XLOC_041083 (gene) - C. hemisphaerica

Overview
NameXLOC_041083
Unique NameXLOC_041083
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_440:198298..201723+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041083 ID=XLOC_041083|Name=XLOC_041083|organism=Clytia hemisphaerica|type=gene|length=3426bp|location=Sequence derived from alignment at scaffold_440:198298..201723+ (Clytia hemisphaerica)
GGCCAATTCGTTGTGAAAGTGTCCAATTAAACGAATTTGTCGAGTGGTAT
GGGTAGTCCAGGATTCATGTGTTTTAAGACTACAAAGGGAACTTCAGTAC
GCAACCTTGCtacattttcataaaattctGTTATTTTCTATAAATGCAAA
GGGCTTTGGGGATGTGCTAAGATAAGATATATTACAAAGATACACTGTAT
GGAATAACAAATAAAATGGAGTTTCTTATATGGTTTCTGACCAATATAAC
TTTGGTGTATTCCCAATGGTTTTCTGGCGAAGAGAAATTACAAGCCACAA
CAAACACTGATAAAGAGGATgtttcaaaaccttttcagGCAACTTCGCCT
AttcaatgcattttgaaatgtcaaagAAGGTCGAGGGAAGGTTATTTTGT
CGAAAATAAAGAGCAatgtttttgcttgaaaagtgAAGATCAGAAAATAT
TATCGGATGAGAAAGTCAATGGAATATTTTACAAGCCCGTCACTGTGAGT
AATGCAATTTTcgttattttatttatttatattttatccCATTCCAGACT
TCAAGACTTCacaaagttataattttctatatttttgcaaaaagagtTTC
CAGTTGTCGATACACTATTAGCAAAATAAAAGGTCAGGTGCCCAAGATTG
ATAATCCGCTTTTTACGGTCTTTGTACAAGATAATAATTTCATATCTCAC
TCTTGTAATCGAAGGATATACCAACGCCAAAAAATGTTCACCTACAgtaa
aagtcataatatttgagaaaaaaggggaattctcacgaaatcttatagcc
acaaacgatttggaagcggtATAACTTAgattggaagggtagagttttaa
tattagacttaagactaggctctcaggatccaaaagttcaagaataaaGA
ATgatccaatagggctcagaatatactCTGGAAGTCTATTAACCCCTCTC
GAATTGAACTAATCGATTAGATtcatcaattagcccaaaagtgactttct
cgcccgaactttaaattgctaaaaacgtTATCTGATATATGGCAggttgg
cggccgcccacgctaaagatCTAAAGGGAGTGGGTTAATTTCCCATTGGA
GAGGAATAATAGTCCTTCGATGTGCCGCATCCTAAGTCGGGTTCAACATT
CCTTGCCCGCAAACCtagaaatatttcggttggacccgccaatccccgaa
aacgagggctgggttaccagaacTCCtgctgcaaaatttttgacgtgaTC
TCGcaaaaattccgtaatgtaaaccttccagatgttgaaaattttcccga
ccttcagagctttagcgtatcggatgaaaatttcaccatctgggtgccag
ataactaAAAACgaagaattaaccaaaattttcaatataatttGACCAAG
ATTGTATACCGCTTAAATCTTAACCCTTAGACGGCAAAAGGCGTATATAT
ACGtcttgaaaaggtcattttaccgatacacagtcttttggtcataactc
ctgaccacttgagattcagagaaaaagaattcgctattttttgtagctga
gagaaaaaGCTTTCCagcgataccaaagttgatacctaaATCATTTGTCC
TGGTCAAGAAATggctttgaaagaataaatttccagaaaaaaatgatgaa
ctttttggcctttttcaaaaaagttttgaaaggtTAAGTTAGGTTAAGTT
CCAAGGTTCCAAGGTTTcgccattaaaaaaaaaatgtgttgtATTGTCTA
ACTAACTAACTTTCATTTCTAGGTGGAAAAACCGATTGACTCGTGCAAAG
CTGAAAGAAAAAGATGCCTTGATTGTCAATCTGATTTTTATGAACTTGAT
ATCGgggaagatgaaaagaaaaatgtctTCTGCAATTTCGAAAAAGATGA
GGGGAATGGAGGTGTTGGTGATGGGTCGTGCATGGCTATCAAGGAACATT
GTATAGGCTGTTCATCGGgattatattattttgaaattctcGGTATAGCA
ACAGAAGTTTTTTGTGAGATGACAGAGGATGGAGGtatgtttattaaatt
ttcaaGTTGATTTGCAAAGAGAATTTACAGTAAGATTTAAGTAATTCCAG
GGTTTCACTCATTCTTTGGCTAGGACTAATAAGTATATAATCGCCCGCCT
TTGCTAGCCAGGACCGATTAACTATTTGCGACGTAAAGAGGCCAGTGTGC
TAAATTTGGAGCTTTCGTTGATTTCCACGTCAACGTCCTtctatcagaat
catcaatagctaAAGGGGGACAGAAAAACCTACTTAGGTTCGAAGAtgga
aaatctcaaaaacacGCTTTTTTAAACTAATAGGCGGGTGGATGGCTATT
GTGAACATCACCTTCGACGACAATAGCCTGCTGGCCAACGCAATTGCAGT
TCTTGAGAAACCATCATTACTCAACCAGCTCAATAACATTCAAAGCGGTC
GCTTTTTATTAGCATCCGATGAATTGAAAAAGCTATTCACCAATGGAGGT
TACACAGAGCTACGAGTTAAATGCTTTAAAGTATGTGTTGCTTTTCTTAC
TTGATTTCTTGTTTAGTCTTTCgcaattctattttttttaccAGTGAACA
GGATCCTACTAGATAAGTTTGTAAATTGACAAGTTTTCGCACAAAACTCT
GGTTACTTGTTTCTCGTGTATGTTTTGAAGTAAGCATAATATTCCATCGA
TATTTTGTCTAAATTTCGCTTTATCTATATCCAGCCATACCATGGTCGCA
CACTCCATGCAGCCATAACAGGAACTAAATCGTTGACATATCTAAGAGGA
AAAGGAGTGGTTCGAGGTGACGGTGGTCATTGTCAAGGTAGTCATTGTGG
TCTATGTGGTGAAGTACGATTCCTGGCTGATGACACCTCAATCATGGGTC
AACGAAACTGCTCACAATTAGGCATGGGAATGGAGATAACAACAAGCCTT
TATGACCACGCTTTCTTTGTATGGGGTGAGCGACATTGGTCGTTTTTGAA
CAAACATGAAGATGGTTTTGTGCGATTTGAATGCGACGATTTTAGCGCTG
ATTTTAATGGTGAATGGATGGTCTATGTCCGTTAGTTATTGCCCAAGAGG
TTATACAGTCAACttcctctaattcgaacctctccTATTCGCGAATCTTT
CTAGAATTCAATTTGAATATTTGTACCCTCAGCTAGAGAGCAATATAAAA
Tgctttctgtaattcaaatatttctcaaattcgaagaaaattcttggact
cttgaatcgaattaaagagagtcaactgtacatTAATTAATCGTAATCGT
GAATCGAGTCATTTACTCGATTCCATATTcattacgcacggagcgagcgt
tagcgagcggagtgcgactcttttggcaaacgcatgcgcgtaagcaaaat
ttacaaaatttcaatgatatgcgggt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065553TCONS_00065553Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065553-proteinTCONS_00065553-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_440supercontigscaffold_440:198298..201723 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.08	0.07	0.03	0.15	0.1	0.03	0	0.03	0.02	0	0.2	0.1	3.56	2.71	0.09	0.03	0.04	0.1	32.87	15.28	0.1	0	0	0.24	0.93	2.22	0	0.04	0.03	0.03