XLOC_040673 (gene) - C. hemisphaerica

Overview
NameXLOC_040673
Unique NameXLOC_040673
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_425:227405..231238+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040673 ID=XLOC_040673|Name=XLOC_040673|organism=Clytia hemisphaerica|type=gene|length=3834bp|location=Sequence derived from alignment at scaffold_425:227405..231238+ (Clytia hemisphaerica)
GGGgttcaacaaaatcaaacatGCATGCAGTACAAAACATTTGTGAAGTG
CTTTACGTAAATGATCAAAGATGCGTATAAAAGTTATAGGGTGTTGGGTT
GAATTTCTCTGGTGCGGGAAAAGTAGCCAAAAGCAAGTTTCTTATCAAGT
TGTTTTAATTTGCTTTGCGTGTTTATTGGCTGGTTTTAGCGTTGcgttat
ttttcaacctaaccACAATACCCGATCTAGATGGCAACTGCGGCGATGCG
TAGCTACCGGCGAATGTGGAATTAGAGCGATTAAACTGATTTCGTTTAGT
TTTGAAGTGCCTTTCGATAGGCAGAATATGCGGCGTGGTATGAAGATGTT
TCCATTCGTATCAAGTAGTGAAAAGAAATGCAAAAAAGTAGCTGATGAGC
TTACACGTGTGAATCAATATAGTCGTGGAATTGCTGAATTGGCAGCTCTG
CATTGTTTGGATACGGCAGATGCTGCTGATGGAAATTGTGGTCGATGAAA
TAGCTGAAAAgtaagttgaaaaatatttcttttgtttcgcTATGTTTGAA
GATTGAGCCAATAGTCGGGTAGAAATACTGACTTAGAATTCCGACAAAGT
GCCGCTGGAGAAAAGCGGACCCTGTTAGAAACCAATATTTAGCAAAAATT
GGACCCTGTTAAACAAACGATCGATGAAATATGGAGCTTGTAAGTCGAAA
TTTGGACCTTGCCAGATgcaaattttcctaaaaaccaTCCTGACCAGCGA
CATGTCCGCGTACCCAAATCGCATGCGTGACCCCCAACCCGGGGCTAATA
GCTGCCAAAGAATGTCTAGCTTTTCCAACTTTCCAAGAATATGACAAAGT
TAATTGATTCttattttctataaattttatGTTATCTCTTCGAATGAAAA
CTTCAGAACTCATttcttttagattttcaaaaggCTAAAATAAATATGTA
TGGGGGTATTATAGCGAACGTAAtctgatttcaaaaatattagtAAGCTT
CAAGCTATGTAGACAAGCGAGATTCAAGTAATTTGAGAAAAACAATCGAT
TTTTGGTCATCATAAAATTCTATTTACTTacttatattttcaaaaaatat
catgACTTTTTAACGTTTGAAATTAGATGCTGTGAAAATGTATCAAATTT
TTGTAGAAGGACAATAGCTTTTGAGAGTAATCACTGTTGCGTGCCTAGGC
TAGTTCTCAAGTAGAATATTTTCAATGACTGGAAAAAGTCTTCATAGAAA
ATTTGGACCaagaaatgaaataaacaaaattttttaaacttaaatCGCTT
CGGAAATTTAGAAGGATTTCAACggtaattattttttatttttttagtta
aaaGTCTTTTAACGGTTTAAGAGATATGAATTAGTGAATAGTTAAAcatt
aaaatatatttcgaGTATAAGGTCTTTGATGGAAAAAAAGCTGAATAAAT
TTCCATTTTGACGGAATTTTATTCAagataaacacgtaaaaagaaaattt
gtttaatCTAAAGGACGTAGACAAACGAGGTTTTTCTGAAATAATGTAAA
TATTCCAgccctttaaaaatatttatcggTTAGTTAGTTCCTTCTTTACA
AAAACAACAGTAACTACTGTAGTATTGATACCATTAATACGTACGTATCA
TCTTtaagcataatttttttttcgtcgtcattGGGATAAAATGTCGAAGG
GAAGATTAatccttttttaaagattatcaaAGAAGAGGATGTATGattat
caaagaaaatttgaaaccGAAGTTATTTTTCATATCATACATCGTCACTT
TAGACAGTCATACTAAAACTCCAAAGAGATTCGTCTCGTCGTGAAATACC
TCATCTCACTCAATCACtaataacaaaaacaaagtgtaagatttcaaaaa
agggACACTTTCGTCATCACTCATGGGAACTTTGCGGGGcgaatcaaaac
atttgagGTATTTTGAGAGGATTCTTCAAAAATGTATGTACTATAatcta
tttttaagattttcgagTGTGTAGGGTTTGTTTTGTATCTTTTAAGCGta
tattatttcaaaattgcGATTGCAAAACTTACCAACAAAATTTAAATCAG
CTCttccaaaaaacaaaagttatgctcaatacTTCTTCCATTTCTTGCAG
AATGAAGGACGCTAACGATGGTCTTAGATTGGAAGGCAGCGAAGACCTTG
GTTACCATCTTTCTAGTTGGGATTATAGGTAAGATCTATATCTTACGATA
TACATACTTTTCAATAtgaacaattttatgagaacaGGAGGCTCCACTTT
TGGCAAAAGCTAAGAACAATTCAGAAACAATTCCAAAAAAtgattgattc
agattgattgaTGATTCAGCAATTactaaaaaatgctgatttcaaaCCCC
TTTTAAGCCAATTAGTAAAGTTAGCACAATAAGAAGTACAATGGCACCTC
TGATTAGTTGTTCACCATTTAAGAAGTTTTTAATTTCGGGCCCAAATCTC
GGAATTAaaccacaaaacaaaaacaccCGCCTCTGCAagaattttctatt
tcttataaaaaaaacaagtttccCTTTAGCTCTGTCTCcaaataaatctt
caaaatctcTTTTCAGCTGCAAGCTTTCCCAATCCAATAGTTCAACAAGC
TGAGGTACAAGTTCATGTACATGAAACTTTGtatttgaatatttctttgC
AAAATCTGACAACTGGCGACACAATAgtaatatttgaaattttggctggT
AAGGAAATCATCAATAATATTGATAAGGATACAGGTAATCCAGAAGAACT
AAAAAGGGTGTATCCTAAGCCAGATAATGTTTTCGGTGATCGCTTGGAAA
TCATATTTTCACCAGAAGAGCAACGTGTAACTGTCATCATAAAGGATATG
CAATACCAACAGGATGGAATGAAAATCGTGTCAGTTTTAGTCAATCGACG
AAAACAAGGGGGTTTCAAGACAGCTCAGAGTGCCACCAACATATCAGTTA
TTAGTAAGAATGAATTCTTTCATTATCATttatcaaataataaagtatGA
CTACTCATTTTCGGCGGATATAAACATCTAAAAGTCTATTTCGAAAATAT
TGGCAGTCCGCACATTTTGATATGTGCTCTCGAAGGAGAAACGATATTAA
AAGtaacattttgatgaaaagatAATCTTAAACGGACAATTTTAAGACTT
GAAAATCTTTTAGCCTACTTTGAAGGGTGTggaatgtgattttttttttt
ggaccagaCTTTATCAGGATACGAGGTTAACGATTGGCTTCGGAAACCAA
GGTTCAAATCTTTAAGAGTACGGTGTTTAGGTCACATAAAGCTATATAAT
AGTTAtcagacagttgcgagtacaatacaagaaatattttgcgAGTTCCG
AGATTATTTTGCATATTATTCACAAAAaatcggaacgagtaaaatatttc
tgtATTGTACACGAGCTTGCGTCCGATAACTGGTTTATCAGTGAAccaga
aaatgcactttttgtactctttttaccaatcagattgctgatattttttg
gatcactGATAAAAGGGAGATACCATCTAGTATTTTGAAAGATTGTATTG
CATATGTATTTCTCTCTCCAATACTATTTAAGGTGAACCAAATGCAAACT
CATCACCATTAGCAATGAACAATACGCAATATCAAATCGATGCTGGTGAA
ACTTTGAATCTGACTTTGATCATGAGTGGCAACCCTCAACCTAACGTGAC
ATTTAAGCTTGAAGATGAGCAGCTCAATGTTTTGGTAACAgagatttcaa
aattaaatcgCACGTATAAGTATGAAGTACTAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064846TCONS_00064846Clytia hemisphaericatranscript
TCONS_00064847TCONS_00064847Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064846-proteinTCONS_00064846-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_425supercontigscaffold_425:227405..231238 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.06	0	0.04	0.2	0.25	0.08	0.31	0.88	0.25	0.64	0.55	0.17	1.54	1.39	1.94	2.17	1.7	1.78	0.26	0.8	1.62	1.29	3.51	2.93	7.84	6.01	0.21	0.62	5.49	4.42