XLOC_041440 (gene) - C. hemisphaerica

Overview
NameXLOC_041440
Unique NameXLOC_041440
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_451:239980..245757-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041440 ID=XLOC_041440|Name=XLOC_041440|organism=Clytia hemisphaerica|type=gene|length=5778bp|location=Sequence derived from alignment at scaffold_451:239980..245757- (Clytia hemisphaerica)
GGATGATAGTTCTCTACCGAAGTACTGCAATGTTGATTATTTGATCAAAA ACTACATCAATATAGGTAAATTGAATATATTTCACAAAAATGTATCTGAT TTTTCAAAACAAAATATATATAGAATATTTTATATTTATTACTAAATTGT ATTTCACGCCACTTTCTCACAAACCCACTTGGACCCGGGCCTCTTCCCAC TGGAAAAATTCTCCAAAATATCGTCCCCGATGATAATTATTCTCCAATTT TTGTCCCGCCACTAAAAATAATTGAAAAAACCAATCTTCACTGCAAAATA TTTTGCTTTTTTTCCCATCCCCACTGAATTTTCTGACATTTTCTGAAATT CCCAGCCATTAAAAATATGGGAATATCAATCCCCATCGAGTTTTAGTCCG TTATTTTCATCCCCACTGGCTGAAAAAATTCTATCGTGTCGAGAAGGGGG TGTTATTTCAGTCACCGCACGTTATTTTTAAGAACAAGCTGTATGAGAAC AAAAGACTTTGATGGCCAAAATAAGAACATTTCAAGACTTTGCGGACTCT ATTTCCCATCATAGCATTACATTATTTTTAAACCAGAAATGTGGCTCGTT TTGATATTGATATCGATTATTATCTTGTAGGAAAATCCATTAACCATATC ATCCAAAGCTATACCTACAAGTGTAACTATGTACGGAGTTTTTGTTTTAT TGATGGGATACCATTTTGGTACCTGACAACCAACACAAATTTGTACAGTT ATGGAGCGTTCTTTCAACGTTCCCCTGGTAACGTATTTCTTCTTGTTATT CATGATATGCACCATTGCAATGGCTTCTGACGTCATGGTCCCAACAGCTG ATTGGTTGAAAGTGACGTAAAATCAGTCAATACATCACTTTCAACCAATC AGCTGTTGCGTCCGTGGAACACATTATAATGATGTATATCATGAATTATT GTTATACTCAATATGTGACTATCACACAAAAATTTAAATCCTATCCCGAC CAATTGAGAACCCGTTATACCGACAACCGCTATGTTCATTTTATATCTGA TTTTGAGTGAAAATTTTATCGTTCTTCTTCTTGCACCTTTATACAAACCC CAATATTAAGTTCTTATAGATTTTAACAATCATAGTGTTTACACCCCTGT TTCACAGCCCTGTTGGAACTTCTTTTACAAATTTCTATCGAAATAGCAAT TGTGATAGAAACTCTATTGTTCCTAGGTCATAAAATAAAGTTTGATGTAG TAACCTTTTCCATTAATTAAATGAGGATCAGCAAAGGAACAATTTTAAAG TGCTGAAATTGTTTATTTTTTTCAATTAGAGAAAAATTTTGGCCAAATTT CCCAGCGGCGCTGGGCTCCCACCAGTTCTGTGACACGGGGTTATTTTTCC GCATTGGAAACTTGAATTTTTATGAAGAAAAGGAAGAAAAAGGTTTGAAA CTAAATCTTTGGCATTTCTTGTTTCAGTTTCCAAATGCAAGTACATCTAT ATCCAACTAGACCGCGGTAATGAAACTCTAAAGGGAAATTTTGTTGATAT ATATGATTATAATGAAACTGGTCCAGGTAGAAATGTAAGTTTAAGCTTCA TTCTACGTCTAAGAAATACACCTTTTTATGGTTAGCTGCTTCGTATAAAA AGTCACCAAAATTTCGAGTAAACAAACCATTTCATTGGCTAAAAGCAAAA ACATAAACAAAAAGATGTCCAGAGTAAGAGCACAGAAAACGCATTTTCTC ATACTCTACACATTTTTTTGTTTATTATTCATAGAATTATATTTCACAGG TCTATCGACCTCTACGAAATAATTTTAGATTTATAAATTGTCTAATTCTT CATCTGTCGTCCAGTCGTCAGAAGNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNGCATTTTAGACGGTTTTGGTCATCGTCA TCTGAGCAGGAGGTGGGAGTGCATGTTTGGTTTTGTTTAGCTTCTTCAAA TGGTTGTTTTTCTTGCTTTTTGTCGGGTTTTTCGTTCATGTTTTTGATTT TGCTAAATTTCAACCATTTTTGAAGAACTGCACAAAATGCGTGTTGACTT TATGTTTTTGCTTTTAGCCAATGAGATGGTTTGTTTACTTGAAATTTTAG TGATTTTTTATACGAAGCAGCTTACCGGAAAAAGGTGTATTCAATTAACA TTCTAAGTCGGAAATTTATGTATTACTTTCGGTTCTTCGGACACTCTATA GACTTTGTTGAGGAGCAAGCTCTGCTTCTCCGTTCACCACAAGTGATTAT GCGAAGCTCAACAATTGTTGCTTTTGAGCACTCTGGTGACACCAGCAGTC TATGCTCACTTACCCGAGCTGAATTGATGAGTTTTGGGAATGAAAAAGAC ATGTGTCTGGGGATAGAATCTTATGTATGAATGATTCAAATCTTTCGGTT TTTATTGGGAATTTTAGGCCTTCTTTTCAATGTGGCATAAACCTTTTCAT ACCCGTGCCGTGCAAAAACTTATCTTTATTGACGGTGGTGGCACTTGGTG GTGTAATCACGTAAGAAATTGTAAACTAGCTTTTTTGCTACCGTTAACAT GATTACTAACAATCGCTTTCTGTCTCTTCATTCTAGGTTTTCTACAGTCA AATTGGAACATTTACTGACGAAGACTTTGCAGCTGATGTCAAAGTTTCAC TTTATGGCTTCCCAGGAGGAAATTTAGCTTCATCGATCAACGTTTTGACA CCAAGATGTAAGAACACACACGCGTACAATTTTTTTTTAATAAGAACCAA TAAATTTTTGTTGAGGGTCGACTGTACTTGTTTTTTAACTTTGAGCCTCA AATATTTCTTACTTTTAGTGCAATAATGACGTATTTTAGCATTTCGGAAA TTTAGTCCCACTCAGGTTCACTTTACTCGCAAGTTTAAGAAAGATATTCA TAAAACGAGTCCCACGATAGCTGCACCTCGGGAGGAGTGTACACCTCGGG AGGAGTGTACTTAGGCAAAATCTGTGCTTTACAAACTTTGACTCAGACAT ACCCGTCATCTCGTAAACTTAGTACCCGCGACTATGTACAGCTAAGTGAC CAACAAAACTTTGACGAAGGCTAACTTTTACAATTCTTTTCTCAGCGAAA TGTGAATTTGATGCAATGCATGGCCTAATCAACTGTAAGTAACTTTCTTT ACATTACAAAATCAGGGAAAACGATGAACTTGCAAATTCTAAACTACAGT AATGAACTTGTCACGAATGTAGGGATTCCTTCTTAAAAGTAATCGAGATA TAGAACAACAACCTTCTTTATCAATGGTAGAAGTTTTAAATACAAATTTT GTTTTTCAGTTTGGATTCAGCAAAGAAAAGAAGGTGTCAGATGCACTATA TATAGTAAGAATTTGAATTACATTTCGACTTCTGTCGCTTCTTTACTCCA TTGTACAAACAGTTAATTTTCAAGCTGGGGAATCTCCTCTTATCGCACAA CGACCCAAACAAGAATACTCTTTTTCTATACACCTTTTCTACCGTAGCCG CCAATTGCCGCGCGGGCATTGTTTTGTCCGTTTTACCACCCTAAAACCGT TCCAGTCTTTTTTCCGCACCTATAGACAATAGAAAAAGGTGTCAAAAAAG GAATGGATCGATTTTAGGGGGGACGATTAAATAATTAAGTGGCACCCGCC TAACTGCACAGCTACGGTTGAAAAGTGTATTTGATTGAGTTTCAGTAAGC TCTCAGGCCAATTTTCGCAACTACAGGCACTTTTAATGACCCGTTTGCAC CTTGGACTGAATACCCATTTCCCTTCGCATTACATGCGGGTTGACCCGGG CGAAGGTATATTCAATTGCCAAGTGAACCGCTGCAAGTGGGAATCGAACT TCGGTCACCTACGCAGCAACCAAGGTCAATGACCACTATATCACAGCGCC CTGTTGATGACAATGAATAGCAATGGTTTAACAATCTGCCATTCTATTTC CAGAGAATAATTACATGCAAGTTGTTGCACGACAGTTCTGTGAAAGAGCA TTACAATCAGATAAAGAGAATATCAAACAAAACATTGGCAAATATTTGGT ATATATTGAACAAGAATGTATTGTATATTTCAAATATCCACAAGTATTAT CAACAAACAACAATGTTTCAGATCTTGAATCCAAGCTAACCTACATTGTA CCAATAGGATGTAGTGTGTTGATTCTGATATTTCTGGTCACCTTCTTGGT TTGCAAGAGAAGACAAATTTCGGATATTTGTAAATTGATGACTCAAAAGC CGGATAAAAAAGTGGTAAGTGCAATGACTTGATTGCTTTTTTTTTATTTC CCGTACAGAAACTTTTGCTCGGAACAGACATTGAATCAAAGTTTTCTTTA TTTTTTCTCATATCGATTCCAACGGTCTTATTTAGACCCGACAAACGCCG CCTCAAGTTCATATCCACACTAATCAACAAACGGGGCTTGCGAAGAAATC GGAGCTAATTTTTATTCTCTAGAAAACCATCAAAATCAAAGCTTAACCTC TGGGATTTATAACAGTTAACCCTTGGAGTTAACTCAAATTCTGAAAAGTG TAATTTTGAATTTTGTTTCCATTTTCTTTAGATTGCTGTTGTTGCCTTGG AAAATCTACCAACAGACTGAAAATCAAGGAATGACCTGTTTATTATGGCT TTAAAAGTCTTTGGTTTAAAAGGTATTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066219TCONS_00066219Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066219-proteinTCONS_00066219-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_451supercontigscaffold_451:239980..245757 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0.06 0.06 0 0.05 0 0.07 6.27 6.71 14.82 18.66 0.74 1.85 1.04 1.69 0 0 0 0 0 0 0 0 0 0