XLOC_041450 (gene) - C. hemisphaerica

Overview
NameXLOC_041450
Unique NameXLOC_041450
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_451:723740..733105-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041450 ID=XLOC_041450|Name=XLOC_041450|organism=Clytia hemisphaerica|type=gene|length=9366bp|location=Sequence derived from alignment at scaffold_451:723740..733105- (Clytia hemisphaerica)
AGTCACGGAAAGCTGACGAAATCAACAATCTCGTTTCTCTATCTTTGAAG
TCTCTGAATAACACTCGCTCGGAAAAAGTAATTATCTTCCTTAGATTTCT
GTATGTGCAAAGTATTACGGAGATAAAACAGTTTTAAAGGAAAAAGTACA
ATATACTCCATAGTTTTTCGACGCGACTGTTACAACAGCATGAAAACAGT
GTCCCCATGTGAATTTGTTCCTTTTCAAAAGAAGATCAAGAATTAAAGAC
AAGACTAGGGAACCAATTAGCACTTAAAAGTAATTATTTTTTAATTATAT
TTGTATAACTTTAGAAATACAGCTTAAATTTGGGAATACATGTAGCTTTT
CATGTGTTTATTAATTTGGATTGCAGTGAATACAAAATCAAAACTTTAGC
TCAAATATTTTGGGTATTCACTAAAGTTAAAGAGTATGGAACACAAAACC
TAGCATGAAAGCTGAAAAAGAGTATGAAAACTCAAAACTAGCATGAAAGC
TAATATGAAAGCTCGAAAACGTAGCATGAAAGCTAAAGAGACTATGAAAG
CTCGAAAACTTAGCATGAAAGCTAAAGAGAGTATGGCCACTCAATCATCT
AATGTGAACAGTTCAATTGAAAACCACCTGAAAAAGCAAAGTATTCCCAG
ATTTACAAATGTTGTAATTCGTGAGTTACATCTTCCTAATTCGGTACGTT
CTACCCCAGGGACATACAGTTGTGCGATTGATTCGTTCATTGATCTTTTT
TACCATAGTATATTTGGTCTCTTAGACAGAACTTACGTTAACAGTCCACT
TTTGATCTCTCTTCTTGATGTGTGTGACAAATATACAGAATTAAAAACTC
TTCACAAAGATCGCATCTATAAAGAATCAGAACTTAAGTATCTAGTGTCT
AATGAAGTTCGCAATCCAATTTGGAGCCACATTATTGATCACTGTCCTAG
TTTCAGAGCAAGAGATTGTCATGCCGAGTTTTCACAAATTTTTCAAGAAT
CTGTCTTTGATTTTAGAAATGACTTAGAGAGGATAATGTTTTGTAGCACT
TATAACTTCAATCAAATTTGCATAAATTGTGGCCAACATTGTGTAGACTC
GGTCTCAACATTTTTGCAATATTTTTCTTGGAATGAAACTATAAATGATG
CAGTGATCAATGAATGGCCAGACTTATTATTTTCATCGAATTTGTTAGTT
CAAGAAATTGTGTGAAAGAATGAAAGAATTCAGTTTCCCTTGCGATTGGC
ATGGTCAATAACTATACACAAGTCGCAAGGCCTTACTCTAGAACAAATGT
CAATTGATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNATTAGTCAAGAGTCCACTGAGGATAGCTCTTCTGAATCA
GAAAGTGAGCATAGTGAAGATGAAATTACAACAGACCTTGGTCCTGAAAA
TGAAGAAGACATAAGGCCTGATGAAATGAGTTCATTTGTACCTTCTTCTT
TGAACACACAAATGCATAAAAACAAAATTTCTCATTTTATCAACAATATC
CCTGAACTGGATATTATTGGTATTGAACCAATCAATGAATTCAATACTCC
ATTTTTAGCTACTATGGCTTTTCCAACTCTATTTCCTGATGGCAAAGGTG
ATCCAACTAACCTTGCCTTGGAAAGAACTATAGCGTCTAATGAACTTGAA
AACTTTTCATTAAAGATTCGTCATTTACTCAAATTCTGTGATGTCAATGA
TGACAATTACTTCTATCGTTTTGCTGCACATCCTAGATTTGCCTACTGGG
CTTTCAACATATTGTATCGTAGAAGAATTTTGAGCAGGGGAAATTTGTAC
ATTAAAAGGAATCCAGGGGAAATGAATTTTACTTTGGATGAATTCAATGA
AATGTTAAACTCTAACTGTGCTAATGAATTGATGAAAAAGGTATTTTATT
ACACCAAAGATGTAAGTGGATCACGTTCTTTTTGGAACAAAGTACGAAAC
AATCTGACAGCAACAGTTAAACAAGTTGGGGTATTTACAATTTTTTTCAC
ATTTTCTATGGCAGAGTTTCACTGGCCAGATCTTTTGAGTAAATTTAAAG
TAGATGTCAATGATGTGAATGGAATAAGAAAATTTATTACAGAGAATCCT
CATGTAGTAGACTATTACTTCACTGAGCGTACAAACAAATTTGTCAAGCA
TTGGCTTTATAATTTGCTAAAAGCTACATGGCACTGGTACAGGTTTGAAT
ATGCTTCTAGAGGTTCCATTCATTGTCATGGTGTTGCTAAACTAGAAGAC
GATCCAGGTTTGGTTGAATTAACAAATATTGCTCTGAAAGGTTACCTTGC
ATCGCAAAAATTAAAATCTGAGAATGTTGCTTTTCAGGAAAAAGAGTTGA
ATGAAATTATTGCTGAAGGTAGCCAGGCTGAGAAACAAGTGTGTGATTAT
GTTGATAAGCTTCTTTGTACTTGCAATCCTATGGAGGGAGAAAACTGGGT
CAAACCCCAGGTACATCCCTGTAAAGTGGATTATAGAAACTTAAATCCAG
AGGAAATGAGTACAGATTATGCCAATCTTGTTAACTCTGTCGAAAAACAT
CTTTGTAGTTCGGCATATTGTCTTCGGCAAAAAAATGATGACACAACATG
TCGATTTCACTTTCCTTTTGAAGTAAACGAGAAAACACATTTGGAATTTG
AAAAGGTGAAATCTAGAGATGGTGTTGAAAGGTTCAGAGCAAAAGTTGTA
ACTTCAAGAAATGACCCAAGAGTCAACAGGCACCAACGTGTTTTATTACA
AGGATGGAGAGCCAATGTTGATATCAGTGTAGTAGTTGATTACCACTCAT
GTGTTGAATATTTGACAAAGTATGCTTCTAAGCCAGAGAAGCTCAGTGAT
ATTACACAGGATGCGTTCACTCATGTGGCTTCAAAAGTAAACTCTGATAA
TTTTTCCCCAAGCTCTGCAATAAAGAAATTAATGATGAGATCGGTAGGTT
TACGTGATATGAGTGTTCAAGAGGTTTGCCATCAAATATTAGGATTGAAG
TATTACAGTAGTTCTTATGAAGTTTATTGCATGTCCTTAGATGGTTCTCG
ACAGGTTGAATTGGTTGATGGTGAAGTTAGTACAAAAAAATCTCACTTGG
ATATTTATGCATTTAGAGAGGACTACTCTTCTGATCCAAGGATTTCTGAG
ATGAATTTTATCCAATTTCATGCCAATTATGTTTTGGTCAATGAAGAGTT
GCATAAAAGGAAAAAAGAAGTTGTAATCCGAACATTTCCTTCTTACTCAT
CTTCTCCAAATAGTATTCACTATAGTAAGTACTGCAAGTATAGTTTACTA
AAATATAAAGTATGGAGACATACTCCAAATTCAGCTTGGGGTGAAATAGA
TGCAACTGATGAAGGTTTTATTATGTGTTGGGCTACATTTCTACGATCAG
ATGCTGCTGTTAGTGTTCCTAATCATTTAAGGGAATTAGAAACAATTGAA
AATGCTATGATGAGTAGAGAAACAGGTACCGATTCTCAGGACTCTGATTC
CGAAGATGATTCTGAAGTAATCAATGATGAGATAAGCAACTACAGAGAGG
AATGGATGTTTCTAGCAGATCATTTCTCAAATCCCCAACAAGAAGATAAT
TCGAGTGGTAGTGAAAATAGAACATATTGGCTGGATCAGTGTTCCCAGTA
TAATTCAATATCTAGATTAGAAATGCCTGCTTGGATAAATAGCAAAAAAG
CTACCTTAAGAATAGAAGGTCAACTGAATGACGAGGACACTGAATTACAG
AATGTCTTAAAACTAAATGATCAACAGCGTAAAGCATTTGAGATGGTAAG
GTGTCACATTAATAGTAACTCACAACTGTTGATGATAATTTTTGGAAAGG
CAGGTTGTGGAAAAAGTTTTTTGATTCACAGACTTAGACATTTATTAGGA
GATGCACTCATCATTTCATCATTATTTGGACTTGCAGCTTATAGTGTAGG
AGGTAAAACTTTACATCACTTGTTGAGATTGCCTATCAAAGGCAAGTTTA
ACTCCGAACTTGAGGGCTCGTCATTGATACAACTTCAAGAAAGGCTAAAA
GGTATTAGGTACATTATAATTGATGAATATTCTGTAATTAATCGAACAGA
CTTAGCTTGGGTGAATCGGAGATGCAAACAAGCCACTGGAAAGTTTGATG
TGCCATTTGGAGGTATAAATATGATCTTGTCTGGAGACTTGGGACAACTT
CCTCCTGTGAAAGGACATCCTATTTATTACAACAATCCTAGAAATGAACT
TGAAGCTGAGGGATTTTTCGTTTATCAATTATTCAATACAGTTATTGAGC
TTACTGTGAATCAGCGCTCAGATGGAAGCAGTTCTCTTCAAAAAAGATTT
CGCAGCCTCTTGAGTAATGTTCGTGATGGTAATGTGAGCATAGATGATTG
GAAATTGTTACTGACACGTTCTGGACCTAGTATTAAAACTAACTTTTCAA
ATGCCTTGAAGTTGTCCTATGGAAATAAAGATGTTGCAGAAAACAATTTC
AAGGCCCTTGAAAAACTGAACCAACCGATAGCTAGAATTTCTGCTTTACA
CAATGACAAAAAAGCTGCAAAATGCTCTTTAGATGATATGGGTGGCTTGG
CACCTACTCTCCTTTTATCAGTTGGAGCTAGAGTAATGTTAATGAGAAAT
TTGTGGACTGAATCTGGTCTCTGTAATGGAGCCATGGGTACTGTTTGCAG
CATTGTTTTTAAGGATAATGAAACTCCACCATCTTTTCCAATAGCAGTGA
TTGTACAATTTGACCAATATTCAGGTCCAAGTTTTTCAGAATTACAACAG
AATTTGGTACCCATACCACCTATTGCAAATACATCTGACAGCCTAGGTAG
TAATTATGAAAGAATTCAGTTTCCCTTGCGATTGGCATGGTCAATAACTA
TACACAAGTCGCAAGGCCTTACTCTAGAACAAATGTCAATTGATCTTGGA
AAATCTGAACGAGCATCTGGACAATCTTATGTTGCTCTCTCAAGAGCAAA
GACTTTAGATAGTATTTATATTGAGCCAATGCCATATGAAAGATTGAAAT
CCTTAGCAAAAAGTAAAAGTTTGAAAAAGCGTTTGGATGAAGAAAGCAGA
TTACGTCAACTTGGTATGACAAAGTAATCAAATTAAAGTTTTTATTTACC
AGCCGTCTCCTCTAAATAGTTTGTATATAGATTTGCAGTTTTTGTGATTC
TTTCATTGTTTTTAAAAAAAGTAAAGGGGAAATGTGGATATTTTCCTGAA
AATTTGTTTATTTATCATTTTAGTTTCTTTTAATAACAAAAATTATCCTG
TATCTTTATTACAGTGGCAAAAGGTGACAGAAAGAGGAAGCAAACTGCTG
CTGATGCTAAGATGGATGACTTTGATGCATTAGCTAGCACTCAAAGTAAT
AACACCACCAAAAGTTCAAGTTCTTCTCCCAACGCCAGTGAAAGTTTGAA
TAACAATGAGACACCGGTGACTCCTAAAAAGCAGGCTGTTGAAGGGATGG
TCAATACACCATCACGTTTGTTTGGGTCTCCATCACTCTTGCCGTCCCCA
AGATTTTCACCTTCCATTCCACCCAATGCCAGAGGTAAGAAAAAGTAAAA
TTCAAGAACATTTTTCTTTAATTTTTTCTCAAACATTTCAGAAATGCATT
ATTTAATTCTTACCAGCTTTTACTAAAATAGTAAACCCATTAAATACAGT
GGGACTGGTTTAAGTAAATGGTTTATGTATAAAGTCATTGCCTGGTCATG
AAAAGTTTTGCGTTAATGTTATTTCTTGTGCTTATGTCAAGCCTTCTCTT
TCAACACAGGGTATTGCAAATTGATTGTTACTATTCTTCTTTAGACATCC
TTGGATTTGTTGGCGTAGTTGCAACGATCAGCCAAAATCAAGCTCGTACC
AGAAATTTCTTCACGGTGCATCTCAAAACTGGCAAAACTGATTTTTGCAA
AATAATAATCAGCAACCATAAAGACATCAAATCAATAAGGCAAAAATTTC
TTGACGCCTTTCATAACAAAACTGCCATCCGTGCCGGCAAATTAGTACCA
GGGAAAGAGGTATATTTTTTTAACAGCTACTCTTCAATCTCGGACATTGA
TGACAATGAACTCAGCTTTGGTTTAAATGATGCTGATGCTGTTCATCTTT
CTGATATCGATGAGAATGGAACGGTTCTTTCAGCGGTTGGAAAAATCAAA
TATTCAGGTCCCACTGAGATGAAAGAATATGATAAGTTCGGCAAAACCAA
AACAAGTCTTATGCGCCCTTGCCTTTTCTCTGATGGCGTGAAAACTGTCA
GTTTGTCCCTGTGGGGAGACTTTGTTCATCTGGTTAGAGAAAACACACTC
ATTCAATTGACTTCACTTTCCTCAAAAGTGATTAACGAGGAGATTTGTCT
TGGTACCACTTACTCATCTTCAATTTGTTACCTGACAGCAGATTTGGACG
TTGAATTCCCAGAACAGGTTCTCAGCGAAGTTGACTTGTCTACCAAGCTA
ATAACAACGCCTGTTATAGCTAGCGTTAAAGTGGACAACTATTGGTCATG
TAAATCATGCCAAAAAAGGTTAGCACCATCCACACAAGGTATGACTTCCT
GTTCTTCATGCAGTAAGGATTTCAAGATTAGTTACCTTAAATTGCATCGA
AATCTATTTAAAGTTGTCGTATTCGTTGAATTTGATGCTCCGGAAATGAC
AGTGAAATTATCAAACAACATCCTTATCGATATGTTCGGTTCAGAAACTC
TGAATAATATCGACACAGAAGATGGTATGAACGACCTCAAGCTCAAGTTG
CTTAATTCTGATTTCAGTTATGAAGTTGATGTTAAAAAGAAAATAGTTAT
GGAAATTGTGAAAGCTGAAGAAAGTTAAGACTTCTTTTTTTCGCACAAAC
TTTTGAGAGGTTAAATCTCTTAAAAGAATCCTTAGACCATGATTTTATTA
TGCTTCTATTAAAAAACGTAGTAAAGACATATTTTCATCATTAAAGATTT
ATCAATGTACATTTTATCTTATAGTGTAGGTGGGTTGTCAGATTTCAATC
TTCGTTTGAGTATAATGGGTAGAGCTAAGTTTTCATTGACATTGATTCTA
TGGGACCTATGACTCTTTGAGCCTCAAACTGTTCTTATTTGGTTCTTATT
CTTTGGGGTATTTTGGGTCCTTTTTGCCTTATTTTTATTTTTTACCTCAT
CTTACCTCGTTTGGACCCTTATTTGATAAAAAATTAGACATCCCAGCCTT
CAACTTGTTCTTATTTTTTGGGCATTTTAAGCCTCATTGTTTTTATAAAA
AAGAGTATTAGCTTTTTTATTTTCCCATTTTGTTAATAATAAAAGAGGCG
TAGAAAACAGATTTTTACCAAAAAAGATTTTTTTGTTAAGATTATTTAAA
AAAGAGACGTAGAAACAGATTTTTATGAAAAAAGATTTATCATTTTTCCC
ATTTTGTTAAGATTATTTAAAAAAGAGACGTAGAAACAGATTTTTATCAA
AAAAAGGTTTATCATTTTTACCACTTGTTAATAATTTTAGAAAAGGTTTG
TAGTTTTTATTTAGTTTAGTTTTTTATAAGCAGGTCATTTATGATATAAC
ATTTGTATCAAAATGATTCCTTTTTTTTACAATAAATGGATTTGCTTTAG
CCATTTAGAAGTTTTATTGTTTACGTATTTTAGCAATATTCCATACATGT
ACACATTTATCACCATTATACCCTTGCAAAGATTTATCAAAAGTTATTTA
CCTTTTAGTCTATCTTCATCGTTATTCGCAATTTTCCTTAAATTTCTTCC
CAAATTCATTTAGTTGCTTGAAACTGCCCTTTTGTATCTCTAAAGTAAGC
AACGTCAAACTTTTGTTTTGGTTTTCATATAGACTATAGACAGAACTTAA
AACACACATGTCACGGGAAAAATGAAAATTGAAAACTGGTCCAAAAGCCT
AAAATTTGTACTAAATTTCCTAATTTCTAGTCTATTTTCGTCCTAATTTG
TCCTATTTTACTAACTAAATGGCAAAAAAATTGGCTTGGAGGCCTGAACG
GTTTCCCTAGCCTGTAGGCCACTTGGAGCTTTTTGATAGACTGGATGACG
CTGGTAGCCAATTTTTTTGTTAATTTTACTTTGCCAGCATAAGTTTTTTG
TGCCTACTCAGCTTTTTTAAGATAAATCGATAAACTTTAAGGATTTTTTA
AGAATGTTGTTCAGCTTCAAATTTTGTCTGAAATATGGTTCTGTTGAGAA
AGTTTCAAATTCTTGTTTTCCATTTTGGTTTTTATGTTTGAAGAAATTTA
ATCCCTGCAAAACTTAATCTACAAATGGTATTGCAGGAAAAATCTTATTT
TTGAAATGAATTTTATGGCAAATTTAGTTAAATTCACTTTTTTTATTTTT
CAAGTCTTAGAAACAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066234TCONS_00066234Clytia hemisphaericatranscript
TCONS_00066233TCONS_00066233Clytia hemisphaericatranscript
TCONS_00066232TCONS_00066232Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066233-proteinTCONS_00066233-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_451supercontigscaffold_451:723740..733105 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.93	11.05	17.14	17.42	56.52	42.19	37.78	39.54	17.37	18.1	13.95	28.71	19.18	19.38	22.87	26.84	21.15	16.86	19.42	24.61	35.18	60.87	13.57	19.98	18.15	23.71	37.47	33.02	31.88	24.74