XLOC_042209 (gene) - C. hemisphaerica

Overview
NameXLOC_042209
Unique NameXLOC_042209
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_471:129362..135920-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042209 ID=XLOC_042209|Name=XLOC_042209|organism=Clytia hemisphaerica|type=gene|length=6559bp|location=Sequence derived from alignment at scaffold_471:129362..135920- (Clytia hemisphaerica)
AAAGAAAAAATAGAAATTATTGAAGAATTGATTTGGATGAATTTTGTTGT GAATTTTGATTACCAATGAACAAAGGTGATGACGAGTATCGATACACTGA TGATCCGAGGTCTTCGTATTGGAAAGCATAATATCTTATTGTTAACTTTT GTCATCTTTTCATGGTTATGTTTGGTACAATATGGGGCATGCGCAAAGGT AAGTGACTTTTTTAAACGAACCTTCTCGAACCTAGTCGAGAAAACCTTCT GAATGAAGAAATCACAGGAATGGAGAATCACATGTGTCAAATGCCAGCCT TTCTAACACAAGAATACGTAGGGGCCTTAGAAACTGAAACGTTGGAGTGG GCGGGGAGGACTTTGTAGCTACTGAAACTATAAAATTGTACATAAAAGAC TTTTCAAAAGGGCATACAGACAATACAGGCGAATAAGTGAATTTTCAAAA AAAGACCGCTTCCGATAGAGGCACCAATTACTTTTTATCAACCTGGATCA GAATAAGATCAAGAATCTTTTGCATTTCAGGTCAAATGCCAGAGTGATGC AGATTGTTCAAGACAAGGTCTACACGATCATTGTTGCGTTAAAGTGACAG AGATGACTGGAGCATGTCATCCCAATTTGAAAAGACAACAAATATGCCCA TGGCCGCCCAACTCTGTCAAGGTGAGTGTTGAATGACTTTTGAAAAACTT TTACTCTAAAAGATTTTGTAAGTGAAGATTAGAAAAAATGAATTTCTTTC GTTCTTGACTAGTTGATTAATTTAGAAAAGTTTTAACTATAGAAACTAAA AATGGTCCAAGTCTAATTCTTGATTCTAGTCAACTTAACAGTGACAGGTC AGACGAAACTTTCCAAAATCGGATGCATTTTATTTGTAGGTCATGTTTTC ACGTCTGCTGTTTTCAATAGCAGATTATGTTTGAACATTCGAAAATTGAC TTTGATGTGTTTGTTGCCTTGGTTCCTGTCAAACACTTTGCGAATCACAA ATTTTCCTTGATTAAAACTGTCATTGAAGGCATCACAATTTGCTTTAAAT AGTAACTGAAATGGATTTCTATTTAAACTTCAAGTCAACTTTTGATACGA GTAAAATTCGACATTGAATTCGACGCTAGATTTCAATTTCTCAATCGACA GTACTGTTTACCCTTCATAAAGCTTTGAACCTTGTCAAAACCTAAAGTCC TGCCCTCAATGAAAAAAAGCAAGGAAATTGTTGGAATATTTTCATGCGAT AGTTTGTTTAACTGTACTACCCCTTTTCCTTTTTGATGCAATTAAATACG ATTTAACCTTGCTGCAACCTTCCCGGAAATCTGACACTTGAGGAAATTGT CATTTTTTTCATTATTTTATTAAAAGAAAGTCAACAGGCACTCAAGTATG ACACGAGTATTTGCTTCGGGTTGGACGAAGCTTGGGAAAATCTGTAGTTA GTTCTGCTTGGTTAGAGTTTTTTTAGATTATTGTAATTCACAATTAAAGA GTATAAAGTAGGGGGCTTTGATTTATCTGAAAATTGTAACATGACAAAGT GAGATACCAACGTGTTGAAAGCACTATTTCTCAGGCCATATTTTTTCTTA TATTGATACTCTATTTATGTTTTTTTATGTTGAAACTTTTCGGGGTTGCA CGAGACAGGAGATCTTGACAGTTGTGTTGAGGTTCACGGTTTGAAAGGAT GAAATATTTGTAACTAACGCGTTTTGTATCTTGTGGTTAACAAGACGTCC TNCAGTTGTGTTGAGGTTCACGGTTTGAAAGGATGAAATATTTGTAACTA ACGCGTTTTGTACCTTGTGGTTAACAAGACGTCCTTACTGTCTACTGAAT ACATGATACCTGCTCTCTTGCTCTCATTTACTACCAATACACCTCTTCAT TTGATAAACTAGTCTAGCTTACTAGTCTAGCAAGCTAGACGACTAATTCT GACATAGTAGAAATAAAGCAAAAAGTAACGGAGGGAACAATTTTAGTTTA TACAAACTAAATCCCGTAACAATAATCGTATTATCATGCCTATACTACTG TATTACACGCATTACAAACGACTCCGGTCTATTGATAAACTTTATGAAAC TGAAAAAGCGCCATTTTTTTTTGAAAGGACATTTGAAGATTTTGAGTGTC AATATCAGATCTTAGTGACAGATTTTCTCCATTTTTATGATAAAACATTA AAACAGAAACAAAAAGCACCAAACTGAGCAGACAAGCAGCAAGGCACAAA GCTATCAGACGAATATATTGACAATCATACACGTTTTTTAGAAGAACATC CGAAATTTTGAAAGGCTTCGAATGTTCTTAGCTTTTTGAGTTTTAAACCT TAAAATGTTCTTAAAAGGTTCTTGTTTTTACCACTTTATGAGTATTTTTG TGTATTTTCCTAAATATTAGGTGTTTTAAAGTCTGCAAAGCCTTAAAATG TTCTTAACTTGTTCTTAATATTTTGGCCATTGAAGCCTTATGTTCTTATA TAGTTTGTCATTATAAAAACGTGTAAAAGAATGGGCAGAGATAAAAATGT CATGGGCTGCAATAGGAAGAAGCTGACGTTAATTAATTCTTTTACATTTC TGCAAAGCCTTAAAGTGTTCTTAACTTGTTCTTAATATTTTGGCCATTGA AGCCTTATGTTCTCATAGAGTTTGTCATTATAAAAACGTGTAAAAGAATG GGCAGAGATAAAAATGTCATGGGCTACAGTAGGAAGAAGCTGACGTTAAT TAATTATTTTACATTTTTCTGTTCTTATTAGTTCTTGGAATTGAAAACAG GCAGTATTGTGCGAAATAAATGTTCATGTGGCATTGGTTTGACCTGCACC AAAGTTGAACGGAAAAACTGGTCCAAAAAGATGAAAACTTGGTCCAAACA AAAGATGAGAAAGAAAACACGTTACAAGTATAAATGCAAGGAAATACACG ACGAACCAGACGAGTTCTTCGAGAGACGTGGAAGATGATTGGCTGATGGA AACGAGTGAAATATTTGAAAGCGAGGCTATGGTTTTAAAAAGAAATTATT AAAAAAAGAAGTAGTGTTTAAAAAAATGTTATATTGCACTTATTATAATG GAAGAGAAAGAATGGTTCACACTCACCAACAACAACCACTTATGCTGCGC AAAGGCTCATGGGAGATTTGATCGAAAAATGATGTCCAAATTCGCAATGC ATTATCACCACATGTTTTTGTTATTCCACAATACACCCTAAAAAAGATGA ATTCGTTTTATTACGTTGACGACATAAAATGGTCTATATGCAGGCATTTT ATCAGCACCTTAAAGAAGACAAACAAAACATCAAGTCCAACTAAATGGTC AATATGGTTATTGGTTGGTTACTATCCGTCATCTGAACATTTTAATGACT TTGCACGGTGAATGCTGGTATTACCGTTTTGGATGTTTCAACGAACGAGA AATTGAAAAATATTCAATGTTTCGGAAAAATAATAACAAGATAATTTACA AAGACAAGAGATTTTAGTTTTAAAAAGAGAATTAATAATTTCACACCTTT TTGGAGTTGAAAATTAAAAGACAATAACGTATCAAGTAAATAAAATGACA AATTTTCCACAATATTGGGAATGGATTAAATGGGAAAAATCTGCAAGCGA ATTTTGCCGAAGATCGTTTTTTAGGTATTTGCTTGCTTTCAAGATGAAAC TGATTGACGATCATATAAAAATATTTTTTTTTGCTTTAATGACTCTGCTA ACAGTTTATGAAATGGAAACCTCTAATGCTGAGTGTTTTCTATACTTTTA CTACATTTCTGCGGCTTTCAAAGGATTTTATCCAACATTCTCTCTTCTCT CTGATCTCTCGATTATTTCTTGAAAAATGTGTCTTTCTTATCTCTAGAAT GTTCCAAATAGTCTTCCTTCTTAGATATCATAAATTGCTACATATCCAGT TTTTCATAGAACTTTCTAAGCGGATTCACTCGTATATTTTCCCGCCAAAA ATCGAGTTACACAATACTCTTGACATGCTGACAGATCTTTGAACAAACAT GTTTAAAAAACTTAAGTTAAAAAAAAGAAGGCGGGAATCTTCAAGATGTT AAGGTCTACGCCACATCATTTCAATGAAAAATCACTTTTGAAATTCTTAC GTTTTAAATAAAAAGATATTTCGTGAAAAGGTTTCCAAAAAACCGAGAAT GAATTAAAAATTTGAAAATATAGTTAACGCAAGGGATAAAATTCAGTTTC GAGGCATAAGATTACGTAATTTTGAAATCATCTCTGTAACCACAAAATCT ATAAACACCAAAAAATCGACGAGTGAAATTTCAGTCTTTGGGTTTCATCT TAGGTTTTATGTTGAACTAGAGACATTATTAGACTTAGACCTAGGGCGTT AGAATTGTATAGTATTGTCAACCACCGTTTGTCCACTACTTGACGTGGCA AAAATAGTGTAAAGAGCACGCACTACGTTCTTCTTAAAAATTGTTGACCA AAAAATAAAGTATCAAAGACTATTTAATAAGACTCTTTCCTTTATTGCTC TCAACTATAAGAACAAATATATTTCTCCTCCTTGAGACAAAACTGCTTGA AAGTTTAATACTAGAAGGCGTCTTCATCATTTTATAAAAATTATATCACT TAAAAAGGAATTCAATTTCAAGTCGAAAATAAAATTTTCCTAATTATTTC GTAATAGCTTCTAAGTTGAAATTTTACTTCTTTTAATGTTCCCTATCTTT TAAGGTCTTTCTCAGCTAGAACATAGTCGCTTAAATATTTAAAATGTTCT TTCTTTAAATTCGTTTTTGTCTAGACATAAACTACAGACCATGACTCAAA GGCTGAAAGAATTTTTCAATCTTTAATGTGTAATTCTCAAAAAATTTAAA ACTTAATTTAAAGGATTATTATATTTTCTCACTTTTACGAATTATTTTTT TTCTTTAATTACACTTGTCAAAACTACAGATACAAAGTATGGACTACTTT ACTCTAAACTTTACATCCTTAGTTTTAAATTTTGGTTAAATGATTAAACT TGTTTATAAAAGTGAGAAAATTTGTGTAGCCTTTAATCGAAACTTTTTTC CAAAATGTGTGATTCAAAGGAATTGTCTTTAGAGGGCGGTAGCTTTGTAT GCCCTCTCATCGGGCGCCAACGAAAGATGAATGAAGTGTATATTATTACA GTAGGAAAATAATCAGATAGAATGTATTTATATAGATTTCATTTAGAGCA GCCCCGTGAAATCAATTTTACTGCTAAACTTGCTTGACCGGACCATCATC CTCTGAAATCATAGCAATTACTCAGTCAAGCAAATAGTGCTAATGAAATT CTAGATAACTTTTATGTAATTTCTATTATTAAAAAAATATTTTAGTGTAA ATTTCATTTTTTTATTTTTTTGCTTTTTTATTCATTTTTCAATATCTTTT TTGTTATGTTTCACTGTTTTCAGTTATGTTTTGCCCCTTCCAATATTTGT GGTCCATTTTAAAATGGAGAAATGTTGTGCAATATTTGAGATCTTGATGT TGTGTGAAAAATAGAATCTGTTTTTGAGTAAAATCCAATAATCTAAGCTA GTTAAATGTTTGGTAAAATAGATTGCTCAATTTGCTCAATTTTCTTTCCC TGAAAAATTTGGACCCGAAAAAGCGAATGTATTATAATTTATCGTAATTT ATTTATCTCGGAAAAACATATTTATAGTGTTCCGTTGTTTTTGTTTTGTT TGTTACGAATTTTCAAAAACAAAAAAAACTAATAAATCTAAAAAAGGATG ACTTTTGAACTCTCTTCACCTAGTTTGAGAAAGGTCCTACTCTTCAAGAG GAAGGCCAAAAGCTATTCTGTAGACTAGGTATTTGGTCCCTCCAGTCAAC TTTGCATGGGTGTAACAACTTCTAGATATAGGCGTAGTATGAATAAAATG CGGCTATTCCAAAAAAATATTAACCTCCAATGTTGAGCGGATGTGAATTC TTGGCTGATGTTCAGAGAACTCGTAATATATTTGTAATATCTTAAAAGTA CTCACTCTCATGCATTGGACTATCTGAATTTTAGAGGCATTCTCTGGGCT TTTGCTTTTTTGAGATCTCCACTGGAGTTCATTATTTTAGTGGCAGCCTC CTTGACGGAAGATATGATCTCCTCAACAAAGAGGATTTTTTTCTCAAAGT AGGGGAATACAATCATGAAATATTTTTGAAGCCTAATTTTTATTATTCGA GGATAGACAATAAAGAGACAGTGCAGGTGGATATTTGACAAATCGTCGCA GATGTCTTCAGGCCCTTGCGAAGCGAAGTAACAAACCCAACTAAATCAAT GACGTCAAATTGGGTCCCAAATCGTTCAGCCGTCAACATCACAACAAGCC TTGTTACGTCATATCCCAATAAACCTATTTATAACCCAACAATTTCAATC TCATAAATCATGAATGTTTTGTACGTCAAAACAGAATTGAAGGCTACTTC GTCGTTTTTAAGTTCCTCAATGTCACGTTAGAATATAAAGAATGCTGCTC TGATTCACC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067597TCONS_00067597Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067597-proteinTCONS_00067597-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_471supercontigscaffold_471:129362..135920 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (0 tpm) - - (28.97 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.18 0.08 0.42 0.62 0.01 0.02 0.1 0.11 0.09 0.04 0.03 0.13 1.08 0.91 0.03 0 5.87 7.16 2.44 3.1 28.97 28.69 14.74 23.34 15.24 15.4 0.71 0.49 0.37 0.42