XLOC_041952 (gene) - C. hemisphaerica

Overview


Name	XLOC_041952
Unique Name	XLOC_041952
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_464:222412..230359+

gene from alignment at scaffold_464:222412..230359+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_041952 ID=XLOC_041952|Name=XLOC_041952|organism=Clytia hemisphaerica|type=gene|length=7948bp|location=Sequence derived from alignment at scaffold_464:222412..230359+ (Clytia hemisphaerica)
TtcaggaaagaaaaaaaacaacgatgGATCAACaatctttatataaaaaa
atactgTCACTGCAGCCAAGTCTAATTGATCCTACAAAATGTCATCCAGG
AAAATCGTTATATGCACAAATAAAACGAAATAGTGAAACGACATTGCAGC
GtcaaaaaagacaatttaattTGGGGAATTCGGAAACATTCTCTGATCCT
ATCATAGCAGCCGACTATCTTCTTGAAAGGGAATACGGCGAAACAGCACT
TTTTGACACTACTCAACATGGAGCTGTCTTTATACCTCCAACGTTTGTTT
CAAAGCAGTATATAAAGAAATCGACTGTTGCGGTTCTTAATTATGATGTA
AAAAAAGACATGGAAAGACTTTTGAATAATTTGTTGCACCATTCACCGAA
TTATTGGCTCACTAATGATCTGCAAGATTTTATAAGCTCACAAGGCTTTG
GTGATACGATTAATCAAAAGTATTTCAGTAAATGGATCCTGAATCTTAAA
ATTAAGTATCTAATTATGCAAGAACTCAATACAGATGAAGTTTGCTTACC
ACCAACAACTCTTGAGCCTGACGTATTTATAAAAGGTTGCATCCAAGAAT
TTTGCTCAGAATCAACTAAAACATCAATGATAATCCTGTTGAGTGAATAT
TCAAAGATCCCATTAAAAAAACTATTAAGGCAGAAAGTTCACGAAAACCC
TCCAACTGATTCCAATCTTCGATGGCTGTTTGACTTAGAGATATCAGAGC
TAGGAGAGAAAAATCTACATGAATTCTATGATATACTTTCATCATTACAG
GATGATGATGTTCTCAGTGAAACAGTTGTTCTTTCTTCAATCGATTTTAT
GAGAAACGTTCGAAATAAGATGCATCAGGAAATGGATTTTATCATTATAT
CATGGCCACGAAAGCTAATTATCTGCATAGAATCGAAACGTACTATTATT
ACTGACAGGACTTTCGACTTGTTGAGTAATCATTATCTTTTGTTGGAAGA
AAGATTTAGCGACCAACTTGGACATGGATGGACCTTTTTCCCAGTTGTTT
TGActgaaattgataaattttcattttccagtcGTCACTACATCACAACC
TGCACAGACATCAAATCATGGTTGGTGAGTATTTTTCAACGATATCCTGT
AGTTCAAATGTGGATTCCGTTCAAAAATACACTTAACCAAACTAAAGATG
TATTAAGATTGATGATTTTTGCATTACATGCCTCAAAAACAGGCCAAATC
GCACCAATAACCACCACAAATTGGGTCGAATGCATCAATTCAGCCATCGA
TAATGTAGCTACCAGTCACAATATCCTGTTTTATTCCAAGGAGCAATTAG
CGGTGATGGCCACAGATAATGATCAATTCAATAAATTAATTATCATGGCT
GGTTGGGGTGCTGGAAAAAGTCTTTTGCTCACCAGCAAGGCTATTCAATT
GAATTCGGATCCTTATTACAAAGGGAGAGTTATGTATGTGCTCGCAAACG
GACCTTTCAAGGGAATAAATACAATGCTCTATCATCGGTGGAAACTTGAT
TTGGAGGAGAATTATGGAATCTTTGTCAAAGAAATTGCTAAAAAAGTAAG
TCAAATATTTGTTTCgtatatacagggtgtccggaaaaaaagtatcgagt
cgtacacttctatagaaagaaagttcttgtatGTGTTTCACTAAAATTGT
GATGTTTAccaaagtttctctctgtgtcatattaattgtcatgagacatc
ttttatgaataacttttacaaaaaataattctCGATAACTTTAATGTcat
aaaaattgtaaagaattaatttttttttatcataatgactgttgtaaaaa
caattattttgtgggtatatattttcttacattttgttaaacacacgcaa
caaccttctactcagaatcatgttcgaataTCTGATACtattttttccgg
acaccctgtataagaaAGGTCCATGGTTGACCTTAGAGATCTCCTCAGAG
AAGATTCGCGATAAAAATTATCtacacgtttttgttttttttaacccTTA
GGGGGCGAAAGATacataccgggtgacccacgaaaaagttcggacgtttc
tcggcgtcttgaggccgaacaaatgtcccaaagtgcttggagttttatta
tttagaaagtaNNactcgttaaataagtcaatttataagagattttctaa
ttgattgcattaatttaatacctctttttacgtgttttttacactttccg
aaaagtgaattttgagtttaaaaggtcataagtagagaactagttggtca
aatttaaaaagtgatNtcaaattttaagttaggatatctactttttaaat
accaaaattccgagcactttgggacatttgttcggcctcaagacgccgag
taaggtccgaactttttcgtgggtcacccggtacgttttgaaaaggtcat
tttaccgatacacagtcttttggtcataactcctgaccacttgagattca
gagaaaaaaaaatctgctattttttgtagctgagagaaagagctttcgaA
CGATACCAAAattgatacctgaatcgtttgtcctggtcgagaaattgcct
ttgaaagaataaatttccagaaaaaaatgatgagttttttggcctttttc
aaaaaagttagcggctttgaaaggttaagaaaatagttttaccaagcagc
ctcaatgtttcttaagaaatcggccttttgagccttaaatgtttcttaca
tgtttctcaattttttgacataatcagcctcatggaaggctggattggaa
ggttcttaaaaaaaactgaattaaagtctattcacgataagtgtgcactc
ttttttcatttacctataacttttgaaggaattcttcaatctttataaat
ttggtatcattggaaagatattactgagtggaacaatttgaaataaaata
ttttttgaaaaaattctaaaaacgaagatgaaaatgaagaagaaaaaatg
aagatcttgtagcgaagagctataactttcattttcactggagtgaatcc
ttgattatcgaacgtcatcactgtgaaataatttctcaaaaataatcatt
cagtcaaaagatatcaaacaaatttataagctggttgacgtctaaaaacg
ctgttttctgctgttttctgctgttttttggggtcaatcacttgttaact
ttgtatcataactttatattgaataaatattttagtgaaatttctttacA
GTGACGACCTcctaaaatcaaagaatctctccagtgaaaatgaaagttat
agcacttctctaaaagatcttcatttttttcttcttcattttcattttcg
tttttagaatctttttaaaaacttttttatttcaaattgttccactcaca
aatatctctccaacgataccaaatttataaagattgaagaattccttcaa
aagttataggtaaaagaaaaaagagtgcacaattatcgtgaatagacttt
ttaaaaaatgttattttctcattctcagcctcagcatgtttcttagatat
gtcttagtttttaggcattctgaacctcgtttttcttaaaagtttgtttc
ttaaaaaaatcgtGTATGCTACCCTGTTAgtatcaaaagtatcaaaaata
gCATCATGTTAGCAGTATAGTGCCAGGGGCTATTTCCCTCTCGCAAAATA
GGAAGGGTCGCAACTTTattctttaaaaattcaaaataacatttCTCTAA
TTAGTAGGGGGGGGCTAACTCTCAAGATCCGTGGTTATTTGATTAGATGA
TTAGTCCATTCCATtcttttttagtgtttttccTATTCTACAACATCTCG
TTTCCAATAAGAACTTAAAGTCCTTTCATGGAAAAGAAGCCCTTCAAAAT
ATCTTTAGCAAAATGTTTAATATATGTGCGGGTTCGCGCTAAAGCCAATC
GAGCCTATAccttgggacaagctggagtttttacaagctctcgtttgatt
tggttggtcgttaacctgtaataaaacaattttgttactttttctaaaga
acgcgtcatctctattacttcaaataaccaattagtgaagtctcttgtaa
aaactccagcccatCTCTATACCTTACCTATAACTTTCACAAATcgatgt
tttcaaaatatttcgcaAGAAATACTTTCGCAATTTGTCaacttttattt
gtttttattccaaatttttcactacagtatatggcccccaaaacggagac
ggcccccaaaacggaggttttcattaaaatgaagattctgacttgtagat
ttatcagaattaaacgatttttgNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggttttcatg
cagcaaaaatttttgtaaaatctcttttcctctagatttgagagaaattt
caaatttgatcgccgttttgggggccacatactgtaagacgaaaataaaa
caatgtagtgtttccggaatgcgggtgaaggaaaaaagctttcatgcggc
cggccggaaaatatatttttttgctttttttgataacttaagatcattga
aatagaactttaaagataacttttatgtagaaacagtatgaagtaagccc
cgaatactaatgtatcaactactaacgaacaaaactgGATTTACATGCGg
gatatctaaccaaacgacctttgatagcttgaacggttgacttgattttc
tttatgatgaaccatataaatgaacccatagtctgctgccgggtcagaaa
aatattatttttcaccTATCGTCTACCATTTACCTCAAACCCGGGGTAAC
TAGGTTTGCGATATGATTGGTCTGTCCCAgccaaaaatctaaatcaaaTG
TTTTATCCTATTCGTTAAAATCATTCCCTTGCAAATTCAATTTAAGAGCG
TCAGCTGCGTATAACGTTTATTCCAAATACTAACGAATTTCAATGATTGT
TATTATAGGGTGGAAGCCGTACAGATTTATTGCACACTATcagacatttt
aatgtaaaagCGATATTTTTAGATGAGTTCGACTTAAGAATGGGAGACGA
AACAGTCGATAAAATATCGGAACTTTGTGAAATGATATGGATAGTCCCAT
CAACGGAATCTATGTATTTTAATGACAATTTCAATGGCTTTAAGGAGCAA
TTTACAACTTTAAACCTTTCGCACAATTTTAGAAATTGTCGAAGTATCGT
GGAATCGACAAAGATGGTTGCAGATGAAACAGACTACCTTTATAAAGAAG
GTATAGTGACGCCTCTACCCAATTTCCCCTCTGGTCGAGCACCGTTGTTT
GTTAGGACACTGCGAGACGCAGTATGTGAGTCACGGAAGATAACCGATGA
AGGGATCTTGGTAATAAAAAACGATTTCAATGGGAATGATATGGTAATGC
TGGATGAGATGAAAGAAAAATGGAGGATTTACAGTTTTGATCGAAATGAT
TTTCGGCATAACGAAAACCCATACACATATCTCCAGGATGGACATATGTT
AATAATTAATGGTTTTCTGGCTATAGGCTTTGAGTGGCCAGTGGTGATCG
TGTTTGGAGATATGAGTAATGATGTAACTTATCATGAATGCAATTATATG
ATGAGGTGTTCCACTAGCCTTATTATTGTAAGATGTCAGTAAGCTGTCCC
AGTGTCGTCCATGACAAATGTGAATTATAAATTTAAAACATGTAcgcgct
tttttttataagaatagtgtactttggatgagggtcaagttttcttaaga
aattgccaaaattgaggatgaaatattcttaacgtatttttactttttca
gacttgacttttttacaaacatgagaaatgattaatttgagagttttgga
cttttgagtgaacatttgggttaaaattacatttcttcctcaaagcttca
atttatctctaacaaagtaagcagttttttctgttaaccaaatacaaaat
aactGTATACTTGTCAAGTTCTgtgagggtattcttagggtattcttacg
atttggccaattttcaccctgatattcttatagaagatattcttataaaa
aaaacgtgttatCCGAGAGAATTaggttttttgactttaaaaaagcaACG
TGGCTGAAATCTggaattaacatctttttaagcTTACGGTCTGAGAATTA
AATTTCCGTCCAAACAGTATATAATACTTTGAGGTTTGTGACCGAcaaaa
aattaccaaattttgatgacgtcatttgttaACTTCCATAAACTTTATTG
ctttcatttttcagaaaaatttattcaGAGTTAAATTTCCGTTCCAATAC
TTGATAGTTTGgatacttttaaaaaattttcatgacgtcagcAATCAGGT
GGTTTTTAGGCGTGTCCCCGTCAATTCTTTTTCAGAATATCATCAGGGAT
GTCTGTACTAAGTTTCATACTTTTTTAACCCTATGCAGTATTGTTATGCT
TAGCTACCTGGCTAAGAGGTACCTTTTGGGTTCTAGAACCAGAAATTACC
CGTTAAAAGTTGTTtaactatatttttttttttatgatgacgtcattttt
agtactaaaagaatatttaagtAAATATATTATACCTATTTTGTGTAAGC
AATTTAATCAGTATTGTATAAATAATAGTATTTGGggctccaaaaaaa

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00067148	TCONS_00067148	Clytia hemisphaerica	transcript
TCONS_00067149	TCONS_00067149	Clytia hemisphaerica	transcript
TCONS_00067150	TCONS_00067150	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00067148-protein	TCONS_00067148-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_464	supercontig	scaffold_464:222412..230359 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.39	0.29	0.32	0.42	0.21	0.28	1.12	1.32	1.15	1.59	2.52	1.66	3.29	4.01	1.41	2.44	0.92	1.4	0.67	0.65	1.02	0.94	1.16	1.04	5.62	5.77	0.23	0.23	0.52	0.81

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XLOC_041952 (gene) - C. hemisphaerica