XLOC_043157 (gene) - C. hemisphaerica

Overview
NameXLOC_043157
Unique NameXLOC_043157
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_496:643921..649482-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043157 ID=XLOC_043157|Name=XLOC_043157|organism=Clytia hemisphaerica|type=gene|length=5562bp|location=Sequence derived from alignment at scaffold_496:643921..649482- (Clytia hemisphaerica)
TTCAGGGGTATACCGGGATGTGAATCGTCGGCCGAAGCTTTCGCCATGGA AGAAATTGATGGAAAATCGTTTCTCTTACTCAGGGTGGACCACATGGTAC AAACAATGAACTTGAAACTTGGTCCTGCCCTCAAAATTGCTTCTTGTTTG AGGGATATTAAAATGGAGTATGGTATTCAAACAAGGACGAAATATTTGAG CTCCCCTTCATAGCATTTGTTTGAATAGGTGCATTTCTTACTGGATGGTG GTGAAAAAGCAAGTCTTTCATGGAGAGAGAGATAGCTTTTCTTCAGGTTA TTAAGTTTTCGTGCTTTAGTTTTGGTAGCAATAGGGCTGATCCCTGCAGG CAATAATTATCAGGTGATATGCTGTCTGTTTCAATGTTGAAAATTGATTC CATCAAATCGGGTGACGTTTTACGTATGCTTATTGGAATTCATCTCATTG GGAGTTAAATAAACCCTGTTCAATCGATTCCTTTCCATCAGGTTAGACCA CAGTTGCTTTGATTTGCACAACTTTTGCTTTGCTTTGGTGCGAAATCCAG ATCAGAATCGATGGCTTGTTTTGCTATCGATACGTTTTGGGATCGCGGGA ACAATACAATATTTCTTCATATTGAAGAACAGTCTCACGAAACAAAGGGA TTCGAATTATGAGAAAAGTGAACTGTTTTCAAACGAAACTCAATTTAAAT CAAAATTCAATCTTCTGGAGATTACTCTGCGCTAATTCAATTACGATATT CAGTTCATAAAAGAGAGAAGATTTCTTTACGAAAATTATAAACAAATGAT ATTTTCTTTTTCTACTCACTCTCTGAATAACAAAGAAAAAAACAAAAGAG AATTTAACAATGCGAACAATGCCCCTGTTTTGAAACACCTCTTCAGCATA ATTCGTCCAATAATTAATCTGCTAAACCTAATTAGAGCGTCTTCTAAATT ATCACTTATCTGTCTGAGGGGGGCTTCTTTAATACGAAGCAGCTGTCTTT TGAAGTTGGAGATTTATTTGTCAGAAAATGTTTACAAGGTTTAAAAAAAA ACTGGAAATTGCTCTGCTGGATAAATTTGGATTTATTTTTGAAAAATAAT CTTTGTATACATAGATCGAGATTTTGATTTGCATCGGATATCTATCAAAA TCAGTTTCTTATGAGAACTGTATCTGTTGCGTAATGATTCGGATGTTAGT GTTAAACAAAAGATTATAATCCGCAGCTCTGCTCGAAATTCCTTTTGTTT TTTTTTCTATTTATCTTCCCAAAAAGGTTAAACTAAATGAAATTTAGGTA CTGAAATTCTTGCTCGATTGGCAATCGATTTGGTGACCCGGTCGTGTATC AAGTTCTCGATGAACGTCGAATGTGATGCGTTTCGTATCGGTTCGAAATT TATCCCTGCTTGCATTCATATTGCTCTTATCCTGGGAAGCATGGAAAGCT GTCATTACTACCGAATTACGTCATCGCGCCATACGGAGAATCACGGAAGG TTGGTAACGTGTCATTGAATTTTGTAGCTTTTTATGTGTTTTTATAGTAT CATATCAATTTCTTTGAATATCATCGTGGCTGACTCTAGTCAGAAAATCT GCCGTATACTATGTTGGCTTTCTGATTTTGAATGATGGTGCTACGATAGG ACTCTACTTTTTCCCCCATCAGAATTATTAAAGGCAAAAAGTAGTTAAGC TCCAGCTTAACTCTTCAATTCGGGGGGGAGGGGTTGATTTTTTTTATTTA TCTAAAGTAAAATTTGAACTTGAACATAGCACATGTAAGTGATATAACTT AAAGTTTGACTGCGAGTCAAACCAATACGAAGCCAGCAACGCATATTTAT ACTTCACGGTTTATGTACCAGTTAATTGGGTCATTTTAGTCAGCTATTAA AACAATCTTTTCGTTCCAGCATTCGAAGCATCAGCCAAATTCGATGAAAA GCTTTTGACAAATGTAAGTGCATAAAGTTTTATAGTAATTTGACACATCA TTAAATTTTCTAGATTTTCCTACTTTCTTTTGTGATTGAACTTAATAGGT CAAGAGATTTTTCGATGGAAATCTATTTTGGCGTAAGGCTGAAAAGTTTT TTAGAGTAGATTTCATCATGCAGATGGGTAGGAAAGTTAAATTTGATCAT AACATGATATTTTAGGATGCGAAATTATAAACGTTTTTAATATCATGATA TGAGTAAGTTAAACGCTCAAAACTTATTATTTTCCTTTCTCTCTCTGATA AGGAATATTTAGTGACGGAAAACTCAGTGGACGTGGAGTATGCGGCCGTG CAACGTTTACGTAAGAAGGTATTGAAAACGGGATGTCATCAACGCAAAGT AGAAGATGTCTACCCCCTCAACACTGACTTCAACAAAGGAATCAATCCAA GTGCATTTCGTAATATATTGGTAATGGAGAAATCTTATTGATTTTTTGTT ATGTCTGTCTGTCTGTCTATCTATCCTAGCTAATTAAATTGCACACTGTT TGATAAGATTATTGTACTTTGGATTAAGATCAAACATTATTCCTTTTTCT CTTTTGTTCTATACTGTATTTACTTGATATTGTGATACCGAAATCACACC CTGAAATACTTCTAGAAATTATTGTTTTGTCGTGGTTAGTCATTTGAACG TAGACTTATTATTTAAGTAGGTTGAATTGGACTTACAGCTTGACTCCTAG AATTGAACTCGTTGAGTATGTATACTCTCAAAAATGACAAAAAAATTGTA ATGGCTTAGTTTAATGTAAATCCGAAAACTTAAATAATATCCTTCAAGTC ATCCGTTGCTTTTATGAGTTTTGTGTTCATTTCATTACAGGTGAGCGACA AACACCAACTTCTGTACTGCATTACACCCAAAGTGGCTTGCACTAATTGG AAACGTGTTCTACTAGTACTGGATGGATATTTTACAGACCCGAATAATAT TACTGCTTCGTTAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNTAAAATTTGAACTTGAACATAGCACATGTA AGTGATATAACTTAAAGTTTGACTGCGAGTCAAACCAATACGAAGCCAGC AACGCATATTTATACTTCACGGTTTATGTACCAGTTAATTGGGTCATTTT AGTCAGCTATTAAAACAATCTTTTCGTTCCAGCATTCGAAGCATCAACCA AATTCGATGAAAAGCTTTTGACAAATGTAAGTGCATAAAGTTTTATAGTA ATTTGACACATCATTAAATTTTCTAGATTTTCCTACTTTCTTTTGTGATT GAACTTAATAGGTCAAGAGATTTTTCGATGGAAATCTATTTTGGCGTAAG GCTGAAAAGTCTTTTAGAGTAGATTTCATCATGCAGATGGGTAGGAAAGC TAAATTTGATCATAACATGATATTTTAGGATGCGAAATTTTAAACGTTTT TAATATCATGATATGAATAAGTTAAACGCTCAAAACTTATTATTTTCCTT CCTCTCTCTGACAAGGAATACTTAGTGACGGAAAACTCAGTGGACGTGGA GTATGCGGCCGTACAACGTTTACGTAAGAAGGTATTGAAAACGGGATGTC ATCAACGCAAAGTAGAAGATATTTACCCCCTCAACACTGACTTTAACAAA GGAATCAATCCAAGTGCATTTCGTAATATATTGGTAATGGGAAATCTTAT TGATTTCTTGTCTGTCTGTCTGTATGTCTGTATGGCTGTTTATCCTAGCT AATTAAATCGCACACTGTTAAATAAGATTATTGTACTTTGGATTAAGATT AAACATTATTCCTTTTTCTCTTTTGTTCTATACGATATTTACTTGATATT GTGATACCGAAATCACACCCTGAGATACTTCTAGAAATTATTGTTTTGTT GTGGTTAGTCATTTAAATGTAAACTTAATATTTAAGTAGGGTGAGCTGAA CTTAGAGCTTGACTCCTAGAATTGAACTCGTTGAGTATGTATACTTTCAA AAATGACAAAAAATTTGTAATGGCTTAGTTTAATGTAAATCTGAAAACTT AGATAATACCCTTCAAGTCATCCGTTGCTTTTATGAGTTTTGTGTTCATT TCATTACAGGTCAGCGACAAACATCAACTTCTGTACTGCATTACACCCAA AGTGGCTTGCACTAATTGGAAACGTGTCCTACTAGTACTGGATGGATATT TTACAGACCCGAATAATATTACTGCTTCGTTAGCTCACGATTTCAATCAA GGATATTTTCGACGTTTAAGCGATTATACACCTGACGAAATTAATTTACG TTTATCAACTTATTACAAATTTTTATTTGCAAGACATCCTTTTGAACGAT TAACAGCAGCTTATAGGAATAAATTCATTTATCAAAATACACAGAACAAA TTTTTCAGCGTCATTTTTGGACAGTTTATAAGACGCAAATACCGTCATCA TAATTCGACGACTACTAAGAAATCTTCAGTAACTTTTGCAGAGTTTGTAC AGTACATTGTTGACTCGCCTCTGGAGGATAAAGAGTTCTGGAACGAGCAT TGGGAACGAATAGAGAGATTATGTCTGCCTTGTTTAATACAATATGACTT TATTGGCAAATTTGAAACTTTGAAACAAGACGCTGATTTTCTTTTACGGA CACTCGATGTAAATGACTTGGTCAAATTTCCGGACGGCTATAAAGGACAT GCTTCGAGTACACCATCTTTGATGAGAAATTTATTTGAATCTTTACCGAA GAGGTTACTGGAGAAATTGTATGAATTGTATAAAATGGATTTCATGCTGT TTGGCTATCAAAATGGTTTTGAATCCTAGACTAAAATATACATTGAACTG GTCCTTTTTTTGACGTCCATCGAAACAGGTTTAAGGCCGTGAAGGCTGAT TAGTAGGCTGCTGGCATCGTTTTTTTACAAAATTATTCACCATTTGTGAT TCCATCGAGGTGCAATTTTAAATTAAATCCCTAGCAATCCCAGTCAAACC AATGAATTGTAACCCTTCTTTCTATGTATATATGTATCTTGTTTTAAAAT TTTCGCAACCATAGGCGCTATCAGCCAAGCGTATTGTGCTTTCGATGTTA TAAAATAGCATATCATGCCGCCCATGAAATGTACTTCATTTTGTATATAC TTCTCTGTATTTTTGTTTTGTACCTAAATTTCATGGTAAAAAGAGTCTTC CACTAAAAACTTTTCTTAGCGCAAACCAATCTATTTTATGTGATACGCTT TAGGATTTTGTTTATAAAGAGTGTTGTAAGTGTTTTTATACAGATGTCAA ATTTCATTAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069274TCONS_00069274Clytia hemisphaericatranscript
TCONS_00069273TCONS_00069273Clytia hemisphaericatranscript
TCONS_00069272TCONS_00069272Clytia hemisphaericatranscript
TCONS_00069271TCONS_00069271Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069272-proteinTCONS_00069272-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_496supercontigscaffold_496:643921..649482 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
CHST13carbohydrate sulfotransferase 13 precursor Homo Sapiens
CHST11carbohydrate sulfotransferase 11 isoform 1 Homo Sapiens
CHST8PREDICTED: carbohydrate sulfotransferase 8 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.55 6.94 4.31 3.11 2.97 2.18 8.51 8.75 5.14 4.08 3.96 3.98 7.27 6.75 5.64 9.04 5.96 5.9 2.52 2.41 5.19 4.92 9.73 7.21 4.07 6.04 3.36 3.45 4.93 5.89