XLOC_042001 (gene) - C. hemisphaerica

Overview
NameXLOC_042001
Unique NameXLOC_042001
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_466:451787..453585-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042001 ID=XLOC_042001|Name=XLOC_042001|organism=Clytia hemisphaerica|type=gene|length=1799bp|location=Sequence derived from alignment at scaffold_466:451787..453585- (Clytia hemisphaerica)
TTAGATTTTAATTAAATAAAAAACTCTAAAAATTATAATGGAAGACTGGC
GTTGTGAAAGTAAAGTAAAAGAAAAATCAATACCTTTCGAATTTGATGAA
AATTATTGTGACGTCATCATTATTACGAAAGACAGAGAAATCCATTTACC
GTCAAGTTTCTTGGTTTCAAATAATGGGGGTCAAATTTTCAGCACAGGAG
CCGAAACAGAAGAATTTTCATCTGAAGACGTTTTAAGGGCGTTATCGTTT
TACTACCCGAAATATTGGACATCCCACATTGAATGTATGTACCCTCAATT
AACATACCCCTATCGCTTCTTAAGTTTTTTATTTTCCTTCCACCCCCTTG
ACCTTAGGATCAGTAATGTTTAAAAANTCTCAATTAACATAACATAAGTT
TTTGATTTTCCTTCCACCCCCTTGACCTTAGGATCAGTAATGTTTAAAAA
TGTTTTTAGAGGTCAAAATATAAAAAACTTGTTATAATTGGTCCAAACAA
CCTGATTTTAGTTTACATATTTTACATTATGTAATAGTTATCGGACAGTT
GCGAGTAGAATATGAGAAATATTTTACGAGTTCCGAGATTTTTCCGTTCA
ATAATTCCCGAACCTTCAGGCGAGGAAAATATACGGAAAATCCGGAACGA
GTGAAATATTTCCATATTTTACGAGTGGTGATCCAAAAAATGTACTTTTT
GTGTCGGAAAAAGCGCTGGGCACTTCTGTAGCAAAGTGACATTGAATTGC
TTCTACCGCTAAAATGCAACAACATCTATTCGTCAATTTATATTTTTTAC
ATGTAAAGTACAGGATATATTGTACTCTTTTTAACCAATCAGATTGCAGA
AATTTTTCGGATCGCCCTTGTTCAGCCCTTTTCCCTGACTGGGAGTCCCC
CCTTTGATTAGAGTTTAAAAGATTTTTCCAGTGCCCATACACTTATCAAA
TTTGTGTACTGTACTGTTATTTTTTAAATACCAAGTTTGGTTCAATGACA
CTCATATTTATTCAGCTTAATTTCATATCAAATTTCTTCAATTATTAGCT
GTAAACTTTCTTGTAGGTGACGATTTGGACAACCTGCTTTCGATTGCAAC
TACCTTCAAAATGACAAAATTTCAAGTCTTTCTAGAGAAACACATACAAT
CTGACTACTTGAATACTGTACTGACACTGAGTTTATCAATGATTCCCTGT
TAACAGTAGTATTTATTGCTCAAAACACGGTCTTGATAGCCTTTTTAGAA
AGATTTTAGCTAAAAAGTTACCTTTAAAGAATCTATCTCAATTAAAGCAG
TTTTNACACTGAGTTTATCAATGATTCCCTGTTAACAGTAGTATTTATTG
CTCAAAAACACGGTCTTGATAGCCTTTTTAGAAAGATTTTAGCTAAAAAG
TTACCTTTAAAGAATCTATCTCAATTAAAGCAGTTTTCTTACAAGNAAAA
CACGGTCTTGATAGCCTTTTTAGAAAGATTTTAGCTAAAAAGTTACCTTT
AAAGAATCTATCTCAATTAAAGCAGTTTTCTTACAAGATGTTAACAAAGG
ATGTGCAATTTGAAATTCTAACGTTTACTGTTTTAAAAGAAGTATTAAGA
ATGGACAAAACAAAGCTAATGGAAGCTCAAGTCATTTGTCATTTTCTTAA
ATTGGTCCAGAACCATGAATTACGCCTGATTGATGTTAATGGTGATGCTG
CAAATATGTCTTTTGATGTCAATTTACCGTTGGAAGTCGTTGATCTAGAT
TCAATATCATGCAGCAAAGATTCGAAAGATTGTATCACTTTGGTTATCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067233TCONS_00067233Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067233-proteinTCONS_00067233-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_466supercontigscaffold_466:451787..453585 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.4	0.3	0.35	0.44	4.38	2.9	2.88	2.27	1.04	0.87	1.07	0.61	0.47	0.42	1	1.61	0.69	1.18	0.09	0.54	0.76	0.5	1.76	1.33	0.42	0.84	0.66	0.26	1.22	1.24