XLOC_040549 (gene) - C. hemisphaerica

Overview
NameXLOC_040549
Unique NameXLOC_040549
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_420:48275..52429+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040549 ID=XLOC_040549|Name=XLOC_040549|organism=Clytia hemisphaerica|type=gene|length=4155bp|location=Sequence derived from alignment at scaffold_420:48275..52429+ (Clytia hemisphaerica)
tcttaaaatgtaaaaatttaatcaattaattaaaatttagaaAGAGTGAT
GTTAATGttatcaaataatttaatcACCAAAAAATTCCGTTACATTGAGC
TCGAATCGTTTCAACTTTTATTCATATAaattttaatagaaaaaaagcAA
GCAATATTTCGCTCTTTTTCAGAtcttttttattgacttctttTCAGACT
AGTTGCAAGTTCTCCTGGTAAATAGACTCAATTAAGTAAATTAAGATTTG
AtatcctttttcaaatttagataaAATAGGATTACCTGGTAGAGATGTAG
ATTAATATGACGCCAATTCACCAGCTCTTCTTGAAGCTTACCTTTTACGT
TGTTGCTGTACAAAAGAATTTTCGATGAAGTTTGCCCCTGCTGCAGCTGC
AGCTGCATGTTCTCCTGGTAAATAGACATAAGTAAAAAGAAGTGATTAGT
GGCGGAGCATTTTCCAACCACAATATTATGCTCATGGTTGACATGTGGTA
TCACGGGAGGTTTCTTGGGAGGCATTGCTAGTCTCTGTTTTCTTTGAGTT
CTTATTGGGACGAGGGCAGGGTTTCTTGCCTGCTGTGGGGGCCGAACCTC
TCGTACTGGCGCTTAGAGTGGTCGTTGAAATGCATGTTGCGGACTTGAAG
AGCGGATCATTGGCACGGCTAAGGTTAATCTTTTTTCTGTATTAAATAAT
TCTCTCATTAATCGTAAGATAAGTAAGCTAAATGAAAAGTGGTGATTTGC
AAAGAAAGGCAAATTTGATATTGTTATCTTACCCTGGTACAAGTAACGAT
GAGGCTGAGCCCCATTCCGACAGGGTACCGACAGACCCTTAAAACCTGTC
TCATGAAATATAAATGCTACGGCCTTAAAATTTTTAGGGTGCGTTCAGAA
AGGGTATAGGGTCATGAAATATGCAAAATCCCGAAATcgataaatttttc
acaaaatctcaaaacttcatgtgactcccactTTAATTCCAACTCGAAAA
TCccttattgaaaatgaaaattcgagctAGAAGCGAGTGGcgtcataatt
tgcacttttattACGTCATAACTTAGTTAACTCGAATATTTCTAACTCTA
AAATTGCTAATTCGAAGATTCTGGGCCTCCATTTAATATTTAATTGCACA
ATGggttttttctcatttgagtGTTTTGCAACTAAAGAGTATACAAAGGA
CGAATTTGAAAAAGGACCAATTCAGACATCCACGTCTTACATGATAAAAA
AGTACTTGTTGAGATTTTACAGAGCAGACAGATTGTAAATTTGACTGAAA
TTGCAAATCGGCCGTTTGAATTGTTCGATTTGGATAACGTTTGTTCATAA
AATCTGATTTATCCAACAAACGAGACTAGTGTTTTCGATTCACCGACCGT
AAGTCTAGATGGAACCTTTCGCAATAACTGaagatttcggattatttttt
caaatttaaataaaattgatgtGGCACTGGTCCTGCCATTGCGCCAGCTC
CTCTTACAGCTACATGATTTCCTGAAGAAGTGGTTAGTGGCGTAGCATTT
TTCAATTGGAATATATAGGTCACGATGAAATCCCACAAGATGCACATGCT
ATGTTTATTTCAACCTTATCAAATGAAAGTAATTCAACATAACTAACGTC
CTTCAACAATCTGATACAAATGATGATTTATGTGGCATTGATCCTGCCAA
TTCTGCAGCTCTTCTTGCAGTTGCAAGTTCTCCTGGTAAATAAACATAAT
TAAGTAAACTGTAACTGTACTCTTGTTTCTCGctgccatttttatttttc
aaactacAGATTTTCAGCGGGAAGTTTTGAACCAATTTTatcatgataaa
caaatttatttttaatcttttttatctTGGAGATATAAAAGAATAAatca
atttatttcaaattcacAAACAGTGATAAATGTAAGATAAAGATGCAATA
TAAATTCTTTGCAGGCCCAATCAAATGAGCTAACTCAAGGTTGTTTCGGT
GGTCTGCCATTATTATTTGTCTTGTTTCTGTCAACAAATCGAAAAAGGAC
CAATTCAAAACACCCACTTCTCACATAATAAAAAAGTACCTGTTGGGATT
TTACAGAGCAGAGTGTAAATTCGACTACATAGTTACGAATCGGACGCTTG
AATTGTTTGATTTGGATAaagtttgttcaaaaaatctgaTTTATCAACGG
GCTGGTGGTTGTCTCATTACTGGGAAACGGGAAGGTGGCTGTTCAACTGT
GAAAAAAGTCATCGAAAGTGTTTCTTTNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNcaacttatcaagttttaattgctagcaaactcgta
aaaaagtttgataacctaacgaggagtgttttctatgagttcttaatcca
cctattctaatccgttgcttCAACAATCTGATACAAATGATGATTTATGT
GGCATTGATCCTGCCAATTCTGCAGCTCTTCTTGCAGTTGCAAGTTCTCC
TGGTAAATATTAAACATAATTAAGTAAACTGTAAGATTTGggattctttt
tttcaaatttaaatgaAATGGGATTTTTACCTGGTATAGGTGAAGGTTAA
TATGGCACTTATCCTGCCAATCCTGTAGCTCCTCTTGCAGTTGCAAGTTC
TCCTGGTAAATAAAATGAGATTTTTACTACCTCGTACAAATGAAGATTTA
TATGGCATTGATTAGCCAATTCTGCAGCTCTTCTTGCAGCTGCATGCTGT
TCTGGCAAACAAACATAATTAAGCAAAAGGAAGTGGTTAGTCCTGCagca
tttttcaatttcaatataTAGGCTTATATAATTAAGGGGGGCTCCGAGAA
AGATGAACTGATTGAGGTTTTTCTGGATGGCtggacatttttgtgaaaag
ttaCGTAAGAAACAGTCAAAAAGGGTCTTAAAGTTATTTTAACGGAAAGT
TTTTGTACGCTTATACTGAATTTCAGTCACTGCTCTTTGTTTAGGGTGTA
CAGCTATTTCTACAGGAGAAGAATAAAACCCTTAATCAGCAAGTGTaatg
aaaagagaaaattttgtcTAATAGTGCCAGATCTAAATAATTTTAATTTG
CTGCCATGTTGTGAACTACTTTGACGTTTTAGTATGTCACCTTTTGTGTT
GTTTCGGTTTCATAACAAtaccttttttctttcactGGGCTATTAGAATT
CTTGAATTTAAAACGGTTATTTCTGGAATTATTTTTCCATCAGAAAATCT
TTAGTGGAGAGCAAAAATCTTCTTGCTGGGAAAGAACTCCTTactttttt
tgaacattttcagcTTAATGACGGCGGTATAAAATTGTCTTTGTCCCATT
CGCTCAGCAACCTAAGAAAGTTTCATAAGAAACTAATCATAAAAAcgtaa
caaaataaaagaatttgtttTAAGTTTATGCAATAATTATTTTAATGATC
GAACTCACATCCCGATCGGCGGTTAATTGTTGGATTTGGGTTTGAGCCTG
CATAAGTTGACCTCGGAGTTGATTGATCAACAACTGAAACAATACAAGAT
AAAGGCAAAAGTGAAATGAATACGAACTTAATTGATGTATAACTAGCAAG
AACAAAACAGTATAGATGCCTTGCAGGAACAAATAGAgctataaaagaaa
tcaaaaatcaaaaagaaatcaaaaagaaatcagaaataaaaaagaaataa
aaaagaaataaaaaataataaaaaaatctaaaaaaaaacaaaaaaaaaat
caaaaaaaaaatcaaaaatcaaaaagaaatcaaaaatcaaaaagaaatca
aaaagaaatcaaaaagaaatcagaaatcagaaatcaaaaagaaatcagaa
atcaaaaagaaatcagaaatcaaaagaaaatcaaaaagaaatcaaaaaga
aatcaaaaatcaaaaagaaatcaaaatgaaatcagaaatcaaaaagaaat
ctaaaagaaatcaaaatgaaaatcaaaaaaaaatcaaaaatcaaaatcaa
aaatcaaaaacaaaatcaaaaatcaaaaagaaatcaaaaataaatcagaa
atcaaaaataaatcagaaatcaaaaaaaaaatagaaaatcaaaaagaaat
caaac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064641TCONS_00064641Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_420supercontigscaffold_420:48275..52429 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.44	1.13	0.48	0.53	0.96	0.7	0.8	1.31	0.19	0.24	0.32	0.21	0.22	0.22	0.21	0.11	0.06	0.1	0.11	0.19	0.3	0.5	1.12	0.98	1.16	1.17	0.61	0.56	0.91	1.26