XLOC_042390 (gene) - C. hemisphaerica

Overview
NameXLOC_042390
Unique NameXLOC_042390
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_477:50209..60683+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042390 ID=XLOC_042390|Name=XLOC_042390|organism=Clytia hemisphaerica|type=gene|length=10475bp|location=Sequence derived from alignment at scaffold_477:50209..60683+ (Clytia hemisphaerica)
GGACTGTAATATAATGAATATGGTCTAACCACTGCAGTGTGTatcaaaag tcttttttatcAACAATTATTCAACTAATAAACGGTTCGTTTATTTTACA GATAACTAAAAACACAGAAAATAAGAAATTGATAAGAAAACATACAAACA AAACAATGAGCAGTTATCTGCGGTTTGAAAACGAATTAAATTTCAAACAA CCAAAAGAAGAATTATTTCGAATCCATTATGATAATATATCTAAAGCAGG GTTAACGATTGaggtaagattttttctttcatttgttttgaaacttaaat attttacaatttataTTTCATTATTATTTCTTGATATTCAAGACGTATTC GTAGaccatatttgaaaaaattccgatcaaagatttagcTTGGCCAGGAT CCACTGAGTTGGAATCGAACCTGGAACACCTGTACAAAAGTCAAGGCTTA TAACCagctctttaactcgaactactataactcgaatgtctcctgaacta gaacaagttttctcgtcccttcagttaacgaTGCCTTATAAACTCATGGT TTCTGCCTACTTTTTCAGTCCCTCCTTAAAATCCAATTTTGCCCTTAAAG AAAACTCCAcccttaaatcgaacaaaaattaccGGTACCCCTTGTTAGAA TGTCCccccttaaaatgaaaaaaaagaggaatcccccctcagatttttat ttttagactttGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccaccatggttgggcgacg aagaaaatttttcactttttacaccctcaaaacagcttaaaacgttatct aattggggagaataatagtttttatggtttgattTGATCTGTTAAAGGTC ATTCTAATGTACATAACTTTCAATATAGCATGGTCTACAAAATAGTGGGC ATAAGATTGTGAGCACAAAAACGGGAAAGAAGATATTATTAGAGAAAGAA AACTATTATCAATaaaaccaaatattttggtccccccttttttcttattt tgatagattcttgcagcccttgataaagaatccccccttatttaaaaaaa atgacaaaaatccccccttttttaaaaggcaATTTCTTTGACCtcccctt attttaagggggggggggcagaaacCATGTAAACTGCaatccataactcg aaatttccttaactcgaacaaatttgtgtttcccttgcgggttcgagtta tagagaccaACTGTATTAAATTATAAGGTTGATATTTAGTAAATTACccc ttttgtttattttttcttccATAGGAAAATGGTGATAACAAACGGATCAA TTGTGAAATCCATTTATTGTTGGATGCGGAGGAAGGAAGACACATTTCAC ATATTTCGATCAAGTTGTTGAATGTTAAAGACAGTTGTGCTGAGGAGAAT GGATCCGAGTATACAGTTCAAAATGTTCAGTGGAAACATTTGAATCCTAA TTTTGTACGTTCATTTACGATGATCTTTTTCTTCAGCTGTTTCCCCTTTA ATACACCAGTATAGTCTAGTATTGCTCCACTCACTCCACagtcatacacg tttttttgtcCTTTTCTAATGAGAACATCCAATTTTTGAAGGTCATACAT TTTTTCGTATTCAATTCAATtgtataaaaatgttcttatattcaCCATGT TGTGCGATTTCTaaagaaaattggattttttagACTCCGCGAAAGCTTAA AATTTTGGCCGTCACTTTTTACATACTTTTCCTATGCCTTTTTTTCATAG TTTATTTGTAGTCAGGGTTATATTCGGATACATATAACTTAGACTGAAAC ATTAGACAAAAAGAACCAAATTTCTTTCGTCTTTCTCAACGATCAATATT ATCATAGTGCATCGCATCATACAAGACGCTTCGTACTTAGTACAATAAGt ggtacttgatacctctcAGCTTGAAACTcggcaattaagagaaggatcaa gggtaggtggagcaatccagggagaaagagagCCTTCCCTTCTTAAAGAG GAGCCTTCAGGCagctccgactgcggtcgcagacttacttacctTTTACT TTATAGGTTATTGTTGAAGCTGATTTGAAAGACGCATTAAGAATGCCTTC TAATGGACGAAGCTACCATTTGAAAAAATGCTCAGAGTATCGATTAGTTG TAGAAGTCTCTCATTCGACTTTCGGTGTCATCGCAAAGAAAACCAAAccc ttcaaagttgaaattaaAAGACTTAAAAGAAAACGTAAGTGTTTTTTTCT AGTTTTGTATTTGCCGATGTCATTAAATTAAAGTTGGGTGAAAAATCAcc tatgatttttttttctacagtgtGGAAACCGCTTTAAATGGAATGAATCA TGAAATGGTTTTCACATGTTAGCAATAAAAAGCGCATACTTAAAGCGAAA TGAATTTAGAAACATGAATTTTAAATTCGTAGTTCTTTTGATGTTTCTTA ATGAAGGTTTCTTTGACAATTAGATGTTAGGCCATGAAATTTATGCATAG TTTATAAATCTAACCAACTACAACTAGATAAGTTTGGCTGTTTTTACCAT GTTGATATGTAACTAAAGTGCTAGaactaaattatttttcaatttaattt ttcttctacCAGGTAAAGATTCCCACAACGATTTACTTGATGTTTTGCCG CCCTCTCAACGCCCACGATTACCCCTCAAAGAAGAGTCTCCAAAATTATT TGGAGATTGCAACACTCGCTCACCATCTGATTATCGTGACTATTGTGGGT TAATTTAACAGTttttacattgaaaatgttttaccacagtCTTTACATTG AAAATATCTTGTCACACTCTTGAAATTGAAAACGTTTTAGCAACTTAAAC ATTGCAAATGTCTTATCACAATCTTAACATTAGAAATGTCTGATCGCAAC TATTACCCACAACTTTCTTctcattgaaaatgttttgtcaCAATCTTCAC ATCGAAATTGTCTGATCGCAACATTTACATTGAAAATGTCTTACCACAAC TGTTAAATTGAAATTGTCTGATCGCAACCTTTAGCACAACTTTTACATTG AAAATGTCTTACCACAACTGTTAAATTGAAATTGTCTGATCGCAACCTTT AGCACAACttttacattgaaaatattttaccacGCTCTTGACCATGAGAA TAGTTCACCCcactcttcacattgaaaatgtctCACCACACTCTTGACAT TGATGAACATGTCTCACCACACTCTTGACATTGATGAAAATGTCTCACCA CACTCTTGACATTGATGAACATGTCTCACCACACTCTCGACATTGATGAA AATATCTTACCACAATCTTAACAGATTGAAAATATCTTACCACAATCTTA ACATTAATGAAAATATCTTACCACAATCTTAACATTGACAATGTCTTACC ACACTCTTAACAATGAAAATATGTTTTACCACACgcttaaaattgaaaat cttttaccatAACCGTACCATTACATTGAAATTGTTTTACCAAACTAACG ACCTTAAGAATGTCTTGCATTACTCTCCgcattaaaaatgttcttttaag ctgaaattattttatacaatccctttaaattttttttttctctgacaGTT GGAAGTTCACCATCAAGTGGAAATGAATCATTATCAACATCATTCGGATT GTCACCTAAGAGAGAATTCTCTCCTGCTCTTTCTTTATCGCCTCTTGCAT CTCCGGGTAAGTTTTGTATACGATTTTCTCTTGTTATCCGAAGACATTTA TTCGGCTaaaacgtttttataagaacaagctttATAAGTAAAGGCTTATA TGACTGAAATTTCGAGACCAAATTACTCTAAGGCCCAGAATAGTAGGGGT ATCCAATAATATAAACGTATAAACGTATTAATANGTCCAGAATAGTAGGG GTATCCAATAATATTAACGTATAAACGTATTAATAAACGTGGAGATCCGA GATTGCACCTCCGAAAACCCCAAAAGGAGGTAATTATAAGCTAAAACCAG GCTAtttttaagggcagaaactttcgtgggcagaaactttcgcgtttatC GCGGTTTTGATCCtttttcgcaaaagtttctgccaggtaagaaataaaac ctgaaaaacgcgattttttttttttcacgaaaaataaactttcctactca gttttgcactgtttgctaaatttttgcgtgttttatgagtttttgttaca aaaaaaggtaaattttatatgaattcaTAAAATTTCGGCTAAAACCATAA TTTGCGAAACTTAAATCGCTAAGTTTTGCGACTTTTTGACTTCTTTCTGC CCACGAAACTTTCTGCCTTTAAAGTAAGTAATTAGAGCAATTCTTAGAGC GTCGTAGCAGTATCGTATAGGGAGTTTGTTATGTTGACggcgactttcaa tattatggaataatggagtgtatcgaatagtagaaccaCTTCGTTTTCCC CGTTAAAGCATATACACagaaaactaaacaaaattcttcttattattttt ttcctttcagATTTGGATTGTAGCACTCTGATTACAAACGaattaaaaac aaaggagttAGAAGTCGACGGAACTTTCATGGGGAAATTTCTCCAAACAT CTAACGCTGATATTGCTTATCATTTCCGTCTCAATGAAGACCAGCTGAAT TTTGAAGAAGGAGAAATAGTTGGATTTGTGGGGTCTGGGGACGAGCAACG GGTAGTGAAATTGACACTTTGGAATTGTGTTGATGTCAGATTTAAAGGTG TAGTTACACGACAACAATATCTTGAAGCTCATCGACCCAAAGACCGTAAG TATGACGCTCATTGACCTCAAGGGACCTAATTTTGGCGAGCTGAGAAAAT CCTAAAGAAACTTGAATTAggttaaaattgatttttggtgaaaaaccAAT TTTAGCGATAATTTTGACGAATTGAATGGATGCGACatcggtattttttt tttgtctaaaaatgaGTGTTTTATTACCGGGTTTATTCTAGATAATTATT ATACTCGCTGTAATGATCGGTGCCAGTGTGGATAGCACACTGTAAAATCA CATTAGCATCCTCGTCATAATAGAAACACTCTTCCAAAGCTATGCATGTT GAGTGTGTACCTTTTTGGCTTTTATGGGGAAACCATCTCAGCGTATCGCA GACTTATTCTCTTGAGTGGTTTCCACCTTGACATtgtagcaaaaatgagt gccTGATTATTATCGTGAAGACACTTCTATTTCataagttttttctttta tcatatTTTAGCTTCAATCAAAACAGAGACAATCTGTATGTATGGTTGCG TACCAGTACGTGTTCACGGCTCCATTGCGGCGAACGACCCTCTTTACGCG TCGCTCATACGTCCTGGATACGCCGTCAGTGGGAACAGTTTGAATAGAAG TCAACAAATCGAATCTGCTTTCATTGGAACTGCGATTTCAAGTTGGAGTA TTGATGAAGAAACTGAATCGGTATACTATAGTTATGTTTTACAGTGTTTT TCTTTCCTACAGATATCCCTCTACACACTAGATGGGCTAACTGTTTACAG ATTTCTTGTGAAAGTGTGTCGACCAGTCCGCCGTTTTGTGttctgttctt ttttctttctttttttatcaaattttcaactATATCTACTGGGAGGGTGT AAATATGAtggaaaattttctgaaaattaataAGTGAGGGGACGGTTATT CGTGGACCTTAGAGTGGATCCTTTAATCTTNaaaattttctgaaaattaa taAGTGAGGGGACGGTTATTCGTGGACCTTAGAGTGGATCCTTCAATCTA ATTTTTAGGATGGTATCGTCAAAGCCATGGTTTCATTGAACGATAATCTG AACCAGCAGAACGCTAATCAAAGAGTGACCAAAATGGGAAAGAAATTCTC ACGCAaattacaaaaagttgaaaataaatcgaaaaaatggcgaaaacgta agtaattcttttaaaaacaaacaagtaAATCTTTTAATTATTTGCTTTTG TCATGATATAAAGTCATCGCTTTATTACTCGACGAGTAAATAGTCGGaat cattgagtttgaagccccaaAGGAGAGGAATTTTAAACCTTTCACAAGCA AAACAAAGTGCAGCCTTTTAGATTTGCCCCACATTTCTTAATTGAGCATT GTTATCCAAAAGATCTGTAACCCGAAGTCCTGTTCCACATTTCAAAGTTT CATAAACAAGGCTTTCCAATATCTGCCACATCCTCTTTTGATTACAGTGT AGAATGCCAAGGTGCCCTTCGTTTTCTGGTTCTTAAAAATTGCTTACTCA AATTGCACCAAAAATAGCCCGCCCGGCCGTTTGCAGCAAGTTTTACTGTT TGAATTTAAAACTAGAGGCAAACATCCGGTCTTTCATGGATGCTTCCGTa tgaaacattacgtcatgaatatcacgaattgtGAATATATGCCTTTTCAA CTTGGACATCGCTTCATTTCGTAGATTGTGACGTCTTAGGCTATAATAGC ATAGTCTATAAAACTATGAATTTGAAATACAGTCGTATTATCTGTACTTT TCTTTTCGTTTCACAGGTTGTGTATGTGTTTCTTCAATTGTTCTCGTCTT AATGATTCTTGTTGTAATCCTCTTATGGCAAATCTATGTTCCCGGTACAG CATACAGATACTGGAAGTGTAGAAAGGGCCATAAGGTTCCTAAGGCGTCc gcaaaatttgattttattccgTACCGAGACATGTCAAGGGTAAGAATTCT TTCTATATTAACCGTCTTAAACTACAATCAATGCAGTTATTATGTTGGTA TTATTTTTGTGTATCCCGAAGACAACTTCTTGGCTTTGCTAAGAGACTCC TTTAGCCTCAAGGTCCCCGGTGATTGACGAGTTCTAGAGCGCCGAATCCA ACTATTAAAGGGAGGGATTTTGcgcaaaaaaacatgaaaagctaTGGAAA GTGTTAACTGCCAAATACTCCAAGActgatttcatttttaatttgattac ACAGATATTGATATTTGTAATACCCTGGTGATCCAGGCTAAATTGCATGA CCATAGATAATCACTGTAATTAAGATAAAATTCATTAAGAGATATAAGAA GTATAAAGGCATGCAGTTTAATGGCTGTATAATCATACAACATTTATGTT TCTACCCTTAGAGAGTAAAAAGTTCTGGGCTGGAATTCGCATTTGAAGAA ATGGTAAAAAAGATGAACTTTAAAGAAGGGACGATGAAACCAGTCAATGA GGAACTGGTTCGTAAAAATTATCCTGGTGTGCTCCCAAAAGGAGTTGGTA AGTCAACAATAATATAGAGCACGTTTTTATTATTGTTGTGTTTTAGCCGT ATCCCAAAAACTCGAATActtcaaaacacgcaaaaatcttcgagttatga agaaaTACGAGCAGTGGCGGGTCTAATTACATtatatttttattgcattt ggaaaaaaatgtcgcaAAGTAGAGTAGACTTTTTGCGTAGAAATAAAGTT TTGACGTCCAGTATGGGCTATCAAATAagatgtttttattgaaaagaact aCTGTTGGACGGAAATTGGAATTTGTAAGGTATTCATTTCTTTCTTAGGT ATTCGGTATTACGTAAACATAGAGCGCTGTGCTTACGGTGGTTCCTATAC AACAAGCTCCGCCTCTGGACAACAAGAAACAATAGGTGGACCCAATGTCT TTGCGGTGGACACTCAGTGTAACCACGTCTATTACCACAATGGATTGCCA CCTGCTCACTGGAAACCTTATAACTCAGCCAGCTGGGATACGTGGCATAA CGTTTTTTGTGATCCGCCCCCGGTGAACCGTACATGGGCGGAGCCAACGC CCGCAGTGAAGATTCATCAATAAGAAAGTTGAAAGTTTGGAACAgtgttt tattatattatatttttgttttaaggCATACCTTAGGGAAGTAGCTTTCG CAAAGAGAATTTGGGTgaataaaacttaattttttcggTATCTCGAGAAT TTAGTTTTGACAGAAAGAACGCATTATTTGGTGTGACTTTACAacatttc acttttttcaatatttttctttgataTTAGATGAAGTTAATGAGAATAAA TTAAACAcgcttgtttttataagaacgtgtAATGGCTGAGCATGAGATTG TTCTTATACTTCTATTGTTCCAAATAAAAGAGCTCTTCTTCTGAGGGTCA TATTGGAGgctggtgttcttataaaagtgtttttataaataaaaaagggT GTAACTTTTAAAGTTCTTTATATTATTTGTATTATTCAgaatttcttatt ttaaaagtttaattATTTTTGTTGTATTCTGGCAGGCACAGAATTATTTA AATCTTTATTCTTTAAATATTATTTGATAAttgcattttctttttttttc ttttttgtgtaAATAGTTGGAATTGATCCTTTTCACTTGACATTGAatac ttttgatattttaatccttaaattttgtattttttgtgtgTGTTGTAAGC TTTTGTATTATAGACCtcaatttctaaaaaagataaCTTGATTATTTTAG TAGTATATTTAAAATTAGAGCAATT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067866TCONS_00067866Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067866-proteinTCONS_00067866-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_477supercontigscaffold_477:50209..60683 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.79 2.3 0.97 0.84 14.78 10.15 13.29 14.83 22.9 50.93 45.06 27.07 31.56 24.71 19.8 23.49 7.08 9.47 23.85 36.12 7.4 7.28 10.19 13.78 19.96 19.7 91.77 91.5 65.14 50.72