XLOC_041946 (gene) - C. hemisphaerica

Overview
NameXLOC_041946
Unique NameXLOC_041946
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_464:61134..65653+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041946 ID=XLOC_041946|Name=XLOC_041946|organism=Clytia hemisphaerica|type=gene|length=4520bp|location=Sequence derived from alignment at scaffold_464:61134..65653+ (Clytia hemisphaerica)
TGGGTCATAAAAAAGGCTATTTAGAATAAAAATAGAGCTCAATACTGTTT
GAAACCGTTTTCTCGATGTCTTTAAATGCATCAGTCTAACTCGTGTTAAG
GAGGGTTATCTATTACTAGACTTTTAAGAAATATAATTCTTGACAGTTTC
TGGTTAATTATTGGTGCTAGTTTTTGCTATAATCGATTGGTTGTTATTAT
AGATAATACAACTAAACCAAATTCGATTGTCCTTGATTTGCAGTACCAGA
CAGAACCAACACAAGATATTGCAATGTTTATGAAATCGtctattttgttg
gttttcacGATTTCTTTCTTCGTGCTACCATGGTTTGAAGTGGAGAGTTT
TCCAACACACTCTGAAAATGACGTGGCTCAAAACGGTAAGTCATTTTGTT
CGATTCTGTGATGGAACTTACCACATTcacacacaacgttgttccaacgt
tcatctaacgttaaatggacctTGTTAATATTAAATtgacgttgaaagaa
cgttgtgtgccagctgggtttagACAGTTAACTTTTTGCTCTTTTAGGTT
TGACTAAATCTTCTGTCATTGAAGAAAGAATTCTAACTTGAGTCTTCCCC
ATCCCGGTGTTTTCTTCTAGCGAAAGTTTTCCTCCTGTGTTTAGATAGTG
TAAAAAACTTGTGTATAAACTTAATTAGTCAATCACATATTTGAGATGGT
TCAATCAATTATAAACAACTTTTTACAGCTCTTTGGTGCACTCACCACCT
GTGTGGCTGAAGTTCATCCATTTTTGGAAGTCTAAAAATCGCAAGTCTAC
AGTCTACAGACCTTTTGTCCATGTTTGTATTTCCAAAGTCTATCAAACTG
TTTCTCATATGCAGAATTAATTAGGCCAAATGTTGCTTTGCCTGGCCTCC
AGGTTGAATTGAAATCTCGTGTCGGATGGACATCAAAAATGCTACGAATT
TCCTAACGGAATAATAATTCCTTTAATACTACTAGATTGCGAGTTAAAGG
ATTGTTCAATGGAGTACTGGGAACCATGGTGTGGAACGGATGGCAAATCT
TACGGCAGCCGATGCAGTATTGAGAACGCAATATGTGACGAAAATGTGGA
TGTCAAGATTAAACATAAAGGACCTTGCCGACGTATGTGAAACTCAGATG
ATTTAGTAGCTGCGTTCTATTTTTTtaaacccctgtctcagtgaccctgt
TAGAGTATTACATATAGTCATTGGAGATGAAATGAAGGAACTAAATTCCA
AAGAATGGAAAAATGTCCTGCGCTTAGTTTGTAAGGATTTTCAGAAATCC
AGTGAGAATTTTAAAAGCTTCAGTGTCATTCCCAGGTTGACCAATACACC
CCTTTGtcacactccaaaaccatcctcactggattttttcagcttggaac
aatataatctctatgaggccccccagtggtttgcgtgatggcgtgattgg
gacttttttggcgtgatggcttgattggagatttttttggcgtgatggcg
tgatcaagattttggcgtgatgcgtgatagggcaaaaatttgaggcgtga
tacgtgatttgggctatttttcgctatttcttgcgtgatgacaaatttta
gcgattttcgtgatgcgtgatgaagaaatttttttcccgtgatggcgtga
ttaggggtgccacTGGGGGGGGCCTCCTCTATCCCCATTCGGattaaaat
ggaaaattttatcCCCGCCGTGGTAAAAAGTTTTACCGGGGCTGTGAGTG
TGAGACAGATGTTTGCCAATGAGTGTGTATTTTCTCACTGTCACAACTCT
TTAGCTGATTTTTCCAGTAGGTAGCGGTCCCATTAGGCCTGTGACACGgg
ggaattttttcaagtacacgcttctttttttataagaatacactttataa
gaatgttcatgatgaaaatggccagaAAACTAAGAATACGCTAAGAATat
taccatcatggaatttggcaactgaagctaagaatgcAATTTTAAGAGcg
ttttcaattataaattataaattatcctCAAGTAcggccattttatgctt
gagacgtatgtactaaatgttaaatctagtatgaattaggatcctaacct
aaaaaTGTACCGTAAGAATATATATTagaatgattttcccaaaaaagtta
agaatatcaatgatgaaatggatttacaccattcttataaaaaaaaagcg
tgtatatttTCTTGGGCATGAATAAAGTCGAAAGtgtcttttcaattttt
ttctagattGCTTCGTATATTGCGGATGATCCATCAAAACACTTAAGGAA
TTGAGATGGCACTCGATGAAAGacaaaaaatacttttatattttattaat
gTCATTTATTACATTgcagtaattttttttcaattgtcAGCTTATGTGGC
AGCTTAGAAGTTGTCTCAGCTAAAATTGTCCATATCAATGATAAGATata
cgaaaaatattttcaactctttAATTCGGGGTCAAATCATTAATAATTCT
CATCCGATCGCTTTCTAAAACTTTATTGCTTTCATGGTAGCAAGCGTCtg
cttataaaaagttattataaaaagttaaaaaagggtGGCTGTGGGAGAGT
GGTTTGTAAAGCCAGACTAGTCgtgtatacaccttttcgaccgtagccgc
cgattgccgcgcgggcatttctttgtccgctttatcctaCTAAAACCGCC
CCAGtcctttttttcgcacctatagacaatagaaaaatgtgtcaaaaaag
gattggatcgagtttagggatCCCCTAATTAAAtgattaagtggcacgcg
cctgaccgcgcgactacggtcgaaaaggcgtATTCAGCGAGGTGTATTCA
GTAGTGGAATGCAGTGAAATACAACGACGAGATTTTTCCGCGAGACATAT
CttggaatattttttcaaagaaagaaaaaaaaaccattCAATTTATAAAA
GATAAGTTCTTTTGGATTGATCATATCTCATTTATGGTtgatattgtaaa
aaatgtatttCATTGAGAAATTTATTAATATAATAGTCACAGGTTTAAGC
ACAGTCAGAGACTGTTAAAAGTAATGATATCTCTTTTACTTATTTTCCTC
AGGATAAGCACGTCCACCAAAGTATATTATTGATTTCCATACACCATGTG
ATAGCCTCATTTTCTCTCGTAACATCTTCTACACTTGACATCCTTACTTA
ACATGATGCCCACTCGTTTCACTGCCCACTATTCAACAGGAATAATTTCC
TATCGTCATAAATTTTCTCATGTAACAGATCACCATTTTCTTCTTGTGAA
GTTCTTTCCATTGAAGTAAATCAGTCACAATTCTTCTTCAGGAAACTCTA
CAAAACCGACCTATTGAAGATTTGGTTATTGCTCAAACAGATGTCAATTC
TTTACGTTTCTCCCATGATTTCATCATAAATCTTCAAATTCATCTAAAGT
TTAAGACTTTAATTTAATCTACAGTTGACGCcctctaattcgacattcta
ccATTAGATAccctccattattcgataatattgaaagttgCCGTCAACAA
AAAAAACTCTCACAAACGACGCTCTaccattcgatacgctcccttattca
atgaaaatccaatAAGCTTTGAAAATCcaataagagagcgtcaactgatT
GAACTTTTATAAACCACATCCCGAGTCATCCATTTTACTGGATTGATGTT
ACCACCAGTGTTGGCAACGATGAAGTTCTTCTGATATTGTATCGACTACA
GCTCCGGTACTTCATAAACATTTCCTCGTCTCTACCCACCAAATTACTGA
CACTAGCAGCTGTGGCGGTTGTTTGGTAATACCCTGTTAAAGGATCTATT
GTTTGTGTGCGTTTTCGAGATGTTTTAGGTGAATTTTTAGCTGACTTTGA
TTGTGGTGGAGTGTGCGGTTTATGGTGGTGATAGTGTGGGCTATCATATC
CAGTTATGGTGTGCGAACGGCGATCCGAACAGGGAGACCGATGCTTCGGG
CTATCGTAGCCAGTTACAGTGTGTGAGCGGCGCTCTGAGCGTGGTGACTT
CCCAGATATGCACTCACTAGATCCTGTATATCCCTTACGTTCTGATCTTG
GTGATCTACCGCTTGTGGAGCCACAGTGGTTTATATTGGGTGATGAGCCG
CCATGTTTTAATCTTTTCTGTACATCGAGTTGCTTCTTTGCTTTACCGTA
TGCATTTGTTAACGCTAATAACGATGCCATCTTCACTAATCTGGTAATTT
CTCTTCGGCGGCTTTTCTTCTTGATGGCGTCACGGACCCGTGAAATAATT
TCTCAAATCTATAGTCtctaaaagtaaaaattaaGAACGTTTAAATGTAA
ATCTTAAACCCAGTTTCCGAGAAGGAGATATTGTGTGTATAGCCCAACCA
CTCTATAAGCCCAAATGAAAGAGAGACTATACAGATCAATGACTTCGTTA
CAATCTTGCACTGCACCCAactcaaaacaaacaaatttccTAGTGATCAA
ATTTTCTCCTGTTGTACCAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067134TCONS_00067134Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_464supercontigscaffold_464:61134..65653 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.35	0.58	0.36	0.48	0.56	0.42	2.93	4.47	4.3	4.56	3.98	3.02	7.46	7.15	2.6	4.29	17.03	23.28	12.03	16.17	21.39	18.94	23.1	24.63	19.96	18.24	6.6	3.5	0.39	0.24