XLOC_040492 (gene) - C. hemisphaerica

Overview
NameXLOC_040492
Unique NameXLOC_040492
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_419:272288..280853-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040492 ID=XLOC_040492|Name=XLOC_040492|organism=Clytia hemisphaerica|type=gene|length=8566bp|location=Sequence derived from alignment at scaffold_419:272288..280853- (Clytia hemisphaerica)
GTAAATGAAGAATAGAATTTATTCGCTATCAATATTCCATTGGATATCGA TTTGCTGAAGATGAAAAGTTTAATTTTATCACTTGTGCTGTTCAATATAT TCACCAAAGTCGTTAGTCAAGGTAAACATATTACTCTTTTTAAAACTATA TACTAAACTTAATATCTACAGTATGCAAATCTTTTCCAAGATTCTTTAAA ACACCACTGTCTCGCAGCCCCGGTGAAACTTTTTCTTACAGCGAGGGTAA AAACTTCGATTGAAATCTCAATGGGGATGAAAATACTATTGTTACAAGGC TAAAAAATTTATTGGAATGGTTTTGGAATGCAATTTCTAAACAGTGAATT TCGAATGGGGATGAAATCATTGTCAATCTCTTAGTGGGGCTGAAATTTTA GGGTNAACAGTGAATTTCGAATGGGGATGAAATCATTGTCAATCTCTTAG TAGGGCTGAAATTCTAGGGTATTTTTCCCATCGGGGACGAAATTTCCAGC GGGTCTGTGACACATGTGCCAAAATATTCTAAAACCTACCAAGATGCTAA AAAATGCTTCAATTCGAACATATTACATGCCGTTGAAAAGATAATTCAGA GCACTAAGAAAAGTGGTTCAAAAGATTTTAGAATATAAACATAAAAATGA AGAAGAAAATACTGAACTCTTGATTCTTTGGTGCTAGAAACTGTACAGTA TACCAAAAATGAAGCTAGTAGAATAAACGAATTCAAGATAAATTTTTTCT CAATCGTTTTCATCTCAACAATCATTGTGTTCTAGATGATCTTTTCAACG CTATATATTTCGTTAGACTTGAAGAATTGCTCGAGGAATTGCTTTTAAAA TGGCAGGTCAGACAAGATTTAGTGCACGCTCGTTAGTTATTAGTCCAGCT GTCGCACGTTGGTAAGAATATTATGGAACTCTTTTAAAATATATTTGATT CTCACCTTAGCTTTGACTAAAGAATGGGCTACTCCGAAATTGGCATGTAT ATATGGACACAATGCAAAAATATATTTCAATGTTCGAAATTTGAGAAAAT GTCAACTCAAGTGTGAAGCTCTGTCATATTGTAAATCCATTGAATATAAC AGAAGAATACGACGGTGTCAATTATCCAGAGAGACATCCTTGACATCCAA AAAATCATACAAGGTTCCATGTCACTATGATCCTAAGAATTATTATTTTA CTGAGATAAAGCCGAAAGGTAAGAAGTTTTGATCTTCATTATACTCTGTA CTGTAAGGTCCCGAATAAACGTCCCCATCTGGTTATTAATTTTTGAAAGA TTTTCGCACCCCTGTTCTTATTAGGAGCCCCTAATAAGAGGTACAATTTC GGACCCCCTCTTTTTTGTCAGATTTTGAAGAAATTTCGGACCCTCTCCTT TTTATTTGGATACTATTACCCACAAACGAATTTATATTAATTTAAATCAA CCAAAAGAAGCATCCGGGAATTCATATTATGAGATGACTGTGTTGAACAA AATATTTTGTCGTCAGCGGAAATCAGCTAAATTTGAAATTATGCAATAAA ATTCTTACCGCAGTAAATTTTGAAAGTTTTTTTTCTAAATATTCCTTTTA TACCCTGAGTACCAGAGGTTGAGATAAATGATTTCGACCTGTGCTTTTCA CGGTATTCCTTTTAATGTTATTTCTTTCTTTAGCTTTAACTAAGGAATGG ACGAAAAGAATATTCGCGTGCATTTACCATCATAATGACAAAGAAATCCA AAACATTCGATCTTTTGAAGACTGTCAACATAAATGCGAAGCTGCTAAAT ATTGTAATTCCATTGAATACAACAAGAAAACTCGTAAATGTCTTTTGACA AGAGAAACTTCTTCAACTGTAGCAAAGGGCGATTACCACAAACCTTGTTA TCACGACTCAAAGAATTATTTATACGCTGAAATAAAGCCAAAAGGTAAGT ACAATCTTTTGCTGATCCCATTTATTCTAAAAGCGAGTAATTCAGTCCCG AAAATTTTCAACGGATCGGTATGGTTCGGAACGGTTTCAAGGATGATCTT TAACCCATTTACCACATATTTATCTCAAGTCAACGGTTCGAACTCTCTTT GTATTGGTATTGTAAACAAAAAGAATTTGGCTCAAAAAATTGGGGAAGCA GATTTCGCAAAACTGTTTGGATTGGTTATTCAAAATTTTCAGATTTAAAC CGATCCGTTTAAAACTTGCAATATGGAAAATTCCTTGGGGCAATTTGGGA ATAATCACGAATTTATTTCTGACAAAATCGTGAATAAGTAAACATTATTT TACTGGCGCTCTAGTAAAACAAACGTGAATAAAAATGTTCAATAAACTTT AAGTTCGGCAAAGCAGATACGTGATTCATTTAATTTTCAACAAAAAATGT TCTTTATGATTGCTGTTCCTTTTATTCACTCAAATGCGTCCATAATAATC ATCGCGAATACACCACTTTCTTGTAATTGAATTCAAAATTGTTGGTCGAG CATCGGGACTTTCATTAGCATGTCACTGTCCATGTGTCCGTGGTGCTACA TGACCGTTTTTGAAAGAGTAGTGATCTCTCAATTCAAGTTTATTTCAAAG AAACGGCGGCTTTTAACAGGGAAGGGGCTTCCGAAAGACCGGTATTGAAC CATTTTCCTTCTGTTATGCCAGTATCTTATTCCCAGGCCTGTTAGACAAC TAGCATGGTCCTTCCAAATTCGAGATATCATATTCGTCAGATTGTTTTTT TTCACCCACCCCTTTAGAGCTTCAGCGTGGTGGACAGAAAATAATCACGA TCTGATCTCATGTTAAGAACACGTTGCTATTTCATCGGGTCTTCAAGTCA CTTCGGCTTTTTGTTTGTTTTTTTAGCTCTAACGAGGCCATGGACGAAAC AGATATTGGCGTGTATTGGCGGAGCAGTCAAAACATTCATCTACGATGTT CGAAATTTCATTGACTGTCAACATAAGTGTGAAGCCGAACCATCTTGCAA ATCTGTCGAATATAAAAAAAGAATGCTTGTTTGTCTACTGTCCAAAGAAA CAACTTCGAGTGCTTCAGAGTATTATGAAGAACCTTGTGATAAACATTCT GAGAATACTTTCTTTGCCGAAATAAAAGGTATGATATGGATTATCTTTCA TCATCAAAGTCATCATCGAGGTCAAAATTCAGAAGCGTAGACAGGAGGGG CGCAAACTTTGTGAAGGAGAACATATTTTATGACACTTTAAATATATATT CATAATATAAAAAGATAATTACCGTGTCATAAAAATCTGCTCTCCTACAC AAATTTTGCGTCCCTCCTGTCTACGCTACTGAAATCTTCTTCGTGTAACT ATCTTTAAAAAAGGCACATTGCATTTTCGAAGTGTGGTCTAAGGCTCTCC GAGCATCATTCTATTTCTTTATTTCAGGAGCCTAAATACTCCCCCTCCTC ATATCACAAGATAGGGAAAAACTTTAAGCTTGAGTTTGTTACCCGTGATG GATATCGACAAAGATTTTCTTCTTATCTTAGTCAATAGAGGTAAAATATA ATTCTGTTTTGCATCGCGTTTAAATTTTTCTCTTAGCTTCAACTATAAGA TGGGCTCCTCCTAAATTGGCATGTATCCGAGGACACAATGACAAGAGTCT TGAAAATATTCAAAATCTCAAAGATTGCGAATTCAAGTGTGAAGCCGAAC CCTATTGTAATTCTGTTGAATATAACGAGATGAATCGTCGTTGCCAATTG ACAAGAGAAACATCTTCAAGTGTGCCGAACGATTTCAAGGAACCTTGTCA TGTCAATCCGATGACTTATCGTCATTCTGAGATAGTTCCAAAAGGTTAGA TCTTTGTATTGACCTTATTATGGAATTTGTAGCAAGTTTGTAGGGAATCT CGCTAAATCGAATATCTATATAATTCGAACCAATACTCATTTTCTTTCAA GGAAAAGCCCTTGTAAAATAATCTCTATTAATCGAATCTCTTTTGATTTA CCAAATTAGACTTCTCGATTTCGAAATAGCCAAAGTAGATTGTATCTAAG TTCAATCATGCTCTGATTCAAATATGATAAGTGGGGATAAGATTAAGATT CGCACTTTATAAAGATCTGATCTCAAACATGTCAAACTGAATAGTTAATG AGTATACCAAGCTTGCGAATGTGTTGTGTTAGCCAATTAGAATATCAGGT GGTTGCATTGTTTATACCTGGTTCGTTTTACTTTTACTGTCTACTGATGA TTTTTGGAGAATTCTTTCTCTTTAACATTTTTTTATTTCTAGTCTTGACA ATGCCCTGGACTCGGCAAAAATCAGCGTGTTACCACGGAGTAATTCCTCC TAACAATATCAATAATATTCGAAATTTTAACGAATGCCAACGAAAGTGCG AACAAGAGACATATTGTAATTCTATTGTATATAACAAGAAAACTCTCCGA TGTCTGATGACAAGAGAAACATCTTCGACTATTCCAAATAATTATCAAGA ACCTTGTAAGAGCCCTGATCTTTCCTATGCTGAAATAGAACAAAAACGTA AGTCTACTTATTATTATGCTTACACTTGTCATTATATTCTTTGCCAACCT CGATTCCAGGGGCGAAAATCATTAAAAAAAGTGATGGGGATGAGGTTGAT TTCGTTTTATTTTATTATTTAGTTTCAAGGGTGTGAAAATAGCTTGTTTT ACAACCAATAATTCTTATAATTGATTGAGGACTTTTTCATGCGTTATAGT GCCTTTGTAATTTTCTTTTAATTTGCCGTTAACAGAATCCGGTGATTTTC GTTATCATCCTGGTTAAGGGGTTTATTGGTATTGTCGTTTTTGACTTTTA AAGTGTCTTCATTTCATCTGCATCGCTAAACTCATACTTTGCGGGTCATT CATAGCGTCAGCTAATTGGATAATAATGATTTAATAGATAAATTTTTCGT CTTTGAACTTTTTTTCTAGTTTTAACTGATGAATGGACCGATGAAATATT GGCATGCATCACACTAAAGCACAGTACCGAAATAAACATTGCCCGAAATT TCAAGGAATGTCAATATAAATGTGAAGCTAAATCATTTTGCAAATCTATT GTATACAACAAGAAAGATCAGGGTTGCTACTTGATGAAAGACACTTCTTC CACTGTACCACGTGATTATTCAGAACCTTGTAAAACTACCACTCATCCAG AAGACTATTTATATGCTGAAATAATTGGTAAATGTTAATTATATGCAACC CATGACGTCAAAACGGGGTAAAAATTACCCCTGTTACCCTCCGTATAGTC TGAGAATCCATTTGGAAGAAATTCGTCCTTGATTCTAAACGGAACAGGGA CCAAAGTTTTTCATTCCGACATGAACGGTTTTCGTTGCCCATATGATGAA GTTATCAATAACACGGCTTTTTTTCTTATAGAGCAATGTGGTATCAGCAA AGTTATACAGAAAAGAATTATTGGGGGACAAGACGCAGATGTTGGAGAAT ATCCGTGGCAGGTTAAATATAATTTATTTTCGAAGTCGAAGCATAAAAAA TCTCGTAAAAAATCATCACTCTGCATAATGTTTCATCCTATTAATAAGAA TTCCTGGTGGGGGTCAACAGTGGCCACCTGTCGGAGAGTCTACAGACCCA AAATGAGGCCTAAAAAGAGCAAAAGCTTTATAAGGAGCTCACGTACAAAT TACTTGCTTGAAAAACTCATAGAAGCGCTCATAAAAAAGCAGGAGTTCTA AACATCGACCAGAAATGGTGACCACGACGGGCGACCACGACGGGCGACCA CGACCAGCGACCAGATAAATTTGGATCGTCGAGTTTTTTCTCTTTTTCCA ACGTAGAGTGTCTCTCCTTATCATTTGAATATCGCATATTGAAGAGAAAG CTCACCCCTTTCTCAATCTATTTAGAGCCACATGCCCTATGCATAAAACA ACCATTTCGATTCGACGCTCTTGGAGCTTGATTATAGTGTCAATTCCTTT CCTTTTGTAATATCAGCATCAAAATACTTAGCGGCATAAAATTGTTTGAA ACTGGTGAGAAGCTTTGTATTTCATCATCAAATTGTTATTTCTGTCGAAA TTAGTCATTTTGTCAGTCTAAAGACAATTGAGTAATTGATTAGATTCATA TCTCTAAAACTGGCTTTCCAAATTTTTTTCTACTGACAAGTTCTATCTAT TCATACTAAAGACATCTCATTCAGCATAATTAAAATATTCGATGTAACAA AACTTACAAACATCATACTTAATGGCCCTGTCAATATTTTTGTCAAATAG TGTCACTTTGTCAAGAATATGACTGGTTACTTCAAAGGTCACTTTTTAGT ATTCTGAGGACTTGATTTAGACATTCTCTAAGGTGGAGAGAGCAGATAAA CTCGATAACCCAAATTTATCTGGTCACCGGTCGTGGTCGTCATTTCTGGT CGATGTTTAGAAACTCCCTAAAAATGCTTATGACAGCTATGGTGTTACAT AATGAATACTCTGTTTTTTAAAGGTATGGTATGCAAATGTTGAGTTTACG CCCACAGGAGAAAACTTTACGATTNTCATTTCTGGTCGATGTTTAGAAAC TCCCTAAAAATGCTTATGACAGCTATGGTGTTACATAATGAATACTCTGT TTTTTAAAGGTATGGTATGCAAATGTTGAGTTTACGCCCACAGGAGAAAA TTTTACGATTTGTGGGGGGAATTTGATCCACAAGAAATGGGTTTTAACAG CTGCACATTGTATTAAGGATGAGATTGTACATAACCGAGTTGAATTAGGT GAGTACACAAAAATTCATGATAAATTCATACTGCTCGTTAGCTATAGTAT TTGGTGTAAATAACATACCTATTTTGGAGGTCATTTCATTAAGTTATCAA CTATTAAAGGGACATAAATGTTTTTTTTTTTACTTTTGATAGAAACATCC TTTTCAGTTTAAATCTTTCCACGAGGAACGAAGTTTCAAAGAAAAATAGT CAAATCTTTACAATTCAAAAGCATAAAAAATAGGAAGAATGACTTTATCG TAAGGGTTTAATTTAGTCCTTTTTAAACCATGGATTGTTACCGATTGCTA AAGATTAAAACGCTGCAGACCGCTGCTTTTCCAATAGGTGAACACGTGAG ACAAATCAGAGGTGATGGGACACAGTTAGCACAAGTAAAAAAGATAATTC TACATGAAAGCTTCAATAAACCACACAGTTTCAGCTATGACTTCGCCCTA CTGGAACTTGAAACGGAAGTGGAAATAACGGATAGAGTTCGCACTATTTG TCTACCAAAGAAATATCAACAAAGTGAGAATCATTTCGATAATGATGAAT GCTATATTACTGGCTGGGGAAAAATGCAGAATGACAATCCAAAAATTCCA AAACATGGGGTATGTATTTAATGAAGAAATTGTAGGAAAAAGAATAATTA CATAATGGGCTGTTCCATAAAAATTTCCATACAGGAGGTGAAAACAAGTT TCTTGGAAAAGTGTAGATACCCCCTGGAAAATGGCAAAATTTGCAAAAGA ACCCTTGGAAAAAAATTATTTTCATGTCATAAAATGATGGTGGACGAACT AAAATCAGTTGTTCACCCCTTGAAAATTCAAGAATAACTTTTTACCCATG GAAAAATGGAAAAAACACTTCTTTAGACCCCCTCGAAATGTTCGTCCATC AAAAATCGAAGAAATAAATTACTCTGTAAGGGCCCCTTTTTCACTAGAAA TTTGGTCTCTCTAAGGGTTGGGTATCAGAGGTCCGGTCCACACATACCCG ACATTCTCCCAACCCTACTACCCCCCTCATATCTAAATTAACCAAATTTT TTATTGCGCAGACTTTGCAAGAAGCAACTGTTAGAGTGTACACAAAAGAA GAGTGTTTAAACGATCGGGGAAATAACAGAATCGATGACAGTATATTTTG TGCCGGATATCGTCGAGGTGGAAAAGACACGTGTAAAGGAGACAGTGGTG GTCCCTTACAATGCAAAGATGGAAATAGATGGATTCTCTGGGGTGTTACT TCTTTTGGAAAGAGACCATGTGCATCACCTGGTAAAGCTAGTGGCTATGG GAGAGTTACCCACGTTTTGGATTGGATTGAGGAGAAAACTGGAATAACCT TTTAATTATTTTTGCTTTGTTTTGCTACAAAGGTATTGCAAAAAGTTTGT TAAGAAAAACTTGTTGGAGTCATGCGGGTTACATATTTCGACCAGGCACA ATAATGGCATCATTACAATTTCATATCTAGACTTTCACTTTAACCACATA TTTTTCAGATTTTTCAATTCTTTTAAAACTTTAGTTTAGCCAATGAAAGC GTGCAGTGTTGAATAAAATATTTATCTTTTGATGTCTTTTTGGAGGTCCG GGGCCACTTGTAACATCTTTCATCAAAATGAAATATAAATAAGTGGCAGT TTAATTGATAAACTTTGTTTCAAGTGACCCACCAGATTTAATGAAAATCG ATGGATATAAATTTGTCTATCATAAACTAAAATTTTTGACTAGACTATCA AAATGAAACTTTTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064568TCONS_00064568Clytia hemisphaericatranscript
TCONS_00064567TCONS_00064567Clytia hemisphaericatranscript
TCONS_00064566TCONS_00064566Clytia hemisphaericatranscript
TCONS_00064565TCONS_00064565Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064566-proteinTCONS_00064566-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_419supercontigscaffold_419:272288..280853 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.4 0.58 0.68 0.44 0.54 0.46 8.17 5.36 1 1.04 3.43 0.64 6.76 4.41 0.03 0.06 0.06 0.07 3.8 4.43 0 0.02 0.23 0.19 0.1 0.19 0.27 0.08 0.1 0.23