XLOC_041360 (gene) - C. hemisphaerica

Overview
NameXLOC_041360
Unique NameXLOC_041360
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_449:35669..39251-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041360 ID=XLOC_041360|Name=XLOC_041360|organism=Clytia hemisphaerica|type=gene|length=3583bp|location=Sequence derived from alignment at scaffold_449:35669..39251- (Clytia hemisphaerica)
CTCAAATAACTCTGCCTTTTGATTGATAACTTAGATAGTATCGGAGAGAG
AAAAAACATATATCTTGTACTAAAATGAAACTACTCTCTAAAGTAAGTTA
GAGACTTATGAGATGGATAGACAGAAACGGCAAAGAAATGATATTGATGA
GTTTCCTTACAGAAGACCAAAACTGGACGACGATCAGGAGACATCCTGGG
ATGCTCAGTTGGTGACGTCAGAATCCAAATCACCTGAAATGAATGAAAGA
AATCAATCGGAACAAAATCTACAGTTTGGAGATATATTTTCAGCATGGCA
ACAGCAAAAATCTGGTAAGAAATCTGTTGTACTTCTAAAATGATTTGTTT
GAAACTCATTTGATGACGAGATCTCTGCTGTTTTTTTCTTATCCAAATCC
TTAAAGAATTCAGTTGCCGATAAACATATCTACGCGTAATTTTCGGCTTT
CATTTTATATGAAAAGATCCGGTATCCAATACCAAGGGATAAAATAAAAT
CTTATCAATATCATTGATTTTGTTTCTCTAGAAAACAATGGCTCCAGCGT
AAAAGAAGTTGATAGCGATAAAGCACCATACATCGTATTGGTTGGCAATG
TAGGAAGTGGGAAATCAACCATCGTTGAAAAACTAGCAGGTGTTGATGGT
CGAAGCTCTTCATCAGCATCCAGTGCAACCAGATCTGCTGAATATTTCTT
GACTCCTGATCAAAGTCTTCTCATTGCTGACACTCCAGGAACCAATCCTC
GAAAGGATAAACTGGAACATAATAATGAGATTGCAGCTGCATTGAGTTAT
CGAGAGGTTTCCAAATTCATAGTAGTTGTGAAAGCAAGTCTACGTATGGA
CCAGACACTGGATGATATAAAGCAGTATTATGATCGATTTAATGCTCTCC
CTGAAGATCTTGTCGGTGTTTTGGTGACTCATATGGATCTCCACAAAGAA
TGGGATGAGGAAGAAATATTGGAAGCTATTGACGAGGACTTCGAAATTAC
AGACGTCGTTTTCTCAGATCGCCAAAAAAAGGGTTTCGACCTTTGCAAAG
ATGTTTTAAGAACATGCAGAAAAACTTTTGTAATAGATATGCAGAGTGAC
CTGTTTTCAAGACTTTTCAGGTTTAAGGATAGTAATCGAAAAATTCTAAA
AGTCACAAATGACTTCGTTAAACGATTTAAATCACTCAAAAAAAGTTTTG
AGGGTCAGAGAAAGAACTTCGATGAAGCAGATCGGTGTCATCTTGATTGC
GAGTTCTGGGCACTGTTCAAAACACATCTTACCGAAACAGCAAAACAGGA
CATGGTAAATGAATTGAATTTCAATTTTGAGAGGGAGACGAAAGATATGG
AGGAAGGCTATCTGATGAACATGGTCAATCAAACTAACGCCGCAATGAAT
GACATACAAATTCGAATCGCTCGAAATCAAGATCCCTATGCATCCACCAA
AAATTGCCCTCATTGCGGTAGGATTTGTGAAAATCCAAAAGCTCAAACAT
GTGGTAAACCAAAGCGTATTGAGCTGTCAACAAATTCTCCATGTACAATG
GCACATTTTACATTTAAAATCATTGACTACAGAAAAGTCGAAATACAGAA
AAAAAGTTTTGGTGGTCAATTTCAGGATAACAAGACAGGATGTGGTCAAA
AAATCAGCTGGAATGAAATGATGAAAGTTAATCATCAAAAAATCACACAG
ATACAAAATCAGGGTCCAGTAAAACAACCTGAATCTAATCAGCGTCCAGT
GGAACAACCTAAATCTGACCATCACGCAGATACAAAAAGCAGACAAAAGA
CCAAGCCCAAAAATCAACAGCCATTAAGTACAAGTGACACACAACGCATC
AATCATGGTAGATCTCTACCAAAGAAGAATCCTACAAAGCATACTCATAC
AGAACCACCCAGATATGTACACCAAAAAGAAGAGGCTCCGAATCAATCTT
CACAACCCAACAAAGGTGGAAGACAGAGATCAAACAACGACTTTAACCAA
AACAATAAGTCGGCGAAGTACCACCCATATGACTATTCAGAAGAGGCTCC
GAATCAATCTTCACAACCCAACAAAGGTGGAAGACAGAGATCAAACAACG
ACTTTAACCAAAATAATAAGTCGGCGAAGTACCACCCATATGACTATTCA
GAAGAGGCTCCGAATCAATCTTCACAACCCAACAAAGGTGGAAGACAGAA
ACCAAACAACGACTCAAACCAAAACAATAAGTCGGCGAAATACCACCCAT
ATGACTATCCAGAAGAGACTCTGAACCAATTTACACAACCCAACAAAGGT
GAAAGACAGAAACCAAACAACGACTCAAACCAAAACAATAAGTCGGCGAA
ATACCACCCATATGACTATCCAGAAGAGACTCTGAACCAATTTACACAAC
CCAGCAAAGGTGAAAGAGGTATTTCAAACAACGACTCAAACCAAAACAAT
AAGTCGAGGAAATATCCACCAAAGGACTATCCACAAGAGACTCTGAATCA
ATCTTCACAACCCAGCAAAGGTGAAAGAGGCAGATCAAACAACGACTCAA
ACCAAAACAATAGATCGAAGAAGTACCCACCAAAGGACAAACCAGAAGAT
GATGGCACAGTACCCTATCCTACACATACGCCTCCAAAAGGAGGTTACCA
ATACCAACGAGTAAGAGAAGATAAACCGTCACATANCCTACACATACGCC
TCCAAAAGGAGGTTACCAATACCAACGAGTAAGAGAAGACAAACCGTCAC
ATCCTGAAAAGTTAAAGAATCCAGCTAAGGGGGGACATAAAGAGAGAAAT
CGAGGAAAAACCTCACATTCAGCCTCAATGCAGAAATCTACCGATCCAAA
TCAACCAGGAGAGATAACCCAAGCTATATCAAGTGCAGATTACAAAAGTG
AGCCAGACACCACCTTACTGCTCAAAGAGCCGAATGAAAGGAGTATACGC
CACCTTTTGAAAAGACATTTTTACAAAAGTTTCAAAAGCATTAGATATTG
CATTCCCACGTTTTTTGTTACTGTTAAAATCCTACAAAGAATTAACGAGC
ACGTATTCAAGACATGCTTTGGAGATAAGAACAGAGAGTATAAGAAGCAC
GATCACCTCATCCCAAAACAGCCAAAAGAACAAAACATCGAATATGTTTA
AATATGTAAAATTAATGAATTATCATAATTATAGCGATTTAAGTTAAAGG
TCACATTGGATTTTTTTATACTCTTGAGTAAAGTGATTGAGTGAGTCCCA
GGGGTGAGGGGGTGCTGGGTTTACAGGGTAATAGTTTTTCAATTTTTCTT
TCAACCCTTACAGGGACTGCCCAGGTTTCAAAAAGACATCTTTAAGGGCG
GCACTCGCACGTACCCTTCACTTGCCTAAGTACCCCTCCCCCCCCAGTGA
GTGAGTGAGCGAGCAAATTAAAGTACGTGATTAGGCTGTAAAAAACAACA
CCGTAATTGTAAGTTTATCAATTATGTAAGATTATCTTTATTTCAGTTTT
TATTTAAATATTGAAACCTTAATGCAGAATGTTCCGAGATAAAAACTCTT
TCCAAAAGGTATTTTTATTAATTTCGTTTTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066043TCONS_00066043Clytia hemisphaericatranscript
TCONS_00066042TCONS_00066042Clytia hemisphaericatranscript
TCONS_00066041TCONS_00066041Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066042-proteinTCONS_00066042-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_449supercontigscaffold_449:35669..39251 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.01	0	0	0	0	0	0	4.62	3.33	0	0.02	0.7	0.48	10.89	12.63	1.69	1.73	1.33	1.97	1.77	1.46	0.25	0.26	0	0