XLOC_040586 (gene) - C. hemisphaerica

Overview
NameXLOC_040586
Unique NameXLOC_040586
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_421:109373..112872-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040586 ID=XLOC_040586|Name=XLOC_040586|organism=Clytia hemisphaerica|type=gene|length=3500bp|location=Sequence derived from alignment at scaffold_421:109373..112872- (Clytia hemisphaerica)
ATTTGATTCAAATAAATCTGGTTCTCATAGGTTATATGGACTGGTCAATA ATAATCAAAAACTTGATATGAAAAATGGCACATTTTTGCCACTTTATATT TTACTTATCTCCCTAATATTTCACCGTGGGGACACACAGACAGTAAGTAT CACACGTCAAGATAATGGAGGTGATGTCTTTCAAGGAATAACAGACTGTT CAAAATATGATGGAGAATATTTAAGAGATAATGAATGTGTTTGTAAAAGA TTGAATACGCCTGGCACATTTTTTACTGGATGTTTGTATGGAGATGATGT AGCAAGCAAGACAGGTATCTTTTAAAGGGATAATCAGATGGTTTGTAATA TTTGGCATGTGGGATCCTTCTATTGTCCTGAGCAAAATCTCAAAATATTG TGGCCTAAATATTTTCCAAAGTCGAGATATTTAAGTTACAAGTTTTTGGC TTTTAGGATGAAAACAATAGAATTTCAACGTAAAAACCGTGTAAGAACTC ATCTTTAAAAATATCAAATTTTGATATCTCGATTTTGGAAGATTGTTTCG CAAAAATACTTTGAGGTTTTACTAAGGACCACGGAAGGTTTCTATAATCT AAATATCCCAATATCTTATTTTTCCTTTAACTTTTTTTTCTACCTGTCTT TTCATCTGTCTAAAAAGATTTTGGGCGAGGTTTGGACATTCAGAGAGGTA CTTCCAGTGGTTTGCGTGATGGTACTGTCCTGACTGAACTTTCGGGGAAA CATGATACAGGGTTGACACAGGGGTTGTTTTTCACCAGGATCAATTTCTT TTCACTTTGCCTGGAGATATCCATGTTATGTTCTCCCCTTTTCAATGTAT ATATCAAGTTATAAAATCATTGGACGGGTTCCTATCTAGGTGATAACTGA TGCAAACACTGCATGTTACCTACGATGTCGGTCAAAATATATTGAGAATT TTAGTTGATTCCTCGTTTTTAGCATTTTAAAGTTTGGGCGAAGAAGTGGC TTTAGGGCTATTTGTTATTTAATCGAATATTTCAATTTGGGTGGTGGGCT TTATAGACTTCCAGGCCATATTCTGAGCCCTTTTGGACCGTTCTTGAACT TTTGGATCCTGAGATCCTAAGGTCCTAAGTCTCATGTTAAAACTAAGAGT TAAAACTACACATCGTTTGTGGTTTTGAAAATTCGTGGGAATTTCCCTTT TTTTCTAAAACATTGCGACCATGATTGTATGAAAGTTCTGTTCTGTTCAT ATTTAGGTTGTCCTTTGAAGCTTCTTGGTAGCTCCTCCGTCACATATCTT TCTCATCATGACGATCTTTTGCGAAAGAGTATACAATACACAGACAACAC ACCACTCAATACTTGTACGAAACTCGAGATCCTTATGGTTGATCAATGGT CAAATGNACACCACTCAATACTTGTACGAAACTCGAGATCCTTAAGGTTG ATCAATGGTCAAATGTAGATTTTTGGCAACCTTCTGGAACGCCAGGACTT ATTGGAACACTTAAAGTTGACAACGGATTTCAGTTAACGGTCAGTATCTA CCAAATTTGTCCCTGGAGTATAATAAGCGCAATTCCATCGAGTTTCTGGT AGCTATTATCAACTTTTTTATGCTTACTGATAGCGCCAAATAATATTCTC TGGGTCAATCAGTAACTTAAATAAAGCCTGGGATACACGGGGACGAGGTT GTTGTTTTTTCAAACGAGTTCTTAAAGACTACTGGTTCGCCAGTCCAATG GGATGGAATCACGTGGGAGTTGGGTAAGTGCATGAAGAAAAAAGTTGTCA GCGGGAGGAGCTGAAAATTAATCAGCAATCTTATACTAACTCTTTTTCTT CCTCCTATACAGATCCTTAGCAAACGCCCGCCACCTACGTTTCCACCCTC CAATATTATATAGTTTTATAATTTAATGAATTCATGATACTCATGACGTA ATGTTTTCTACGGAAAGACCCCGGTTTTTGCAAGTAGTGGCAAAATTTTA TACAACTTTTGTCTAGTTTAAATTTGCCACTACTGGCTGAAACCGGGGTA TTTCCGTAGAAAACATTACGTCATGAATATCATGATTATAAAACTCCTTT CCATTTACAGTGGATACTTACTCCAGACCAAGCAGTATGGGAGAATTTGA AAGGGCGTGTTTTACGAATTTCAATGAAATGTACGTTAGTTGAACAAAAC AATGATGTTTCGATCAGAAATCTTTGTCTACCAATCAAAGTTACCGGAAC ACGAGGTTTGTGAAAACTGTTCTCACTCAAGACCATGTTTAGAAGTTACG GTTTTGTTTCACTCCGTATAAATGTTTGTAACGGACAGGAAGCGTTCATA CTGATTTCGGAACGAAATCAATAAATCGAAAAATTTCGGAAATAGGTGGG TTCCGCTCCGATGAAAATAGTGGAGCAAAACCATTTTGACCTGTTCTTCT TTGTGGCATCTTTTTTTTGACGTTTCGAATATTGACCAAACAAAAGACAA GTTGCAATTTGCATACTTTTTGATCACGTTACCAAAGTCTCCTCTTGGGA TTGGCCTATTTTTTATGATCAAAAAGTTTGCAAAATAAAGCGATTTTGGT ACGTAAGCTCCATCTTTTAACAATAAAAAGAGGCAAAAGCCTTCCAGACC AGTGTTTTTATAATGACTACGTATTGACGTTCACACAGTGTTTGGGGACG TTTCGTTTCGGAGTGATACAAAACCGTAACGTCTGAACATGGTCTAAGGG TCTAAGTCCTTGGCAAATATTGATGCGCTTTCTTTCTGCTACATTTGCTT TCTGAGTTTGAAGCCTGCAAATTTGGACAACACTTGAAATCACTCAAAAG CAATAAAACATATATATATATAAGCTTTCACATATCAGTTCGGTAAGACA TTTGACACTCTCTAATTGGATTATCATTGGGGATTTTCCATCGAATCAGG GAGCTTTCGAATAGTAGAAATTCGTTTATGTGTGTTTCATGTAAAGGATG GCTTTCAATGTTATCGAATAATGGTGCATATCGAATAGTAGAACGTCGAA TTAGAGAGCTCTATTGTCAAAACTTTGTTAACTCTATACCTAACTTACTT CAGTTTACGCAACTCCTCTATCTCCGAATTTTCCAACGACAACAACAACA ACAACAACCACAACGACTACCACAACCACACCGACTACCACAACCACACC CACAACAACTCCTTTGACTACTACTACAATAAAATCTACTCAAGAGACCA CGGCTCCTATAACGACTGCGCCACCAATAGAACCAGTCACCACGACACAG AAAACAACACTTGTAACCATACCTGTCCAAACTGGCGACCCAACAACCAA AGACCCTACGATCCCACAAACAACATCCTCTATAAAGGTAACAACAACAC CTTCAGGGACGGAAGACCCTCCCACAACTTTGCAACCAGATCTCACCACA TCTCAAACTACTACTGCTGAAAGCAAAAACGAAACGACTCTTGGAGCTCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064703TCONS_00064703Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064703-proteinTCONS_00064703-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_421supercontigscaffold_421:109373..112872 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04 0 0.09 0.04 0.05 0.08 0.39 0.23 0.16 0.2 0.04 0.05 9.82 9.22 0.06 0 0.09 0.12 14.92 13.62 0.04 0.05 0.13 0.16 1.11 1.06 0 0 0 0.04