XLOC_041357 (gene) - C. hemisphaerica

Overview
NameXLOC_041357
Unique NameXLOC_041357
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_449:45529..50441+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041357 ID=XLOC_041357|Name=XLOC_041357|organism=Clytia hemisphaerica|type=gene|length=4913bp|location=Sequence derived from alignment at scaffold_449:45529..50441+ (Clytia hemisphaerica)
AAACAATTTGCtagttttggcgcgaaaaagccacaacaaaacagaaaaac tcgaaacgaaggaagacaATCATTCCAACCACTGCTGCATTCTACAGCAG AAAACTGCTGCTTGAAAGAATACATGCACAAACAGTTTTACATATTCCAT TCCCTCATTAGAAGACTAACAGTATGGCAGACTCTGTAGGTAAGATACAC ATTCATTTCAATAAGACCAATTCTGTAGTACCACCGTGCGTGGTGAAGTC GGGTAAAAAACCTGCATAGGACCCTCCGTGACGCCTGTACAGCCCGTACT TGCATCAGCATCAGCCAGTTGgtgtggagggaaacttgcatcatagtcat caaatgcctgaccatttagagcagcaaaatttcaaaacaaacgaacacgc agctccgctcgctgCTCTACTCAGGACcatgccgacgcaccggacttaac gaacaccggacacgcgaaagtccggtgtaaaatgagaattttttttacca ccggacaatttctacaccggacttaaggaagtcggatgtccggtgtcaga gaatgatatttttcccactggacaatcaaaacaccgacatgaccagtccg gtgcgtcttaattttttgtttcataaatgtccggcgttcaaaattccctg tatgcaacaccggactgacaccggacttattgtgtccggtgtagcgaaag gatactttttgccaccggacaaatacaccggacagtccggtgcgtcggca gggtccgcTCTACTCTACCATGATGTTagaatcttttatttttttatttg ctgCAGTGTTAGGGCAGTAtggacctaactcttcatacaaaaattacggg aaacgcatgtttggactttgtaccctatgctgcacgcaagcacttaagcc aaagtcccgcaaaggcgggacaaaaatcagttttttgaagtttgcaaaaa aatgccacatacaagaagatctttcaaattcagtatgtgaatagagcggt aaaaaatacaacttttctatttttctttttatttgcaaaagttctaagaa tgaaaataaagggataatgataattgcatactacagttaggaacatttgg cgagttcctgtacgcagccgcaatcaaaaaaatcataacgtcactcaata aaaaatggcgttcgtgtcttttcgcactttttttaGCCTAGACGATGTAG CAAACATAGTAAGTgtaagcacactgtgcttttaattggctgacaatttc ttttgcgtcggaaaaactttttcaaactttcagcaatgattgatcAAACT GTTACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNacaatgaaaattatccagcgcattttttatcttct taccttcttcatcttcaatgaagaactcaaagtttactgaaagtaagcac ataagatattcttatgattaatgatattcatttaaacacgcttcgttatg cgctgcggtggagtgcattacgtaactcgcgcggcaactaactcgccttc tgttggaagatcatattgggcgttttggtgTTACCACCTTGACGCAGCga gcgcctttgtctttccgcaactctttccaccattttagatggccttaaca atagatccaaaagggcgccataatcttggaagataattNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNgtgttttcgatggaaaatggtaagaaacttaagtttacaagtg tcatttagtttttgctggcttatagaatggcaggatcctggatggtttcc ctaactgtacTATCCAttgcacgtgcgtttggtttgggaacgcgaaacac gaatgcaaactacccatgtctaaacttttcaatatatctccagaactaac agattttttgaaattctgtaaagaggtctaagttcctgaattgttttact atgttctgtgaaaaaatcataacagttacaacctttcgtccaaagcaaaa gacgtgcttttctcgctgCCATCCTGTTTtcgaatgagaattctagagaa tcCATTCGTTTTCCAGCTCCCGcagtcttttttcatccaatcagatcgcg cgatttcactttcgctttctctagtccaataagactgcgggatttgagtc atgtgacatctctattaaaaaacccgtgcgaaatacagggggtcacaaaa tagaaatacaaggggtcacactactggctacaggaactgaaagcaagcaa ttaaggccaatatttttggtttttctgaaggacaaaaggtataggaagNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNgcttcgcgtactcttcgctagAGAAAATGatttgacagattgaag tttttctcCCGCGCGGGCGTTCTGCGCACAAAATGAATTCCATTATTTGT GATGGTGCATGCGTTTAGTTTTTAACGTTGGGTGCTGTTTCGTTGAAGGT GGAGTGCCCACATTTTTGTTACAAATAGCAAAATTACAATGTATTTTAAG CCAAACATCTGAATTTTAATGATTTAATTTTGCCATTCATCAATCCTATG CGATTTCACAAGTTTTATTTTGGCAAACAAAGCAAAAACGCAAAATTAAA TCTTCCAAAAAATTAGTCAGATTAAAGTAACTGAGTTCAAATTAGTGTGT AAAAATAAGTATTTGCCCATAGACAAGATTTATTGACGCTTGACTTTTTC TAGTTACAGAAAGTTCTAAATATTTTACTTCAAACGTCAAACCTCAATTT TTACCCTCCTCATTTTATCCTCACACTAAATTAGTCAACCACGCCCTTAC ATTACCTACCTGCTCACTGTTTTGGATTGTTTTGCATTATAAACCCTAGA CTTGCATAGTGTATAAAGTTAGTGtacaaagaaatttatttttttacata gTGGTAACATAGACACAAGCCTGTTTCTATTCCCTAAAATTTGCCCGGTA TTGTCAGGATTTGTGACAGGAGTTGTATatgtcaaaaaagaattttttta tatttgaaaagaaaatgatttgaGCTTTCAAAGCTTTTAACAGCTTTACT TCTTGCAGACattaaaaaaacaagttttaattcaaaatttttatatataa ccTGGGCAAGCCCTGGAAGGAAATTAGAAGTATTTTACTATTGATGAAAT CTGATGAAATACATAtgcaattttttatctttagGCTCACGAAGATCAAG CCGCCAGAGTTCAGAAAGGAAAAGTTCACGAAAAAAGGCACTTGAAAAGA TCAAGTATAAATACATTTTTGTCCTATTTTACatcggtttttttttaaaa cattaaatGAATATAAGTGTTGTGTCTCTGCACCTCgacattttgtcaaa aataccAAATATCCTATCTTTATTTTACCCTGCCCACCTAGAAGCTCAAA CTACCCTATTTTAATGGGAAAAAGTCCTATCCTCCCTATGAAACCCTTCA TGAAAAGTCCCCCCCCTAATAAGGAAGGGGGAGGGGGGCTTACACTATAT AATATCTGAAAATACTGACAAAGCTAAAGGTGTAAACACCCTATTTtata gtttttagtttttaaggGACAAAATACCCTGTGTTTCTCTACATTTTCTA ATActagaaattttcttttattctttactaTAGGAAAAACAGAGAAACTG GAGAAAAGATTGAGTATGAGGTAATCTAGAATATAAGCCCTATCTTGACA GCTTCTTTTTAAATACTTCATACACAGTTTAAAAGGATAAAAAGATAGTT GATATTTATATGTATATCAACAATATCACTTTAAAATTGTGGTTGAAAAA CACTCGATATCTCCATCAAATTTAAGAGGAAAAAGTTTGCAGCATTTCTT GAGAATatttaatgtttttgtttcagtttgaagatgaaaaagacaTTTAT GATGTCGTTGATGAGGATAAATATGCTAAAATTGTTCAAGAACGACAAGA AGAAGATTTTATTGTTGATGATGGTAAGATatgattaattatttttttga tggtTGATCTTGATCATTCATTATGTGCATTTTGTCtgcaaataaataaa aagtggGCAAAAAATTAAGGGAGGTATCTTAGAAAATGACGAAATCTTTT GTGATGTTGAATCATCAAGACTACCTGTCTTTTAAATAGCTCTACTGGCT TTTCAAGATGATTATTTGAGCAACTCAATAAAGTTTTCAATTTCCCTAAT TTCAGATGGAACAGGGTATGCAGATGATGgtagagaaatttttgatgatg atCCAAATGAAATTCCTGATAAAGGTAAAAGTAATTTTTGGTGTGCTATT TTACGttatttttaaagataaattagtgaacaaaattaaagtttatcttt atttttttaaatcatattgacaactttgaaaaaaaacttatttgatAAGA AtctttattgaattttttttctaatttataGAATTTGAGAAACtcaagaa aacgaaaaaagAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066038TCONS_00066038Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066038-proteinTCONS_00066038-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_449supercontigscaffold_449:45529..50441 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.57 3.63 61.47 55.39 6.97 4.82 5.84 5 8.02 13.25 9.06 8.21 5.12 3.2 5.69 8.51 15.29 14.1 0 1.06 6.67 6.6 2.61 3.36 3.65 5.79 3.56 1.61 1.25 1.52