XLOC_041984 (gene) - C. hemisphaerica

Overview
NameXLOC_041984
Unique NameXLOC_041984
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_466:435691..439369+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041984 ID=XLOC_041984|Name=XLOC_041984|organism=Clytia hemisphaerica|type=gene|length=3679bp|location=Sequence derived from alignment at scaffold_466:435691..439369+ (Clytia hemisphaerica)
TATAGTCTTATAGGGGATCATAATAAAAATTATTGCGTTTTGAACGTCAT
TGAAGAAAATGGCTTGCATCGAAGGAAGAGTTCTTGGATTGACAAGTTTC
AGAGCAAATTTGGTCGTTGAGGTATTGAAACATTTATATTCCCCTGCCCA
ACAGCCCCGATGGAACTTCTTCCCACAATGGAGATGAAAATTACTAtaga
aatcccaatggggatagaaattctattgtttccccagttaaaaaatccag
tctGCAATTTTTATTTCCATTGAGTTTCGATGGGGACGGAAACAAAGTAA
ATTTTCCAGAGGGtaggggtcccaccgggtcgtGACACAGGGGTTTATTT
ATCATGTTATTCTAGTTTGCCAGCATCCCTCTGAGTTGTTTGGTTATGAC
AATAACTATTCCCAAGACATGCGCGTAGCCGACATATCATTTTATAAAGA
GCGGTTCATCACGAATGAACTTTCCTAACAAAATTTCGATCTAAGTAGGA
ATGAGTACTAAGCTTAATACATATTATTGTATAAGCAACCAGGTATCTAA
CAGTCTAAGCCTCAAATTTGCCGATTTTTTTCACTATCTAGTAAAGTAGT
ACAAAAAATACTAAGCAAGAATAATAATAGGTAGCTAGAAAACTAAGTAA
GCAACTCCGAAAcccaaaaattggaaatcttcaTAAAAAATGTGCAGATG
ATATTTGGTACCTAGGTAAATTGATTTAAATTATCTCACTTTTAACTTCT
ATTTCAGTTTGTCGTCGTCGAAAAGACTAACTCATCAAGGTCAAACGAAT
CATCCATTCTAATTGACTTTCAAGACTCTAATTGCATAAAAGAACGCCCC
AGTCGAACACATTCTTTCTTCAAGGTACGTGAATAGCTGGGGAATAtatt
ctggggaattcgtaaatagtaaactgcatactgatacagtctgctagaca
ttaataaggtaatatttgctcttcatatttgattctttctacagtgatta
gattgacacatgcgcgataaaatttctattattggtcttcagaggttaat
atattctttgaaaacttaacctctgatactcaggatAGGTACGATTCGTT
CCCGAAAAAGGAATTTTCCAACCAAACTCCTCTTCCGTTTTTTAGATACA
TACCACGCGAGAAACATTCGAGGACTTGGTTATCCCGAACTTCAATGTTT
GGAGAGACGTCAGGAAATCACAAAAGAATGTAGAAGAAAAATGCAATCAA
ACACAAATCCAACAGAGGTAAACCTTTTTAAGGCCTTTTAGTCTTTATTG
TGcggaatattttatttttcagagctATGATTACCTTGAAGGATTAAGAA
ACAATTGTaataattttcgttttttagaAACCTTATCACAGACTCGGTGG
GACCCTTCCCCACTATGAAAAGGTTTGTCGAGAAAAACACCCTGAATTCG
GGGGGAAGTGACTGATTTTTTGTGAATCCTCAGAATTTAATATTTCCACC
GGATCACTGAGATAGAAGTGTTTATTATTCCATATAGCACACAAAATCTA
TTTaatattacacccctgtctcacagccccggtgaaacttttccccacag
cggggacaaaaatttctattgaaatctcaatggggatagaaattctattg
ttccaagattaaaaaatccagtggggatggttttggagtgcaatttttaa
gcattgaatttcgaatggggtgaaatcaaagtcaactCCCTAGACTTGTG
AACACGTCTGTTATTACTTTTCGCGCGAGATTTAGAGTTGGGATACTAGT
TAGGTAAAATCttgcctgtaccagacgaccacggctttttcctgGAATTC
TTCGTCCAACTccatgtatggatataaaaagGAATAACCTGATATTCCAT
ATCAATAATAAACCCTCAACAGAGAGGACTCGAACAAGTTGACGCATATA
CATCTATATAGATCTAAAATTGAGACGGTTGGATAACAAATCTTTCCAGA
CATTAAAATAAACGATATGAAGAATATAATATTaccagtttttttcattt
tgtagaTTTTGGACCCATTTTTGTGGAGATACAAGATCCGAAAGTGATAT
TACCTCGATCACCCAAACTAAGAGAGACGTCAACTTCACTTCAAATTCTA
TACTAAACGAGACAACAAATCACAAATGTTTAACCGTGGTCAGACAAATC
ATGGTACCTACTATGAcaatttcatcaattttattgGGAATCTGGGTTCG
ATATGGTCTGAAACATTACGCGAAAGATGCATTGTTATAAACTCATTCAG
TCCAAGCGCTGTCATTGAAGACATCAACTGTCATCTAACCTGGGTTTTAT
GAActattgatttttatgtttctgGTCTCTTGCACTTTTGCACAAAACTT
TGCTGATTTCTCCTgacaacaacaaaatttttaattttttttttgcaaaa
tgatcctttttatGATGTGCAAATTAGACCAATTTTTTCTACCATCAGCC
AAActgaagttatttaaaaaacaagttttgctggtAATCCTCTCTTGATA
TGATAATGTAGTACATTGATTGAATCACGTTTAGCTTAATTTAGTACCGA
TACCCGCTCGAAATCTCAAAAGGAAGGTATCATGATGAAAATCTTTCTAT
TGATATGACAACGTAGGTATTACAATTAACATTGCAGCCAAGTTCATCTT
TTTCCTCCGTCACAGGAACGAAGTTTAGCCCCCAAAACCTCGTTTATTTT
AGTTCGCCTGCTGCTCGGAATCTCAAAAGGATGGTTTTATTCGATGTTAT
TGTTGATGATACATGTCGACCCATTTATTGTCATATTCTGCTGCTTTCTA
TTCGTTCATTTCAACTTGTGTATTTTTCGACCGTTCGAAATGGTATTACT
ATCGATGTGGCTCTTTTTTATCAAGGTTTTCATGTCCCGTGCTCACGCTG
GTGTGAAGTAACGTGGACCCCACTGTAGGCTTACTGAGCAACAAGGGACA
CGAGGGAGAAgagttttgtttgaaaatgaagatattaTCGCTTTCGTTCT
TCTCTTTTCGAGGTTGGATGATGAATAAGAGTAAGGAGAAGTTGAAGACA
AAGACCATTTTGATCACTTTGTCATCCCCGATCAAGAACGATCCCATTCC
AAATGGTTGAAATTCTTCTTCATCGTCATCCTCCTCGTCATCATCCAAGT
CGCCGACATCTTCACCGTCATCGGAATCGACGTCGAATTCCTCATATTCG
TCGTCATCGACTTCATATTCGTCGTCATCGACTTCATATTCGTGGTCATC
GACTTCAGATTCCTCATAATCATAGTCAATAGAGTCAGTATCGAGTTCAA
AACCGTGCACTAAACGGTATAATTCTTCGCACCACATATTTTCGTCAGGG
TCTTCTTCTACGATTGTTGATCGATATTGATATTCAAAGACATTTTTCGA
ATACCATTCTTCTTCAGATGTTTGGAAGAATTGGTTAAGTTTATAATCTT
CCTCGTTCATACGTTCATTTTCGTCACGTGTTCGACGTCGGCGGGAGATT
CTACTAATCTTATCTTTCATTTCCCTGAGTTTTTGAATTAGTACCTGGTA
TCCTTCAATCCTGTATTTTTCCTCGAATTTGCGATGATCAGCGATTTCCA
ATTGGTCGTTAACGTGATGAGCGTCGTGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067205TCONS_00067205Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_466supercontigscaffold_466:435691..439369 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.02	3.92	3.56	4.47	1.29	0.79	0.28	0.29	0.3	0.11	0.1	0.08	3.07	3.33	0.64	0.95	2.93	3.91	9.89	11.05	6.01	5.77	5.23	7.27	7.6	8.03	0.44	0.32	0.52	0.86