCTCGCATTAATTAGAGGAcg tattaaattagagaaattacggtAGATTGCAATGTCTAACGTCTGCCCCA CTCTCGACTacttaacaaaaacaaacgactaattcaGACTCTGCAAACAG GCTTTTCACCCAAATGTGTAGAAATGTTTgacaatttccccgatttttcc gaatatttccccgatttcccaaaaaatcgggtttgcgtgaatttcgagaa aaacttgcgtgaatgcgtgaattgcgaaaattttttgcgtgaatgcgtga atttagggtccgctgggggggcctctttgaAGGTTCCTCTGACGAATGGT AAAATGATAGCCACGCTTCGGAAGCTCTTCATAAGGANAGAGATTTGAAG ACCTTACGCATGAGAGTTTGAAGGTTCCTCTGACGAACAATGGTAACATG ATAGCCACGCTTCAGAAGCTCTTCATAAGGAGAAAAGTTATCTCGATAAG TGACTCGGAGAGCCTTTTCCCCGAAAttgttttggtttggttttatgagC GAAGCTAAATATGTGTTGGTTTCGTCGGTTAAGTTTGACTTTTAATggtt attgaaagttttttactacAGTATTGCATCATGTTTTCTACCAGTCGAAA ATGACATGTCACAACAGCAAAGTGTTCAACCAATTAATTTCCAATGCAGC ATTTCAACCACCCATAAAAGTTTTCgaataatcaaaaaataaatcaattc tTAGAATTCATCCTTGCGCAAAAAAGCTGGAAAATTCATTTGATCCAGTT TTTTCGCTAGTTTTGTCTTATTTCCCATTGAAAATCAATCCAAAATCATG TTTCGAAGACCTTCCAAGGTTTGGTTTTGTGATTCAAGGCATTATAATTT TGCTTGAAGTTATGATACTGATTTAAACTCCatcattttttatctaaaag aaGGAAATACATaagaatattaaaaaaagatacaaaaaatcCAAATCAGT TTtctaaaatcagaaaaatctaaCGACACACACTTCTTCAACACAAAAAT ATCtcacaaaatttgataaattttcagaGGGAGAGTAGAGaaagcttttt ttgaaattcttcattttgattggttgagaaGTTAAAAGACGTTAACACAA TGAAATTGCCAAAGATTCTAGAGCCcttaaaaatagttttgataGACATT CTtatatcaaaaatcttcttttccGATTGTACAAACGATTTtataaatat caaattaaaaTAACATACCTTTAAATGTTGATGCGTACTTTTCACACCCT GTTGGCTTCGTCACTTCCTTTGTTTACTAGGAACCGCTACACAATCTTTT ATGTTGAGCTTTTTCGCAAGTGGgtgtttttcacacattttataaaagcg cgtgtttttttaacattattgaaatacaaaacaaaagcaaattaTGCTGC AAGGAATGTGATATTGCAAAATGATTTTCTTGAACTTTCTCAAGAAATAG AGGATTTCACGATAGGACATCTCATAGGCTTCTTTCATGGGACGCCTTAG TGTCAGTGATATATAAACGCCCTAACTCAGACATCACAAGAACATCTCGT GCCCACTGGGCTGATAGGTGCCAAATAAGCACAGGAtggcaaatttttca aaaattaatatacGCAATTTATGTTTCTCtcttttcttttatgtaatgTT AGAAATTTAAGATCTTGTAGAATCTTGCATATTTTTCCCACCAATCGGCC CGATAATAAAACTTTTCATATTTGCCGTTTTTCTAcgttatggatttttt ttctcatcttcagttACGAACGTTTCTCCCGAAAAAATGCAAGTTTCTTA CCCGTCTTTTTAAccgatagatttaaaaagaaataaaaaattataaccta aattgaaaaaaattttaatttgcatCACATCTTATCTTGAAATTTGCCAG GTTTTACaagaatttaaaacatttaTCTTACGTATTCTTTCGAATTCTTA TGAAATTTTGTCCGAGACAAGGTTTTTATAATGGGCAAAAATTTGTaaga ttttggtaaaatttaatACAAGatcttataaaaatttgttaACAGTCAGA ATTATATAAGATCTTACATTTATTTGGCAAGATCTTGGCAAGATCTTGGA AGATCttgttttttgtaagaacttacaATCTCTTCCAGGATCTTACAAAA ACTTTCCAAGTTTTTTGACCAGGGTAGCCATAGGTTCATTCTTTGGTAGA CCGGGTTGGCACCAATATGGTACTAGTCTAGACTTCAGCATCATAAAAGA TTATCAGAAAAGCAATAGGCGTATAGGCTAGTATGCAATTGTTCTTAGAT AAATTCCATTTATAAATGGTACAAGTCAAGTTATTGAAAAGTAGATCAAA TTGTAAATGTAGAAATCAAAAAGATGACGACAATGAAAAAGGCATTCGTA AAATAAGTTTTTCCGATCTCACTAAACTACCAACTAAGTCATTTCTTTGC CATTTATTCAGGCATCTGCAAAGTTACCACATGCCAAAAATTGAATGAAT GTCTGAAAAGTAAACCTGGAAGAATGGGTACAATGGACTATTGTGCAAAA ACTGAAGATGGAAACGAGACAAAGAAAATGCCAAGAAAATGCATTAAGAT CGCTTTAGCTTGCATCCATTCAGAACCGGAACAAGAAATGATGTTACATT TAGGAGAATGTAAAAATTGCGATGAAGAAAATGTATGTCTTTCGAAAACA GATCTACGTGAATATCAAATCGGAGGGAGAGGGAAAGTTATGAATAAAAT GAAACATCTAGTTTGGATGAAGCCTATTTGCAAAGCTGATGGAGAAAAAT TGTTCGATGATTTGTGTGGTTACCATATGGCAAGATGTGAAGCAGTCAAA GATGATAAGCCTTTACCTGAAGGAGGAGGtaactaattttttcttatctt atcggagtttttgatttttctaaaaaagtgacgcattttgggtttgtttc gcgggtattacaatagaaatctcttaggaattcctcgaggaaattccaca atgcatcgttgttttagaaaaatcaaaaactccgataaggtctattgacg AATATGTGCCAATGGggcttgaaaatctttttattttttccgtCCATATA TGGATAATGGTTTTCAACATAagttccatttatactgaggcggaaaaatc gtctgaggcgagtagtttgtaaaatgtgatctgtggaggagatcctattt attaaaacatgaatggaaagtacactcccccataatgctcattttctaaa ttgctcgtctcagacaaattaattgtctcagtataaatagaactatACAC TCAATTTTCATTGTTCtttacatttgaaagaaaagatTTAACGCTAATTC GGGCTTTAACAAAGAAACGGCCTATACGCCCTATATAAATCCATGTTTTT CCGGCTTGGCGGATCTAACAGAAGGTACTCTATCCAGCGGTATACCCCAT GATTCTTTTTGCCTGAGTACCCTCCACCTCCTCCCAAAGAAAAGAGATCA AAACTTTATCCAAAAAAAAATTGTCATATGAAAAACGTACAGGCACTTAA CAGCCACAGCCAAAGAAAGGAGATCAAAACTTTTCTttatacagttgagt ctccGTAACTTGATCAAGATCACGCATTGGGAACACAAatctgttcgagt taaggaaacattcaagttatagaggttcgagtttaATGTATTTCATTCTT GCTTCTTTTAGATATTAAATCTTGCATGAAGAATCCTTGTATAAAGTTAG ACATATGTATGAGGAAAAACGCCAATAAAAGATCGATCAGTTATTGCTCT ACAGCAACAGGGACAGAGAAAATCCAATTAAGATGTTTAAAGTTGGCTTT AGAATGTATGAAATCAGAACCAGAACAAGAGATGATGTTACATTTAGGAA AATGTGAAAATTGCGATGAAGAAAATGTATGTCCACTTTATAAAGCGATA ATGAAGTTTAAAGTTTGCGGTGATGAAAAACTTGATGGTGATGAAAAGCT TGGTGATATGAatctgtgtcaattcaatgttaAAAGATGCGAAGCTTATA AAAATGGGGATGATATACCACAAGGAAGTAAGTTATACTGTAATTTAAGC GAAGCCAGGATTAGTATTTATTCTTTGACCTCGACAGTGCACCATATAAA GTGGATTAAATTTTAGGTGGATtcattttcgtaattttcgcgaagaaaat ctaaaaaccgatttttggAAATCTAGAAACTTGGCattggaaatgaaaaa aattgggtGAAAGAGAGGCTGATTCAAGTGTAccagtttgaaaaatttta aagtaaGGACATTTCTTTACACATACTGAGGAAAGCAAATTCCAATTAAG CttcgacccaaaaaaatatgacccacgttTTCAAGGTTTTAGATGGGTTT TGTTCAAGGAAGGGGCGTTTTcattctaaaaatgacattatgTTCTAGAG CTTTGTGACAGGAAAATGAAAGGcgaagaagaaaacaaagacgaagaaga aaaggagGAGGAAGAAAAGGAGGAGGAAGAAAAGGAGGGAGAAGATTAAA CCATGGCTAGCAACGTTGTTCTAACGTTCGATTAACATTAGattgacgtt atgaactttagttttgacattttatgcCAGTTGTATGGAATGGAAACAAC AAAGGATCAAGAACTTCAAACCACCACTACCCTTAAACAATATCGTCCAT TACGTAttaaattgtatatttttccCAACCTAttgtataaatatttttat ttttgtttaaggtttaatgttttgatcttaaaaccaaaataaaacaaata attaC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069327TCONS_00069327Clytia hemisphaericatranscript
TCONS_00069328TCONS_00069328Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069328-proteinTCONS_00069328-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_498supercontigscaffold_498:32990..44094 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0.05 0 0 0 0.05 0.03 0.06 0.04 0.12 0.14 0.17 0.12 0.03 0.18 0.18 16.23 15.55 0.2 0.08 82.51 67.83 32.01 46.67 33.62 58.72 0 0.14 1.14 2.59