XLOC_040755 (gene) - C. hemisphaerica

Overview
NameXLOC_040755
Unique NameXLOC_040755
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_428:177568..181826+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040755 ID=XLOC_040755|Name=XLOC_040755|organism=Clytia hemisphaerica|type=gene|length=4259bp|location=Sequence derived from alignment at scaffold_428:177568..181826+ (Clytia hemisphaerica)
TTGACGAAGCTCAATACAATAACGTCCTTGGCATGATCGTCAAAGGTGTC
GATGAGGGCGCTTCCCTGTGGTggcaaaaaaatcgaaagagaagGATATT
ACATTCAGCCGACTATCTTTGCTGACGTTACTGACGAAATGACCATAGCT
AAACAAGAGGTAAGGGTAATAGGGCGAGTCAAAGAGAGTTGGGAACGAGG
TATTTTTGTTCAACTGACTGTTTTTGTGGACGTCACTGACGATtttacag
tgaggattggtttatttgattattttcagtggggacagaaattggaagat
aattttccaccggggacgatattttggccaatttttccaatgggaagggT
TCAAGTAATATACAAGATACCTTACAACCTGAGTGATGATTCTCTCTACC
TCTTAGATTTTCGGACCAGTTCTATCCATCTTGAAATTCAAAGATACTAA
CGAAGTAATAAGACGAGCAAATGCAACCAAATTTGGACTAGCTGCAGGAG
TTTTGACCAATGACCTAAAGACAGCGATGAAAGTGATAAACAGAGTGCAA
GCTGGTACAGTATGGTATGATGGATATGATGTTTTTCGTTAATTATTTAC
ATCCCTATCTTCTAATAGTAGGGGACCAagccgtgacatcttttttacga
cctagccatttttagtctattccaaagaacagtatattacaagatatttt
tgagagggaggacgcggattaagcctgggaaaactttttatgaccaaaat
agtgacgccataggcaaaactgcaagatAAAATAAGGGATAGGAAAAtag
ctgatttttaaaaatcaaaataaacaaaaatgattggtaccatctgatag
agcatgaaattctgagcaaaaaaatgtattacaacaactctctgactaaa
acacacaaagaaatacagccgcttgaagttcaaaaacataccgacgtcag
tacaatcaagacaagatttgacgtcaaatcacagtagagctgacagttat
ttttttgtgtgttttatcTACTATAATgtgcttttccagaaaaaacttta
ataggggggggggtaggatacaacatttttttggaaatttaccccctgga
cattgtgacttttgacctcCGGACAGCAGATCTAACCCCAcggacaagca
ttagttgacccccCTGGACACTCAagattaccctcaaacagactAAAATT
ACCCAGAAACAGAGCACGTTTACCCCCGAAACAAGGTAatatttgtagat
ttttcactacccctggacactatatcctccaccccctatgtactaacatt
ttttggaagagcccaattaaCGTTAATAGTGGTCATCTTATAAACGGTGG
AAGCAGTTTTTGTACATTTTCTCCACACTGAACATACTACTTATATATAG
CAATCCTAATTCCAATTATCCCATTTGGCCATGGTATTATAATCAAActg
accgtagtgcagtggtagagcatccggctatgGTTCGCAAGGTTGTAGGT
TCAACCCCccggccgggtcataccaaagattcccaaaatggtacttgatg
cctctctgctagatgctcagcaactaagagaatCAAGGGTAGGGGGAGCA
Atacagggagaaagagtggcgccctcccctaccttcgggtagatagctat
cgaaagaggagctttCGGGTCGCCTCCAACTGTGGTCGCAGACTTATTTA
CTACCTATAATCAAACAAATACAGTTCATCGCAAAAACTTTGTGAGAGAC
AACTTGTAAAAATGTATTGCCTCGACCTGATAAATCTTACTATTGCCAGC
TTCAAGAAAATACTAGCAATATATCGTCAATATATTGCCAATATATTGAG
GCAATATGTtgcgtagtgtatgtagccctttacaAACTTATCATCAAGAC
GAAACTTTTTGTTTTAGGGTGAACTGCTACAATATCCTTTTCCCCACCGC
TCCTTTCGGAGGTTACAAGCAGTCTGGTTTTGGAAGAGAGGTGTAAGTGA
AACATTCAACTTtcaattatgaaatatttttaggcttacaatGTGACCTA
TAAAAGTGTAAAGGTTTATCTATGTCatagatttgaaaaatgaaaaccgA
AAAGCACTTGAACAAACACATACTGTCCCCTTTTTCAGTCACTTTGAATT
TCCACTTCAGGAAGAATGTGACCATGTTTTTGCTTCAATACCTATAAAAA
TAACATATCAATTCGAAAAATTCAGCAAGTAAGGAAAAAATTTCCCTATC
AACAATTACGACCTGTATATTAACCTGTATCATGATAGTCGGACGCCAAT
AAGTTAATACCTTAAACTGAACATGTTGCATAATGTATCTTTGCTGAATA
CAATTTAATagaattttttattaatttttatactgaaacacccgaaaaat
acCGGGCGTGTGCCACCAGTTtagaatttaaaacaatgaaactggTGACA
AACTCTCGGTGtttttcgggtgcttccgtatataaaagattacgtcatga
atatcaagaatttttcaaactctttttCTCAGTGGTGAAGCATCGTTGAA
AGAATACACTGTCACCAAGTCGGTAAGATAGCTTGTCTAAAGTTCTTGAA
TTTGTTCTTGAAGTCGGTTTCTACAATTATGAACCTGTTTTCTTACGTTA
GGCTCTTtcagaaaatgattgaatatggGAAGGATAGAGGGTATAacgtt
tttttgaaatttattctcCAAACATTTATGGCTTttgacacccccccccc
ccccNNNNNNNNNNNNNccccccaaacagagcaagtttacccccggacaa
gccaaattttttagttttttcactACACCCCCCTGGACATTTATATCCTT
CACCCCAATGCATGGACATTTATTGGAAGAGCCCCTTACAAAACCGATGC
AGAATAGTAATTTTTACCAGAAATGTAGACCAATCTTTCCATTCTTATAG
aacttttttattcttcaaaaCGTTCTGAAAATGGTCGCCATTACCTAACT
TTATACTTTAGTAgctgtacaaactttcgcgagcagaaacttgcgaattt
tagcccttttttacgaaagtaaatgtctttgaaaattcttgagagGGTAa
ttttatgctcgcgaaaaataatCTGTAAAGAACATTTACTCAAAATTTTC
CTCTTTGGTGATAACAAGGATAAAATTTAGTGTAGATATTGTGCAAAAGT
CCATCAATTGTGGTTTGAATACATTTAAACGATCAAAACGATAGTTTTAT
GCACCGAAAACTTAAACATTCTACTAGAAATATTCCTCAtgcgcgaaagt
ttatgctcacgaagaattattttttgtcgaatttgcgaaagtaaatttCG
TAGATTTCGCGATTTTATGGACCTCGTGAataaagtttctgctcgcgaaa
ttTTGTACGCCTCAAGTAGTCGGTAAATCAAACCATCACGCTCTTTTGTT
TCGATGAAGcattttaaaaattgcaatttcaGTCTGGatgaaacctaaaa
atgtttttagtgTAATGGCCTCTGAAATATGGTGGTCGATGTCAGAGTTA
CAGGTTGTCATGAACATTTTTGCTTAATTGCTTATATCGAGAGTTATCAG
CTTTATGACTAACAGTGTTTAAGAGGGCTATATACATATTTCGTTATTTA
CGTTACGTCCACATATTTCGTTATACTTCTAGAATTTGTNGCAATTTCAG
TCTGGatgaaacctaaaaatgtttttagtgTAATGGCCTCTGAAATATGG
TGGTCGATGTCAGAGTTACAGGTTGTCATGAACATTTTTGCTTAATTGCT
TCTATCGTTATATCGAGAGTTATCAGCTTTATGACTAACAGTGTCTAAGA
GGGCTTCTACCTTACTATTCCTAGTAGGAATTCCGCCGCCCACAACCTCA
ACCTGGTTAATTTGTCCGCCTTTAAGTTTTGATTCCTCTTtgtttttacg
aagaaagataGATTATACATTATACATGCGTGttattaatgcaggaattg
tcaTCCGTGTTCAGTGTTAAATCGTGTCTTAATTGTTGTTCTATTTCAGG
TTGTCATGAACATTGCATAATTGTTTCGACCCAATATAACCTCGATTGGC
TGACTGAAGAAGAAGGTTTTTACTTTAAAATGCAATTTGAATGCTCTCAG
ACGTCCTACATTATTGGCTGGCAGCCCTGGCATTGGATCTTGTTCATGTG
ATTCATTATTCACGATTTTGCATGTTTGTTTTGTTCCATCATGATACACT
TGTAAATAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064999TCONS_00064999Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064999-proteinTCONS_00064999-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_428supercontigscaffold_428:177568..181826 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.13	2.4	1.11	1.54	4.31	3.23	3.48	3.45	2.49	3.34	3.32	2.29	25.61	43.24	13.07	9.79	4	11.28	1.57	2.1	1.82	3.59	3.01	3.07	3.43	3.69	2.36	0.84	3.91	3.43