XLOC_041323 (gene) - C. hemisphaerica

Overview
NameXLOC_041323
Unique NameXLOC_041323
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_448:475152..478699-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041323 ID=XLOC_041323|Name=XLOC_041323|organism=Clytia hemisphaerica|type=gene|length=3548bp|location=Sequence derived from alignment at scaffold_448:475152..478699- (Clytia hemisphaerica)
TTTGACTAACATTGTATGTTCTTTTTTTTATCTTTTTCAGATAATTAAAT
AAAAATAACGAATAAGAAAATAGAAAATTAACTGAAAAAACAGCAGACAA
GATTTCAGTATGTCAAGGATTTTGAGTTGATGAGCCTTTCAGAGTTATGG
AGAAGCTTGTATTAGATATTGAAAGTATATCACGGCTTGCAACGAGACAG
ACATCAGTCAAAGAGTTTGCTACTGTGTTAGAACAGTTGGACGTTTATTC
CGGTAAGATCAGAGAGAAATTAAAGGAACCAAATCTACCTCAGTTACATA
GAGACTCTTTAAGAGAAATTCAGAAATGTATCTCTCAGATAATCAAAGAA
AATCAACAAACTTCTAAACAGGAAGATAACCTGCCACAGAGCCAAGAAAA
AGAAGAACAAAGAGAACGCGCGATAGGACAGACTATCATCAAAGCGGGAG
AAGTGAGATTTCAAGATATCGCTGGCCTAGACGTGGTCAAATCTCTTTTA
CATGAAGCTGTTATATTACCGGTGCAATACCCTCATCTTTTCACGGGGAA
AGTGAAACCATGGAAAAGTATTCTGTTGTATGGACCACCCGGTATGAATG
AATTTTTTATATTTATTCGTTTTAGTCCTTGTTTTCTATCATCAAGTAAT
TTTTTTTAGATCTTTATGACATTTTCATCGCCCAAATAAGGCAATTCTGT
AGTCTTAATTGGCCCCATTTATCTCAATTAATTAGACTTGATGCTTTCGC
TGTTAATCACCACGGGGCACTCGGTGTGAAGCGTTTTTAAGTCATATTTT
AGACAGCCGACTATCTATTCGTTCCTCTATGAAGTTAGATCGCCGCCAAA
ATTCGATCCTTCAAGTCGTCCCGTCGTACTAGAAGTCGTCCCGTCGCAAT
TTTCGGTAGTCGAATCATCCCAAGTTTCAAGTCCTCCCGTCGCACTAGAA
GTTCGCAGGTCGTAATTCTTTTAAGTCGAGTCATACCAAGTTTCTAGTGG
TTCCTATCAGAAGTTAACTCGTCGGAACTTGGTACATGTTCCAATCATGT
ACGTTTAACTGTTCTCATAAGTGTTCATGTCATCCATCAGGTATATCATG
GAGATAAAAATATAAATTCACATTGTTTTCAAAATTTTGACATGGCTCTA
ATCAATAAGTAAATTTCCACACGTGTGTTTCCACCAGCTTCCATTTTGAA
CATTGAAGTTTTCCCTGGGTGAGCTCTGCACGTGCACAAAAACTGCACAC
CACACGAACATAACATTATCTCCACAATATTTTGATTTTTGATATACAAA
ACAATAAAGTTTTTTTCCAGAATAGCCTAGAGTCCAACTTTTTGGGATGA
GTCGACTGCCGAAATTTGCGACGAGTCAACTTCTGAAGCAACGACTCGAC
TTAAAATTTGGAATGTTTCGACTTCCAAAAGATTCCGACTTGCAAACTTC
TAATGCGACCTGCGGACTTCTAGTGCGACGGGACGACTTCTAGTACGTCG
GGACGACTTGAAGGATCGAATTTTGGCGGTGATCTAACTTCATAGTCCTC
TCCATATTCTAATTCAGAGGCCAAATTAGTGATAATAGAGTATATACAAT
TATTGCTTTATAAATAAGAACTGGAAAAGAAAGATTTTATGCTCAAAGTG
CCAAAATTGCAAGAACAGCCTCAAAAAATATATATTGGATTCTTAAAAGG
AAGAGTGTATTGAAAGGAATTTGTTTGAATTTATTTCTCAGGAACTGGGA
AGTCAACGATCGCTCACGCAGTTTCAACAGAGGCCAATTGTACCTTCTAT
TCTTTATCTAGCTCTGATCTTCTCTCCTCTTGGTTTGGAGAAAGTGAGAA
ATTGATTAAAGAGCTCTTCTCCCAAGCTAGAAGCAACCCACGTGCTATCA
TCTTTATTGATGAGATTGATAGTATTTGTAGGAAACGATCAAGCAAGGTA
CTGCGGTAACATTTCGAGAATTTGGTAACCCAGGGGTGATGTTCAACGTT
TGATGGTTTCCCTTAATATTTATGTCAAAAATATAAATTTCTTCTTGAAT
TTTCGGCAAATTAAAGTAAGATAAAAACAAAAACAAAGTTCTATTAAATT
GAAGAATCTCTTTTTTACAAAGGCTGCAAGGATTGGTGTTTTGTGTTTAA
TGGGTTGAATATGATTGATAGATTTTTTAGCCATTAGGAAAACGTCAACC
GCGATTTGAGATGCCTTTTTTATTGGTGCTATCAAAAGGTGCATGGGTTG
CAGTGCTCAAAAGGGTATCTTTATCTACTGGCAGTATCCAGTCTAACACT
TGTGTGACGTACTTTTCTTCTGGAATGGCTGTTTTTCTATGCCTTACTTT
TCTGTAGGGGAGAAATTGGTGACAAAAACTTTTTTTATTTCCACAGGAAG
AAGAAACTACACGCCGTATAAAAAACGAACTTTTAAAACAAATGGATGGG
TTCAGCAGAACATCTACATCTGCTTCTCCATCCGACGAGCCTAAGAAACA
TCTCTTCGTTTTATGTGCTACAAACTGTCCTTGGGAACTCGATACAGCAT
TCTTACGTCGATTTAGTAAACGGATATACATCCCTCTACCGGATGCGAAT
TCGCGTAAACAGCTATTTCGCATCCATTTAAAAGACGTTGAAATGAGTAT
AGATGATTCAGATTATGACCAACTTGTCGATAAAACGGATGGTTATTCAG
GAAGTGATATCTCGAATTGTATTTCTGAAGCTGTTATGGAGCCGATTCGG
GAATTAAGAGATTGCTCAACGTGGAAATGGAACGATTCGAAAATGTCACT
TTCTCCAACGATTAAAAGCGACGCTAGCGCTATATCATTGCGCCTGGAGA
ATATACCACGTGAAAAAGTTCAACCTCGTAAATTAAATACGAAAGATTTG
TTTCACTCGATTTCGTTGAATAAGAAAACAGTATCGCAAGAAGAAACTGT
CCGATTTCAACAATTTACTGAAGATTTCGGACAAAATGGCTGATCAGGTC
AGTGTCACTGAAAATTCAACCTCGGCAAGATATTTGTTTTGAAAATTATT
GCTGATCAGATTTTTAACAAATGCTTTCCGACGATACTATCAGAGTGCCG
ACAAGTGTCCCTTTTACTTTGAGTCTTCAAAGAAGGGCTGTTCATTCCAG
CTTGGTCACATCACATTTCTCAGATATTCAAACTCAAGTAGGGCAAACTC
CTTGACCTTGCTCTTTATTTTCACATGTTTTAAATCTGTAAATTTATCAG
AATTGTACCCATATGATTGATGTTATATTTCTTTAATTTATTCTTACATT
ACGCCAGGATTTCATTTAATTAAAAGTGGTAACTTAGCCTCTACTAAGCG
ACTACCAGTTTCCATGATTAACAAACAACGGTTCGTTAGTGGTCAAGGAA
CTGGCTAAGGTAAATAATATTGACCAGTTTGAGTTGGCACTTAAAGGGTT
AACATATTTATATCAGTATGTTGGACGGTGAAAAAGAATGCGGCTATTAT
ATTTTGATTTTTCCCGACATGTTTCGGACTCGGTCCGTTCTCAAGGGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065970TCONS_00065970Clytia hemisphaericatranscript
TCONS_00065969TCONS_00065969Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065970-proteinTCONS_00065970-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_448supercontigscaffold_448:475152..478699 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.87	5.66	3.72	3.01	10.44	9.62	4.68	5.92	3.36	2.95	1.3	1.77	1.33	1.05	1.06	1.08	2.81	2	0.24	1.28	1.53	1.36	4.26	3.98	7.39	7.91	0.98	0.68	2.75	2.58