XLOC_040857 (gene) - C. hemisphaerica

Overview
NameXLOC_040857
Unique NameXLOC_040857
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_433:62979..68136+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040857 ID=XLOC_040857|Name=XLOC_040857|organism=Clytia hemisphaerica|type=gene|length=5158bp|location=Sequence derived from alignment at scaffold_433:62979..68136+ (Clytia hemisphaerica)
ttgatttttttttcaaaatcttttcaaaccaaatcgattttatttttaat ttcaaaataattttcaaatcaaatcgaatttcaatctgaaaataaaataa aattgattttttggccATTGCTCCAAACCACTATACCTCAAAACAACCTT TGCTGAACGCTCGGAAAAGGCAAGACTGGCAACTGGCATTCCTTTTGGTT ATGCACGCTGCTGTTTGGTTTTAGTCACAAAAGGTAAGCTCACATGAATT CTGTAAGATTCGTTTATAGTATAGTATATACCTTTTTTCTTGACTACTAG GCCTGGGGGTACTAGGTTGGTTTGCTATTAACAAAACCAACCCTGAGCTG TAGTTTTTGGTATACCTGAGAGCATGAAggtaataagaaaataaagaatt cTAATTTTCTTATTACCTTCATGCTGAGAGGGAAAATTTATGGTTTTCGT GGGGTTTTGGGGCCCTTTATTTACTACAGGACAGAGTGGGTTGGTTTTTG TAACCCTTGACTGCTCTTGGAGAGATATTTTCGAGGTGTGTgcgtgaaaa aggtacccttaactTGGCCATCAGTCAGCATCACTTGACTTGCACATACC AACATACATACTACCCATACACACCCCCAGATTATTTTAGGCTATTAAAA AGGAAGGGATCTGCAACACAATCCATCAGTCCCATCAAGATGATATAATT TTTTCTCAAGGCATCCTCACTCCATGACAGACCACCATAGAATGAATGTT CAATTCACACAGCTTCCCTTTATAAACTTTCACCTGGACTCTCCTCCACA GAGTCTAACTacactttttcaaaaactaacCATAGATTTGAAATCAAACC TTCTTTGTATGAAAGCATACCTAATAAATTCTCAATagtataaaaattta aaaaattgaaccTGAGAATTAATCAAATTATTAATTAAAATTGATCACCC TCAGGGATGGAGCGCACTTTGAAATAAAAGagagttcattctatggtggt cTATCATGGAGTGAGGAtgtctaaaattatttttggtacATTTCCTCCTC AAACCTTCCCCTTTCAAAATACCAAAAGGATTTGTCAACATGCAAGCTTT AAATGATCCAACTAGACTATAAATTTTGAACTTTAGAGGCCTGCCGCACC GCACCTTCCATGACGGACGCGTGGCGTCGACCGTTCCGGCATATAAATAT GAAAGGCAAAATATGGTTTGAAACTGATAATGCCTGAAATAGTAAAAtgc tcaggtaagttatggcatgtccaaaaaactgaaaaattaccataattttt ggagggcattagccggcagaatctgaccaaacaaatgactcattatgaag ggtactatgataaAGTTTCTCAGacgatgtgtaacctaattgtttggcgc tcattttcgcgaaaaacgcAAATATTCCATTATTACATACgtcataattg atgacgtcataaaaattgaaaattgaatttctcgagaATGGTTTATCCAT AATTCACTccaaattttaaacaaagataGGTCTTGGTAAACTCCatcttt taacgaaaaaattttttaaaaattttgatgactttgatgacgtcagcaaa aataagcagaattcgaaaattgcaaatttttgatgaggtcatcaaaattt tgaaaaatttttaacgtTAAAAGATGGAGTTTACCAAGACCTATCTTTGT TTAAATTTTGGAGtgaattggataaaccattctcgagaaattcaattttt atgacgtcatcaattatgacGTAATAATGGAAAATTTgcgtttttcgcga aaataagcgccaaaacaattaggtaacacatCCTCTGAGAAACTttatca tagtacccttcataaTCAGTCATTTAAGTTTGGTCAGATTATGCCGGCTA ATGCCCTCCAAAAATTATGGCAATTTttggacatgccataacttacccga gtgtTATGTTACAATCAATGAATAAGAGTAATAAATGTACAACTATCACT CAAAACTGGTGCTAAGAACCCCACATAACCCAAGATAAAAAACACGGTTC AGCACGGTTCTGCGAAAAGCAgcaaaaaatacctcaaaaaCCCTTCAAAA AGCCCCTTAAAAAGACCTGTTTCTCACTTCCCataacaaaaatcttttaa aaatacaTCATAAAGATGTTCAAATACACTCTAGGtttgaaaaatataac attATAGCACTCGAAATTCATATTTTAGGTAATATCCATTAGAGGTCCTC CAGAACAGCTTTTCCAAACTTTTTAACTACTAAAACTCTTTTATGCAGCT TAGCTACCATCTTTAGGGGATTGTTTACAAAGTGGGGCCCAATATTTGGC TCCAATAAGCCGATTCTGGCGCTAATTGGCCGTtgtaaccattgagtttc aagcccgaagggctagaggtcaatctctaacctttctcaggcaagaaaaa ttgaagccttaaaatatgcgccgtatttttgatgacggattgaatctagc aattcctttgttttcgagtgatatatttttcgaaattaagcggtaaattt tagtctcaatctgtcatttgtgtaaaaaccaggcgggtcgctcaaggccg cgcaactttggtaggatttgttggcttcaaatcctaccaaagagattgat ttctagcccttcgggcttataattCATTGGTTGTAACTACCGAAATCTAT TTTCGACATCGAAAATTCAATTGCAAAAACATTATGTTTTGGCAATCCGA AATCGAATCCGATTaccccgattttcggaaaaagtaACCCGATTCggaaa attcaacctttccttCAACCTTTGCcacaaaaatgaagtttatatctGCA ACATACCCAAAGATATAGCCAATTTAATATGGTAACCAGTTTTGCGTAGA TCTATGGCATCCGCCAGGTAGACTTGCGTAGATCTACGGCATCCGCCAGG TAGACTTGCATAGATCTACGGCATCCGCCGCCTAAAGTTAAAGTTAAATC GGAATTCATAAacattaaaaatggtagactttgTATGGTGTCGCNGTAAT TGTCGACTTATATATCTAAAAATTTCCcccttgttttttcttttgcagaT GGCTACTAACAATGACAGAAAACTTTGGGAAGAACGtgcacaaaaactga aaaggaAGAGAATGGGTCAGGACACAGTGAAGGGTGATAAAGCTGGTGCT GTTGGTTCTCATATTTTAGCCGAGAGAGAAATGACTGTTCAACGTCTTTC TAGTGTTGCTACTGGGAAAGCAAtgaaattcaataaaatggggCCTCAGG AATTCGTGGCCTATCCATTTGATGAATTGACAATCGAAAATTTGATTCAA GCGTGCAGTGCACATTTTCGAGATGAATTGCTTGACAATCAAAGGTGTGA TATTTTGCAATCACAAGATGGTCCTTCTTGTTCTAAACTTTCACACATTA AAAGTTATAAGGTGATTTATGTTCGTTTAATTACAAATGTGAATCAAGCA TCCATTTCCATAAGAAAGTATTTCGATAAGATGAAGATGCCACCTCGCAG CCCTTTATCCTCAATGAACGTTTTAAACTCTTCTGCAGTATCAACACCAA GCAAATCCATTAAGCTTCAAATACCTCAAAAGCAAAAGCCTGTCCAAACT ACTCAATATCCAAAAAGCTTGTCCATCTCAAACATGCTTCAATTTGGAAC AGCAATAACGAAAATGCAAAATCCACCCGTGGAAATTGAGCTCCAAGAAA TTGACGTTTCAGCTATGAAATGGAGCTATCCaacatcaaaaagattttct atcTCGGAGACTCCTCTTACCAAAGGTGGATTTAGGGAAGTGTCTGAAGC CATCGATGTGGacacaaaaaagaaatttgttgtGAAAACCTTCCTTCCAG AAGTTTTCAAAGTAATGGAAGAAGTGAATACTGTTATTCCACTTAATAAA GAAAGTGAGGAGTCTCTATCAAAAAAGGCCATACAAGCCCATGCCCTAGC TAAAAATGTCACCgattcattgaaaaaattatgCTTCAATAATAACTTAA TGGACGATTTTGGGGAGTTTTTTACATATAATAAAGCGTACTTAGGATCA AAGGTGATGCACGgtggagagaaaaaaattgtcatgGTGGAAGAGTACGT TGATGGAGAATTTATTAAATTTATCAACAATGATGGCAAAATCATTCATG GTCAGCCAAAAGATCTGGACCGTTTACTGAAAGCCCAATGTCTTGCCCAC TACTCACTCGTGAAATCTGGGCAAAGGTTTATGATTGTTGACATCCAAGG TTCAGGTTATACACTTTACGATCCTGAAATTGCTACGACTGGTGATGCTA TAGAAAATGAGCGTTTAAACTTTAATCTTGGCAATTTGTCCAAAGCTGCA ATTGATTTGTTTATCATTGCTCATGTTTGCAATAGATTCTGTAAACTTGT TGGGCTGGAGCAACCTCCTTCCTCAAAGATCGACTTGTCAAAATAAACTA CACAACTGTTTGAAGCAATTTCTTACGTTTATATTTTACtcgattttatt tttgttctagGTTATATATTAAAACTTATTGTTTCactatgaaaataata tattaaaataataattcCTATTTACaaatatataaacaaacaaTTCATGC GTAAATCACAAATAATAGTTAAACCCGAGAAAGATAGTAGGGGAGTACAA AGATGAAagacaaaaatgggtgctgggtatgtacgggtcattttttaaac tttaaggATTACAGAAATCAGAACAATTTAAAGTTGTCCCTTCAAGGATT GGAAAATTCATGCTCTTTGAGTTTCTAGAGAAAGATTGGTAGATAGTCTT TCTTAGGAGGAAAATTATCGAAAAtcgaagaacatttttaaaaatgtctc tccaagggtcactttttcactgaAATTAGGTCTTTCTAAGAGTTGTCCCT CCCGCACATACCCGTTATCtccaaacctagtacccccgaGGCCAGCACTC CAAAACGACCTAGACATTTTCTTGGTTTTCTGTGTCGGCGAGAACCAAAA GCTTTTTTGGGGCCCTAGTTaatattttaaaaagctttGTGTATAAATAC TAAAGAATAtagataattttttataatattgTCGAATGAAGTTAATGTGT TTTATTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065152TCONS_00065152Clytia hemisphaericatranscript
TCONS_00065153TCONS_00065153Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065153-proteinTCONS_00065153-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_433supercontigscaffold_433:62979..68136 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.07 0.85 0 0.1 5.3 4.43 2.74 3.11 1.07 2.54 1.42 1.57 0.02 0.1 0.09 0.03 0.46 0.11 0.85 0.92 1.25 1.42 1.53 1.68 0.6 0.69 0 0.13 0.08 0.06