XLOC_041093 (gene) - C. hemisphaerica

Overview
NameXLOC_041093
Unique NameXLOC_041093
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_440:461310..466569+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041093 ID=XLOC_041093|Name=XLOC_041093|organism=Clytia hemisphaerica|type=gene|length=5260bp|location=Sequence derived from alignment at scaffold_440:461310..466569+ (Clytia hemisphaerica)
ataagtagTCGTTACTGAATGAAGGTTTTATAacattttgattgattgat gttTTGTTTACAATAGAGCTTATTGTTCTAAAACAAAGGTCTATTGTTTA GGAACAGTTTCTATTGTTTATTGTTTCATTGAAATGTGAGgcatcttata aaaactacAAGTGTCAATTTCAGAAGATCTGTTCCTTCAATACTTCAGTT ACCAAATCTAAAAGAGATTAATTTGTGAGATAAAAAACGAGGTGTTTGAT ATATACCTTGCTGAGATATGATGTATGGCGCAGTTAGTTCTACAGACGAG CCAGCGAATACAGGAGAAAACCTAATGGCGGATGAAcagcaaaaagaaaa tgagGATGTTCCTTCGATGGAAGAAGATAAAGAGCCAATAGACAGCAATG GAAAAGGTAATGATTTGATTGATTTACAAATTTTTATTCGGGGGTTCGAG GCAAAACGTGTATAGACATTTGTAAAATATAACcgtttaaaaaataatca tacaCGAGTTATGGTTACAAATATGGTTAACTTTTTTCACCTCAGCGCCA GATTCGTCTTGATGCTCAGGGCAGTACCCCTTTTTCGACCGGTTCGAAGA CAGTAAAACAGGACTTACTTACAGGActtttttgtgacattttttatatt tgacgtcaaaaagagtACATAAGTGACGTTTTTCTTGTATTTAAGGGTGA TTTACTCGAGCTACGTTGAGACATCGACTTTACCCATTTGAAAGTCTTCT GtattatttttcgattttcgattaAGTGAGATCACTCAGACACTTCATTA GCTCTAAATTTTCCTAATTTCTGGACGCCTCAGAAAACAATTGCTAGCTA TTTCAGATATAGTATATAGTTCGCTGAAACGCAAGTCCTTGTGTAATCAA AATATGATAGCATTTTAACCAGTTATTTAAGTAGATCATAATCTCTGTGT AATTAATGACTATAACCTCTTCTTCCATTCGTTTATGGATCAAAATCAAA ACTATAAGTAAAGTTTTGTAAAAGACCTCTGTATTCAAAGACCTCGTTGT CAATATATATTTTGCACTCTTTTTGCAGAAAAAGGCGAACCAGCTCTCAG ATTCTGGGTAAACTCGATACCATATCCTGGCCTAAAATGTATGGAGAGCT GGGTTTGAGTCACGCCCTTAACACAAGATGAATAGAAAATCATAGACAAG CCAAGGGTGGATTGATAGAAATAGACTAGACTTACTTTTGATAATGtatt attattttatcattttatgaTTAAAAACCCCAAACTTCAGACTGTAAAGA TTAAAGTTTATGAAAGCTTGCTTTGAAGGAAATATATGAGAAAAGTTTCA AGACTATTTGAAGGATAGAATTCAGTTTGTTGCACATGAGAAAGCATGGG TGAGTAGGAAATATCTTAAGTCTGTCTCATAGAAgtaaacttttaaaact tttctcaGTAACAACTAGTTGTATTCATTGCAATCTCTTCTGgtattaca tcacggacccaacagctaatTGGCTGTTAGTGACgtaaatcagtcaatac gtcactttcgtaaaaaagatgtcCCGGGACCCctggcttggccccctact atttgATATCTTTGTCAAATGTTCCAATGAGAAGGTGacataaaagattt ttaatACAGGATGTATCACGCAGGCTTGATTATTTGAAGAAGAGGCTGGT AAGGGGCTGTAAATCAGTCTCcataaatgagatttttttttctgatgtaA CTTGACTAAAGATAAAAGATAAAGCTGTCAATTTTTGAATCagataaaat ctttttttaaatgacattAATGCTGGCTAATTTGACTTGAGATTATCTAA TACCATATAGTAATCCATATTGACAAAAGGAATTTTGATAACCCTTAAAT CTTCCCACAAAgatttgtttactttttctcAGTCTCCCTTGTCCCTCCCT TGTCCCTCCCGCATTTTAAGATAAAGTAGATATTAGATATCGTAAGTCGA AACTCTGATGAAATTGTAAGCGCCAAGAATAaaacatttcttcattttca aaaagtttctcccttttgatgattttaaaacCAACCCTAACAGCAACAAC CCCTATACACATTGTACCGTACTTTCCTTTAACAATCTAAAATttccctt aacaatcaaaagcgCCGAGACAGCAAAAAGTGCCTATACCGTAGCATTTA GCGAATATTtgcgattttggtgcttttgattgttaagggaacttttggat tgCTATAGGTAAGTATGGAATAGATTTTAAGAACAAGGTATTTCTGAGAA CGAAATTTGAAGAGTCAATAGGCAAAACTTGAATATGTTCTTTTCACAAG TGCTTAAATACCGTTAACTCTTTCCATACTGCTCAATAAAATATCTTTGG AAGGATATTCAAAGCAACTAGAGGAGACTTGAAGATATGTTCACTAATTC TTAAACCCTGTAAAGACCTTgttattcaaattgaaatatttttcttcttc cgTAGCTGCCAACGAGTCAGAAACACCTACCGATCCTGATGAAGTCGAAA TTACCGAAAGTCCACGACCACGATGTTTTCCCGACAAATACATGCTTCCT GCAAAATTCAGTTATTTCTTTGTCATGGCTAAGGATTCTTGCTATCAACC ATACTTTATTTTATTCCTGATCGGGGTCGGGATGAGTCCTCGGGAAGCTG CCTTCATTAATGGTATTCGTCTTATAGGAATGATGTCGGGAGTCATATTC TGGGGCCACATGTCGGATAAGAAACAAAACCATAAACATGTGATCTTGAT TTTGACTGTGGTTGGCATGATCCTAATGGTCCTGAATCCGTTAATGGCAA TCGCTGTCGGCGACAAGAAACGTAATATTTGTCCTTATCCTATGGACACT GTCGGTAATGAAGCATTAAAGATCGAAGCTTCATTCTgggttttgttatt tttgaatATAGTGGCTTCTTTCTTTGATGGTTGTACTGTTAGTTTTGTTG ACGCTGGTGTGATCCAACGAATCAATGTTAGTAATCAACCAAAAGATTTT GGATTCAATCGTTTATTTGGTGTTTTTGGATTCTCAATCGGATCATTAGT CTCCAGTTTAGTGATCAAGAATTTCCCAACGGGAGATACGAATTGTTATA CAGGCATTTTTATTCTGCACGTTGTTTTCTCTCTTGGGTTGATTGTATCA TCTTATTTCCTGTTCCGTGGCGCTGATATGAAAATTCCACATAAGGAACG CAACTTGAATGTACGAAACCAGGTCTGGAAAACTTTTTCACAGATTGACA ATCTGATGTTTCTGGTCACATTGCTGGTTATGGGTACAATGCAAGGAGTT TTCATTAGTTTCACATCATTACAATTGAAGAATTTGAATGCACCAACAGA GGCCCTGGGATTGACGACTATGATTGCCGCAATGTCGACAGGTTTGTGTT TAAATTGACTTTTTTATGTTGATGCAAAGTCTTTGTCTAAGGTGTGTCAC TTTATTCTGCGTTTTGATAagactttttcaatttctacCTTAAAAAAACC ATTAGAATGATGTTTTTATCCCTTAAATTGAGAGAGCATGAATGTCAACA GGTTTATGTTTATTTCTAccatacacgttttctttataagaacatccaaa atttttaaagccttgggatattcttagctttttgagtttaaagcctaaaa atgttcttaacatgttcttattttcgccaatTTGTGACcaattttaccca ttttcccaagaaattgagtgtttttgagtccataaagccttaaaatgttc ttaacttgttctcaacattttggccgtcgaagccttatgttcttatatag tttgttcttataaaaaaccgtgtaACTGTGAAAGCCATGTTAAAAGTGAT GGCAACTTTAAGGTAATTCTCACTGTTTTTTTCACAAGAATTCAAGCCTC CATAACCCGATTCTCTCCTAAAAACTGAAAGTATTTTCCTGGTTCcttga aagaatattttgcctTCTTAGAACTAGAATTTTACGTAACTTGCAAACGA ATACATTCTCTTTGTTATAGAAACTCGACTGCAAGGTGGCTTCGTTAtaa tcatttttctttaaaccAATTTTCATTTTGCAGGACCAGCCACAGCAAGG TCCACCAAACTGATTGGTCTCTTCAAAAACACGTGGAATGTCACCATCTT CGGTTGTTTCACATATTTCGTCAGATACATCGCATTTGCTTACATCACTG ATCCATGGATTGCACTCCCAATctctattttccaatttttcggtCTCGGT TTATTCATCATTGCAACCATCCACCATGTTAAATCGATCTCCATTCCTCA GATTTACACCACTATGTACGGCATTGCCAACGCAACACATTTCGGTTTCg gttttattttggcgaatgttATTTACGGTCAAATTTACAAGTTTTATGGT GGTAAAACTATGTTTATCGTGGCGGGAAGTACAGCTGGTGTTTGGACAGC GGTACTCGTCATTTATAAGGCATTCCGTAAAGTGGTAGCTCCGGACGTTG ACGGAAACCAGGAACTGGAATCAGAACCCGACGAGAAATTACGCATTCGA GGAGAATCAATGAGATTTATGTGAATGTTATCAAATGTTAGCCATTAGTT AGAGATTTTCAGCGCATACATCGCTATAATAGAAAACTGCACAATCATTT TAGGAGAACTGCACAATCATTTTAGGAGAACTATTTACCTTCCATCAAAC TTCGAGGAAGCTTCGGAGCCGGGGAACTAACTTGCTGATTGAAACTGAAA CATGTCAGACAAGAGCTCGAACTATGGGCCCTGACAGGCAAAATATTGGA CTTTGTTGGATTCAAAATCTCTATAAAACCAGCCCTAATAAGTGGTAGGA ACTTCAAAAAGTCGACCTAGTCagttaaaatttttcagattttgtgaATT TGGGACACTTTCAGATATTTTCAGAGCTTGGAATTAAAGAGTTCTGAGCA GTGGTACATCCCGTGCCCTACATTGCCCGAGTGACTCCAATTTATTAGTA TTgtataaaatcaataaaattgtaactttttttatGTGTTTTAAACTAAT TTTTCTAATTACCATAAATCTGTGCGTGTGTATGAAATTTAAAACTATCA ACTATATACTTattagaaataaaaatttatttacatATTTACAATTATTC CCCACGATTTAACATATTTACCATTGTATAAGGATAATTTGACCAAAGTT TCGTTTTGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065583TCONS_00065583Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065583-proteinTCONS_00065583-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_440supercontigscaffold_440:461310..466569 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.68 11.33 31.73 34.19 5.38 4.17 4.3 4.59 2.88 2.65 4.41 1.83 9.14 7.89 2.12 1.37 16.96 13.58 9.06 7.07 35.03 39.53 7.36 8.95 8.31 9.63 9.69 1.4 5.77 4.19