XLOC_041253 (gene) - C. hemisphaerica

Overview
NameXLOC_041253
Unique NameXLOC_041253
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_447:185722..189793+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041253 ID=XLOC_041253|Name=XLOC_041253|organism=Clytia hemisphaerica|type=gene|length=4072bp|location=Sequence derived from alignment at scaffold_447:185722..189793+ (Clytia hemisphaerica)
ACTGAACCTTAGAATATCACTTTTAGAgtattttaactgtaaattgccaa
CCATCCCCCACCCCAGTAAGGCTCgatactttcacaaaaatgccactGTT
CGCTTCAGGTATGTACTACATGTTAAAAGCTAGGTTGAATTTGGATTCTA
ACTTAAGAATACCTTAAGAATGTTCTAgaatgattttcgccaaaaagtta
agaccattcattcttataaaaaatcgtgtattttGAGGTGCTAACCGctc
acttttatttttagttaaTGATCATAAAAACATATCTACCGAGATAGCTG
GTGAAAAGTAAAGTAATACAATAATGGCAGAATCACTTAGAAATGGACAA
ACGTTTGGTAACTATTTCTTAAACAGTTTATCAGCACTtgtaaaattaat
atttttgaattaaatttcgtgatttttatgATTATTTATGATATTTTAGA
ACACAACAGACAATAATGACGCACTTAATGTGATGCTTGATTTTACTCTG
ACAACAACGGATAGACTATAATGTGATAATCCTTTCACACTCAAACTCAT
GACATGACTTGACATGACATTGGTTGACTATGACTAAATTTACATACGAC
TGATTGAACAAACCAACGACGCCATGTGACTGACTGTATATCTTATCACA
TTGttgtaatttgaaattaaaatataGGTGAGTTCTATTAGATGAATCTT
ATATAAGTAGTTTTAATGTAAAAGAATATGACCAAAGCACCGAAGAATAA
AAACATAATACAGGAAAGGAGTAGAAATCAACTTTAAACTAATGGACTTG
ATtatctgaaatttttattctcAATTTTAGATGATAACGAGGCACACGAG
ACTTCACCTGGCAAAGacgaagaaaaaaagaagacgggaagagcaaaaaa
tttaaacagtggTCCTGTTCTGAAGGTAAACGAAGAGTAGGGAAGATTTA
GTGTACAGGAATCTTCAAGAAAAGTCACCATTATCCCTCACTACTAAGAT
GATAGTTCGGAATTTATTTTATGAGTACTTTTGATTACATTCATACATTT
cattaattatattttattttttagaaatgtaAGTCCTGTCAAAAAGGCTC
CCCACCTGGATGCAAAATGTGTAAGCACTGCTCCACGCCGTTTGACGAAA
GGTCAAAAACAGTCAGAGACATGATGCCAAAATACAAGACAAATATAACG
ActcaaacaaagcaaacaagAGCTGATGTAAGAATGACTTCTTTCATGTT
TTAACCTAAGTGTTTGTTAGGATATGtcgctaccttaattcaaaaggggc
ctaagtccaggtACTCCCCAGTTCAAAAGGGCCTTagtccatttttatga
aatttgaaatctttggtTTTTCTCGATGTCTGGCTCATTTGCAATCTTTT
GATGTACATAACAAGTAGTTTTTAAATATGAAAAGGATCATAACTTCATA
CTGAAGCTCTGATAAAAGTgatgtttaattcaaaagaggcctaagtccat
caactttttacaaagaagggcctaagtccatcataTTTTTACAATAAAGG
GCCTAAGTCGTCCATCAAAATAAGTTTGTTAAGTTTAAAAGAGGCCTAAG
TCAAATTGAGTCCATGTATCCTAAAAAGTTTAATTGAGTTTTTCTTTAAC
TAACTGAGATTgttttttctctttatcttgAATCTAGGTGTAAGTGGCTT
TAATTTGGATTGTCATAATTAATTGCAggttttgaacttttaaagGCAGA
AATTAACCCTCACACATGTTTCTAATTcatgtttaattcaaaaaaagGCC
AAGTCAATTCTGCAAGATTTACTAAGTTGCACCTGGTACGTACAAAAATA
TCTATTTTCCAAAAGAATacctttttattgaaaaaacaaGTTCAAGCTAt
ggctttcagaaaacatttacttcaaagctttaccatcaaaaatggtttca
gaataaaggaaaaactttaattgctattttctcaaaatgaccaaaatgga
cttaggccccttttgaatttaGGCTCACAGGagttaggccccttttgaat
taaggtagcgatGTGTACACTCCGTTCGACGAGTTTTTTCTAGTTTTATA
CGAATTCCTGATTGCAACACACTCGTAACAGCTAGCTGTGCAGTGGTTCT
TCCTATAAAGCTTAAGGATatagaaatttgtaaaatcaatATTTCTCATC
TCattgttttaataaaaaagcaaactcaaaaacaaagacatttttaatTG
GTCTTGGGAATACTTGCAAAATATGTTTTTGTTGGCATTAAGTAACAAAA
CCTTTTTTAGTAAGTAAAGTATTAAGGttcttgaaattctttttgtttac
ttttattttcagatttacACCCTGCGACGAGATCACCATCAGGAGGTAGT
TTGTCTAACTATCAAAGAGAATAACGGCAGATACAAGGTGCGCTAaagta
ttttctttaatttttagttCATTAAACAACAATTTCTCACTGCAAAACCT
TTTTAGGGTTGGGTTTTTgggcttttttatttttcctggTGCTCAAAAAT
CTTACTGACTGAGCCAGccttctttgtttatttttgtttaggtTGATGCT
TTGACGACAAAAGGTTGGGCCTCTTCCTTCTGGAGTCATCACGAAGAAAA
AGGTGCTCCAGCTTATTTATTGAAACGTTGCTTGGAGAAAGCCATCACTA
CAGGTATTTATCATTTTAAGATTTACTCTCAGTTTTTATGATATTTACAA
CAATTCTTTTCGTATAATTAATCTTGTTTGTGGTATAAGAATCTTTTTCA
GTATTTGATCATTTtcgtcttcaaaaattttaattgaaggtTGGTAACAC
CATTCATAGTTcgggatgacaccttccaaaaaagtgaagaaggggggcga
gatcagaaattttcattaaaaaggggtGATAGCAAGGAGGGGTCCTTTAA
GAAGGGGGgccgtttaagaaggggggcttacatatattgtagattatttt
ccagcactatTATGAAATGTGGTCTGCataattggaaaatttttctgttt
gagtAGTTTGAGTCGTTTGAGTCAACAATAAGCAAGAAAgaagtttgtta
ttttttctcttttttctctttttctatcTGAAGATATTTTCACATAATAT
TTGCTTAGCCCAAAACCCTTGaaggataggcatttttaaaagttgggggg
atgccaagaagggggatcagacccctttccgcaccaTGCCATTTCAAAGC
ACGTTTTTCTTAATTCTGTTTTTTATTTAGATCCGCCATTAAAAGACAAC
GAGGTCGAATTTCTAGTTCAACTGGACGCTGGTGTTGAAGGTTTTTAACA
TTCTTTTGTGACATTTACTCTGTAGACCAACTTTTTATGCTTGAAAAATT
GAGCAGTTTTAGGACTGAAAACTAGTAATTTATAGGTCATATAATTTgtg
gtagaattttttttaaattaacaaAATGTCTTTTTATAATTTAGATTCTC
AAAATGAAGTTGAGAAAGAAAATACTGACCCAGTACAATCTAAGACAAGT
AAGTTTTTCAATTCATTATAAAACTCGTAATTACAGTAATTCCACAATAG
TAAACGACCCACCCTTTCTCAAATCCCAATGGAGTATGAAACCCATGGCA
CACAATATCTTAATAAATCGTTTTACCTCATTTAAGATTCTCAAACTATC
GCTATGGCAAAAGTAAATGAGGTAAACTTACAACAGCATCAGCAATCAAA
AACAGGTAAATGATATTTTTACTACATGGTATGTTTTTATAATGTTTGAA
CTACCACGAACTTTCGACCCATTTAATAATAACTTCATCAAATGtgcttt
ttgttttaatttatttcaggATCTCGCAGTGGGcctgttttcattttttt
ttgcaagtTTTATAGACCCAAGGACTTAATGCATTTTAATATTTTGCACA
AACTTTCAAACGGGTATCTCTCCATATTTTAAAGGCAAactaatttttca
ttgaaatgttTTATTCAGGTTGTCGTAACAACATCAATAAAAATGCTGCC
CAAGAAATTTCAAACACAAGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065853TCONS_00065853Clytia hemisphaericatranscript
TCONS_00065854TCONS_00065854Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065854-proteinTCONS_00065854-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_447supercontigscaffold_447:185722..189793 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.56	1.45	0.23	0.64	4.89	3.05	6.5	6.8	4.86	3.12	3.94	3.21	1.87	1.53	6.89	6.19	7.87	7.03	6.24	3.75	6.5	6.29	1.95	4.07	0	0	4.2	3.1	1.14	2.11