XLOC_041060 (gene) - C. hemisphaerica

Overview
NameXLOC_041060
Unique NameXLOC_041060
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_44:358273..368602-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041060 ID=XLOC_041060|Name=XLOC_041060|organism=Clytia hemisphaerica|type=gene|length=10330bp|location=Sequence derived from alignment at scaffold_44:358273..368602- (Clytia hemisphaerica)
CTTTCAGTGTGGTTATGTGAGAGTTGTTTCAGCAAAATATAAGGTAGAGA AACTTTGGCAAAAGCGTAGAACATAAACCGCAAACTGAAAGAGCTATCTT TTTATTAAGAAACACACTGAATTGGCTAAATGTTTTATTAAAATGTCTAA ATTCAACTATCATCAATTTATACCTCGGGGAAAGATACTCATTGATTCGA GTTCCAGCGAAAATACTTGCACCCATTGAGTTTAAAGCCCGAAGGGCTAG AGTCGAATCTCTAATCTTCCAGAGGCAAGAAAAAGTGAAACTTAATTCTC ATCCAAAGTGGCTTCATTTCCCATCCAGGAGTCTCGAGTCTAGCCCTTCG GGCTTGGAAGTCAATGCTAACTAAGACTCATAATTCAATATAGCAAAGAA GGTTAAAGTTTTCATGTGAAACTTATTTTTGATAAAGGATATCTCAAATA TTTTGTCCTATAGAGGAAAAAGAATCACCGGGCAGAGTGAAGCAGTGACA TACAGCTCTGAACTGTAAGGGGGGAGAGGTAACAAATCGAGAAAATCTGA TTATTCATTTCGAATGTAGTAACGATATGTTTTTAGGATTAAATTTCGAT CTAGTTTACCGATTGATGATCCAACTACGAAAAAATTCCAATTTTTAACA TCCTCGTGCCAAATATTGTACCTCTATTTAGATTTTTTCGTAGCGACAAA TTGAATTTTCTAGCACTTTCATCAGCAATTTAAAAAGATCCGAATTATAT ACCGTATTTCATTTGTCCTCTATTAAGCGCCGCACCTTAATTTTTAGTTA TGAAAAAACCACCACCCTCTAACCGTCGCCCTCCAATAAGATAAAACCAA GAAAATCACGAGAATATATGGTACACCTACTAAGTGAAATTATTTAAACC AAGGCAAGAATGGCGACTTGGGTGTCACTAGGACGAACGTTTAACAATGG AGCGAGGATAACTGCTAAAACTGTTTCCTCAAGAACGGAAAATATATCGG AGCTGATGTGATGTGATGAATTTTAGGTACACTGTCGCGAGAATAGCTCT CTGCCATGGTAAACGATTTTCAGATATAATTTCTTTTCGGACTTTTTTAT ACTGGGATAAACCACATCGACAAACCGTCGCTGTATCTAAGGAGGATGGG TTTGAGTTTACAAGGGTCGAGAAACGTAACTAGCACTAAATTTGACGTCT TTGGGCCCTTGGTTCAATGTTTTTGCCACCCTTAGAAAGACTATTTTCAC AGAATTTAGTCGAAATTTCAAGAATTTATGACCCTTCGAGGGTAATTTTT TTGTAATTTTAGAGCCCTTACAGAGACTCGATTGCTTTTTAATGCTTCAA CTATCGAGATGGATACCATATTTTGCTCTTACAAAGAGATGCTTATACAA AAACATTTTGAAGGCATTTTAAAAGAGTACTTGAACTAAAAATGTCCCTT TTACATCAAGAGCGTTCATAAGAAGGATCTTACTAAGTATACTTCAACCT GACATGTTTATGAAAGCCATATGACTCAACATGCCAAAACAAAAAANNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 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CTCCGTGAAGTCTATTAATGCGAACTTCGCTTGTTGAAAGTTTTTTTATG ACTCTCAGTCAATGAAGTAGTTGCCTTCATCTGATCTATGGCCAAGAGGC TAAAACTAGCCTAGATAATAGCTCACAGTGATCTGTAGTAATGAATACCC CGATTTCACTAATAGTTCAAAAAAGTGCCAACACCCGGATCACAACAGTA GACAACAGCCTACTTTCTCCTAAAAAGAGAGATTCACGGTTGGCGGCGGA GCAAAATCGAACCATTTTTTTAACAGAGTTGTGGATCTCGATGAAAATTT GGACTGGCAAAGAGTCGGTCGGAATATCTCAGAACTGGTCTCAGAAGTTT CGTAGCCTATACTAGATGTCACCCGTGTTTTTTCTACGCAATGAAAACAG AATGAAAAATCCCGGTTTTTGGTAAGGTGCTCGGTAGAGTTTCCGGAACG TTTAGTGAAAATTTCAATGTCAAAGATATTTTCGGTCCTTTAGACTGCTT GACGATAATCAGAGGGGAAATTGACGGAATCAGGTACCCCCTGACATTAT TCTAGATAGATAGATAGATGCATAATTTTGTGCATGCTCTGTGTATTTTA GGCTTAATCATTTGTCCTAGACCACTAAACACTTCAAATAAGATTGACAA GTTTGCTTGCATCAGATTAACTGCTTGACCCTTTCCTAACTTGATTTCAA CATTTTTCTCATGATTACTGACCACACTTTAAAAGGATTAATTTTGCATC AATTTTTTGATACAATTTGTTTGAAAAGAAAACAAACTAAGATTTTCATA CTTTTTTTACTGACCATGAAAAGTGCCCAATTCATGATATGCACCATTTC AATGTCTTCTGACATTACATCACGGACCCAACAGCTGATTGGTTGTAAGT GACGTAAAATCAATCAGTACTTCATTTGCAACCAATCAGCTGTTGGGTTC GTGGAAGACATTGTAATGGTGCATATCATGCATAGCAATACACTTATCAA ACTCGCAACGTCACTGAGGGAATTGTGTTCAAGTTTAGAGATGAATGCTA TCAAATATCTGTATCCGTGACAGCGTCAAAACAACGGGTTTTGGACGTCC TCAAACAAAGGATAACTCGAACCTTTTTATTTATGAAGTCTTACCAGTAG CGTGGTGGGTCGACCAAAATTCGGGCAAACTGGGGCGGTAATTTGAGAAA ATTTTGATTTTAGCGCCTCCTATGAAAACTAAATATCGTTTTGAAATAAC GCGAGCGAAGCGAATACGAAAATTTTAGGGTTTTTTTTATCTCTTTTTGG CCGAAAACTGCCATACCAAAAGTGTAAGAGAGCAAAGGGGCACCGAAATT AATAATCAGAGGCGTCTTTTTGCGTCCTTTGTATTCCGGCGCCCCTTTGA AAAACCTCCCCTGGGAGAGGGGTGGGCATTTTCCCCCATCACATTTTTAT TAAGTACCAGAGTGTATCTCACGCATAACGTAGCGCAGCGTAATGGATTT TGTAATTTTCGTAAATGTCGGGTCTGTTTACAGACAACATTCTGTTAAAA AGTTAACGCACAAAATTGAGTGTTGATTCTTTCTCTTTAGGAAACTGGCA CTAGTGTCTTCCAATCTTTTCAACCAGCAACAACAAATTTGTAACCATTA CCAATTCTGGACCAAAAGCCAACGAACTCTTTGTATGAAATTTACAGAGC TTATCCCAAAAGTCGCGGAAGGCGCTGAAATGGCTTATGATGAATGCAGG TAAGATGTTGTTATTTATTGATAATGAAANGCGCTGAAATGGCTTATGAT GAATGCAGGTAAGATGTTGTTATTTATTGATAATGAAATGGTTTATATTT ATCATATTTAACGCAATAAAATCTCTACCCGAGATACTGTGTGCAATATT ATTGGTTTAGCGTCTTCTAACCCCTCAAAGCCAACAAAGGCNATGGTTTA TATTTATCATATTTAACGCAATAAAATCTCTACCCGAGATACTGTGTGCA ATATTATTGGTTTAGCGTCTTCTAACCCCTCAAAACCAACAAAGGACTAA TTTTCAAACTTCTGCTACTGTAGCTTTACGAGTACAGACAATCTTTCCGT GAAGTAAGAAATCTTATAACAATCGTATACTTTTTGAAGAAGTGGTTTTG TTCCAACATTAGCGAGGTTGATCTAGCACAAAACTGTTATTTATGGTGTC GGTTCCATTGGTTCAGTAATGCAACTCTCCCGCTGATTTTTCTTACGTAT ACCGGCCGCCAAAACGGCTGTAAACTCCGCGCGTATAATATTTTCCCGCT TTTACTATCACTGTAACGGACGGTAACACTGTCTACGTTTTCTGAGGCCC GATTTACAGGCTATTTAAAAGACCTGAAATTTAGACCTTTTGGGATTTTT TGAAGGCATGTCGACTTGAAACGTGTTTGATAAAGTTAGAGAAAGAAATT AGAAACTAAGAAAGCGCGTTTGGGAATAAATATAACACGTAAACAAAGAT TGAAATGGGGAAAATCAGACCTCATAAGCTTGATATTAAAGATCAGTTTG TACACCAAGCATAAACGTTTGATCCTACCTACATTTTCAGACACCAATTT CGCTGGCGTCGTTGGAACTGTGCAGCTAAGAAGCCAGTATTGACGAACAA TGTATGGACATACGAAACGAACGAATACCCTTCCCTGTTCGGAGAGGATT TTGAACCAGGTAAGGTTTATCCTCTAACCAAATTTGAGGCAAAATCGACC TTATGGTATATTTTTTTGGAAATTCTTTGTCCTTCATAGAGCAGAAAGTG GCAGGATATTTGCCCCAAAGGTTTTGCAATACATTATTTTTTGGTCTTTA CACACCTTAAAGTACACTGTCCTTAACACAGTCCACTATTGGAAACCCTG AAAATGTGTACTATTGACGACCAAGGGGCAGGCGGGTTTAAAAGGATATT GCAAAAATATTTTAAAAACTGTCATACCTTGACCCGTTTTCTATCCTTCA TTCTTGAACAGGTGGAATCGAGGCTTCATTTGTCAACGCGATTTTCTCAT CTGGAGTTGCTTACTCAATCACAAAAGCATGTTCCTCAAACAAATTGGAA GGTTGTTCATGCGAGCGCAATAAGGACGGAACAATTACCAAAACAACAAC AACAAAAACAACAACAGCGCATCACCTTAGTAACGGTTTCCAATGGCATC AATGTAATGATAATGTAATGTTTGGCTTGTCATTTGCAAAGAAGTTTATT GATAGTGTGGAGTTAAATTGGAACCCAGATCGCATGTTCACGACGCATGC GCAGGTTATGATGAACCTACATAATAATAAAGTTGGAAGAATGGTTAGTA TAACACACGCGTTTTTTATGAGAACTAGTAAATTTAGGCTTGGCTGTTCT TATTTTTTCGATTTTCAGACTGTTCTTAAAATGTTCTTAATATCCTTACT TTATTCACTTACTGACTTAAAAAGCGGCATTTTCATTTTTGAAATTCTGA AGCTTTAATCTGGTCTTCTTATGAAAAAGCGGATGTGGGTGTTATGGAAT TTCATTTTATTTTAAAGATCCTGCTCCCCCCCTGGGGACGGAAATCTTAT ATAGGGTTTTAAGATTTATTTCTAGGAAAGCTTCATTGTTCTTTAACTCA GGGAAAGAACCCCACACAACTATTAATAAGTATATGTTTTTCAATTTCAG CTCTTGAAGGAGAATTTACAGCAAAATTGTGTCTGTCATGGAGTTTCTGG CACGTGCAGCACTCAAGTTTGTTCCAAACGTCTCGGACCTTATAGAGACA TCGGTGGTCTATTACGAAAGAGGACTGAAAAAGCAATCAAAGTGACTTTG AAATATATAAATACACATCGCATATTGATGCCAGCTGATAATCAACTGGC TCCAGTGACCGACACTGATCTTATTTATTTGAAATCATCACCATCATATT GTAATAAGACTACTGGAAGGCGGTGTAAATTGAACAGTAAAAAGAAGGCG AAAAAGAAGCCCCGTGGAGGTTGTGATATGATGTGTTGTGGTGCAGGCTA TAGGACTAAATTACGAACTGTGACGAAGAACTGTAAATGTCAATTCATTT GGTGTTGTAAAGTCACATGCGAGAAATGTTATCATCAACAGAAAGTTCAT AGTTGTAAATAAATAACAGACGCAGGAGCTTTAGCGAAGGAAATTGGAGG GAAATGCCAAGGAGGTTCAGCTCGCTTTTTTTGATTTGTAGCCTTCATTT GATTTCAAAAGCACGATTGAAAGACGAAGTCAATATTTCAGCAAAAAAGA AATTTGAATATTGAAAAGATGTTCATGGTTGTTAAAATTGAAACATGTTT TTACTTTTACCATTTAGACCCTAATGCTGATGGCGTAGACAATCGGAGAA AGTGAGTAGGAAATTTCGGATATGACAAATCAAAGATCATGTGTATTCTG TACGGTTGAATAGATAATCTTTTAAATTTATCTGGAAAGCCAATAAATAT TTGTAATAGACAAAATATTTGGAAACTTTACGAAAAGAGACATGACATTA GTCCCCCTTTAATCCTTTCAAAAACGCAATGTATAACGGGAGGACATCGT GTAAATATGATTTTTTAGAGATTTTGTAGTTTTATAATTTATAGACTTTA TTTTTTATGTACAAAAATTGACGATTTTAAAAATAAGCAAATTTACGACA AAAATTGGTAGTAACTATTTATCATCGATAGATTTTTCAAAAAAAGAAAT GGATCTTGTTAACATAAATTCAACAAGGAATTAACGTGGCTCTCTAGAAA TTATTAGACCGAGTCTATTATCTGATTTTCCGATGGCGGATTGGCAGCCG CCCACGCTAAAGCTCTAAAGCAGCCGGCAGGCTTCCCCTCGGATAGGAAT GATAGTCGACCTTTGATGTGTCGCATCCCAGTCGGGTTTAACTACTCTTG TCTCCCGAATAGACGGGGGGGGTCCGAATAAGCAGGGAGGTAGGGAAATT TTCTAAATTCTAATAAGCGAGGGGGATTGAATAAGAGNAGGTTCAGCTCG CTTTTTTTGATTTGTAGCCTTCATTTGATTTCAAAAGCACGATTGAAAGA CGAAGTCAATATTTCAGCAAAAAAGAAATTTGAATATTGAAAAGATGTTC ATGGTTGTTAAAATTGAAATATGTTTTTACTTTTACCATTTAGACCCTAA TGCTGATGGCGTAGACAATCGGAGAAAGTGAGTAGGAAATTTCGGATATG ACAAATCAAAGATAATGTGTATTCTGTACGGTTGAATAGATAATCTTTTA AATTCATCTGGAAAGCCAATAAATATTTGTAATAGACAAAATATTTGGAA ACTTTACGAAAAGAGACATGACATTAGTCCCCCTTTAATCCTTTCAAAAA CGCAATGTATAACGGGAGGACATCGTGTAAATATGATTTTTTAGAGATTT TGTAGTTTTATAATTTATAGACTTTATTTTTTATGTACAAAAATTGACGA TTTTAAAAATAAGCAAATTTACGACAAAAATTGGTAGTAACTATTTATCA TCGATAGATTTTTCAAAAAAAGAAATGGAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065529TCONS_00065529Clytia hemisphaericatranscript
TCONS_00065528TCONS_00065528Clytia hemisphaericatranscript
TCONS_00065527TCONS_00065527Clytia hemisphaericatranscript
TCONS_00065526TCONS_00065526Clytia hemisphaericatranscript
TCONS_00065525TCONS_00065525Clytia hemisphaericatranscript
TCONS_00065524TCONS_00065524Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
unclassified Wnt ligand X1BTCONS_00065525-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_44supercontigscaffold_44:358273..368602 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
WNT2protein Wnt-2 precursor Homo Sapiens
WNT1proto-oncogene Wnt-1 precursor Homo Sapiens
WNT4PREDICTED: protein Wnt-4 isoform X1 Homo Sapiens
WNT2Bprotein Wnt-2b isoform WNT-2B1 Homo Sapiens
WNT7Aprotein Wnt-7a precursor Homo Sapiens
WNT7BPREDICTED: protein Wnt-7b isoform X1 Homo Sapiens
WNT5BPREDICTED: protein Wnt-5b isoform X1 Homo Sapiens
WNT5Aprotein Wnt-5a isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09 0.04 0.05 0.1 0.54 0.49 9.05 8.96 10.51 10.08 4.36 6.67 5.05 3.52 4.47 6.39 5.06 3.66 4.44 5.66 5.06 4.39 5.57 4.91 5.96 3.85 0.76 1.21 1.85 2.68