XLOC_040973 (gene) - C. hemisphaerica

Overview
NameXLOC_040973
Unique NameXLOC_040973
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_439:220533..224873+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040973 ID=XLOC_040973|Name=XLOC_040973|organism=Clytia hemisphaerica|type=gene|length=4341bp|location=Sequence derived from alignment at scaffold_439:220533..224873+ (Clytia hemisphaerica)
ATTTAgaataaatattaaatatttattaaaattctGAATGAATGAAAGTT
GATTTGAAAGAAAGAGTTTtacaaattctaaaaaaatgcttaaaatttta
caaaaatacgATATAACAGCATGAAAGTATAGAAgtgtatgaaaaaaatt
atttcccaaaatttaaaacaacaaaataaccACGTTTACAcaaaattata
aattaaaaCACAATTTATGGTATATCTATAGAACGTACgaaaaaggataa
aaaacaGGCAGTATGGCGTATCAAGGTCGATAAAATGTAAACGATAAAAA
GGTAAAAACATTGTGGATCGTGGGGCAAAGTGTCTAGCTTGTCCAGAATG
TCGTGGTTTTGAAGAGCACATTTTTCGATTTACGTTCGTATGAAATCGTG
TGAAAAAAAANCCATTAGCGATTTTAGAAAGGCATTTAATACAATTGACA
TGAAGACTATGTTGTACTATCTTTGTACTTCctcaagggaagaaattttg
ttggaaagaaaatgaaaacttgactgattttgtggatttttattttttcc
accaTCCGCAAAATAagattcccgccaaatttaatttcgtTCGACTTTTC
ACTATTTAGACCTTGAACAggtttattttcaacattttcactCTGATTTT
GATACTTGATTTTGACCCTAAACGggtttattttcaacattttcaccctg
attttgaaaccttgaaattcatggtctgccaaattaaattcccgccaaaa
tttcttccctgaaGGTAGTTGCTTatgataaaaaatgtgtacaacaCTTG
AACGGTACCGAACATTTATCTGTCACCTTGTAGGTTTTAAGGATGGAACG
AAAATCATTTAgaataaatattaaatatttattaaaattctGAATGAATG
AAAGTTGATTTGAAAGAAAGAGTTTtacaaattctaaaaaaatgcttaaa
attttacaaaaatacgATATAACAGCATGAAAGTATAGAAgtgtatgaaa
aaaattatttcccaaaatttaaaacaacaaaataaccACGTTTACAcaaa
attataaattaaaaCACAATTTATGGTATATCTATAGAACGTACgaaaaa
ggataaaaaacaGGCAGTATGGCGTATCAAGGTCGATAAAATGTAAACGA
TAAAAAGGTAAAAACATTGTGGATCGTGGGGCAAAGTGTCTAGCTTGTCC
AGAATGTCGTGGTTTTGAAGAGCACATTTTTCGATTTACGTTCGTATGAA
AtcgtgtgaaaaaaaaaaaaaaatcaccaaaacaaAGCTCTAAACCTTTT
AAGTCACTTTTAAAgttttacagcaaaaaaaatctataaaaatatttcta
taaaaTATGCACAAAAGTTcaagaagaaaattgaaaaaaactcacCTTAA
AAATATATAGAGACCATTTACAAAGGAGAGTGTCAGATAGTAGCGAATAA
TAGGGATCTTAAGAATCCTGTGTTTCAAAAGGGTTTAAAAATTTCACCAC
TGCAAATTTAATCATTCTATGGGAAAATATAAAAGGCGTTGACAATAAAG
ATAATTCTAAAATCTATCAAAATCTTATAGACAAAAACCTCTAAAGCTAA
AAAGTCAGGCTTAAAAACATAAGACCGGGGGCAATCTGCCAAAAGGGACC
tctcattttaaaatttatcataaaAAGGGGATCtctaaaaaatctaattt
ctaaaaaaaacatatctAAGAAAGGAATGGCGTCTCCAATAAAATTATTT
AACAGATAGCGACATTTCAGTGTTTACACTATGCTCTGAATGATCAACTG
ATAAAGTTGCATGTCCGTTTTTATTTCCGCCATCAACCACGTCCGGTATT
TTAAAAACATCAGTGGGTGACGGAACTTGATCAGATTCGACATCAGATAT
TGTGCGGTCATGAGTTGATGTATCCGAAGACGactgcttcttcttcttct
tgaatAAGCTTAATGTTTTTCTCTTAGTAGGCGATTTAGGAGCAGGCGGT
TGTTCTTCGGCGTGTTCCGCCACAGAAACCGGGCGTTGTTTTTTATCATC
TTTCTTATGACTCGGGTGGATGACATCGGCAAGGAAATCAAGACTTTTGG
GACGCTTCAATTTCTTGGacgaatttttcttttctaatttaTGATCGTCA
TTATGCTCCCAGATGTCTGATTCGTTTTGAGGGGAGAGCTGTTGTTGTTT
CTCTTTCTTCTTACTACTGCTTTTACGAAGACCAAACTTGAAGcgtctct
ttttctttttctcagtGTTTATAGAGCCTGTCATCGATAAAGAGTCATCG
TCGGGCGAATAAATACTACTAGCGTTATCATCATGTAAACTGACGTCCAT
CATTCCGTCATCATGTCCGTCAGTGACGTCATTAGTGACGGTATCATCAG
CTGGTTCGACTGATATTTGAGGTATCAATTCACTGGTTGCTAACGGGCTT
TCCAGCTCTCCTTCGATCGTCGGTAACGGTTCGACTTTTTTCTCGTCCTc
tacgatgacgtcattgttgtTATCATTCATCATTTCTTCTGGCCAATCAG
AAATCGACACGTCATCAGTGATTTTATTCTCGGAGATTCCCTCGTCAACG
ACTTCTTCTTTAACGGGAGTCGGTGTAACGACAAGTTCAACTGACGGAAG
AGGTTTCTCagtttctattttatttttcgatttctttttcaatcttaatt
tcttctttttagtgGTAGAAGAACTATCTTCGAATGGTTTACGATCGATG
ATGCTTTCTAACAAAGATTTCACCTCCTCTGAGGCTTGAGCAGGACTTGG
TGGGTCATCTTCTGGTGACACCAAATCCTCAACAGAAGCTACTTGTCTAC
TGTCGATCGAAAAGGATGCGTCAGACTCAATAGGAGCTGGTGAAGGTTCA
GGTTGCTTGACATCAATAGAAACTGACTGCTCTGGTAACGTTTGATCAAC
ACCAGTATCAACGATTGGCGGTAAATGAGTAGACGATTCCTCGATAACAG
GATCTTCAACTTTGGCTGCAATCTCCACCGATGTGGTCAACTCGTTATCA
GAATGTTCAGTGGAACTTTTACGACTTCGTCTTTTCATTCGTGACATTAA
AGATCctgatttctttttcttctcattGATCGGTTCTTCCACCTTTAGTT
CTGCAGCGTCCGTAGCTTGAACAATTTCGGTGGGGACGTCAATAGCACGC
TCTTGAAAGTCACTCTTGACCGGAGTTGCACTAACGAGTTGGACGTCTCC
CGATGGTGTTTCCGacatatttttgtttgaaatattgGATGACTTCTTTT
TCTTAAATGGAAATCGCTTCTTTTTGCCGGTGGATACTGGTTTGGATTCT
TCGACGGGTGGTTTTTCCAGTGTCGGCGCCGGCTCTTCAACCTTCGCCAC
GGGTGTAGCTTTCGTTTCGAGGGAAGCGCCCCAATTGTTATCAGCTTTTT
TCTTAGTAGCATTCTTGGAGCGTCCTCCAGGTGAATTGGCTTCAAACATG
CTTAAAGTACCAGCAACTGTCCCTGATACAGGTCTTCCGTTGGAGCCTCT
CAACGATTCCTGCCGTCCTTCACGCAACGAATTCAAACTGGTTGTCGACG
ATGATGATGGACTCTTTTTAAATTGACCTGAAGCCTTTTGatcaaataaa
agtttgttttgtaATACCGTACTGGTCCGAGGTGAACCACGTCTGCTGCC
TGATTCATCAATACTCCGTCGCGAACTGATACTTCGGTTGGATGATGATC
GAGACATCAAAGTGGGTGAATCAGCTTGTGGTGGAGTTTCAGCCTTTGGT
GGAGTTGGTATCTCTTCAGTTTTTCGTCTGTTTTTTAATCCCTTCAAGCC
TTTACTTTTCGGCTTCTCAGCAACATTATCTGATTGCTTTGGTAAAACTT
CCTCTGGTTTAGATTCTGAAATTGGAGCAACCGGTACGTCGACATCAATC
TTGATTTCTACATCGGCTCGTTCCTGGTTGTCTGTGAAAGGGACGTCAAT
GTCTGATTTCTCGATAAGAGATTCTTCGGGTTTCTCGTTTGTGGAGATCT
CAACTGAAGGCTTTTCTGGTGAAGCAGCAACATAAATGTTATCTGAAATA
TCATCAAATGTAGGGGATATATTCGACGTTGGCGATTGCGATGAAGGAGG
TGTCATTCCAATTGCTGATTCCGGTTCCTCCTCATCAAGGTGGACATCCA
ACTGCAGATCATCTGGTTGCTCAACTCTTGACGACTTACGACTGGAAAGT
TCGACATTGCCGACAAAATCAACGACGACGTATTCCTCTTCACCCAGTAA
ATGTTCTTTGGATTCGACACGTCGCAATTTCGGCTTACGTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065350TCONS_00065350Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_439supercontigscaffold_439:220533..224873 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.3	0	0.48	0	4.38	2.22	6.24	3.74	4.43	6.55	0	2.87	9.77	5.99	11.16	7.08	1.55	6.61	9.03	10.79	0.44	0.44	1.51	0	2.38	2.38	3.8	4.42	0.71	1.99