XLOC_040319 (gene) - C. hemisphaerica

Overview
NameXLOC_040319
Unique NameXLOC_040319
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_410:176808..183196-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040319 ID=XLOC_040319|Name=XLOC_040319|organism=Clytia hemisphaerica|type=gene|length=6389bp|location=Sequence derived from alignment at scaffold_410:176808..183196- (Clytia hemisphaerica)
ATAAGAAGTTCACAATGTGTTCATTACTATTTTTTAGTTTCCGCCTCACT ATGCTGGAATCAGTGAACAACATCAACCTGCTGAAATCATTCCTCAATAC TCAACCATTGAATACACTTTACAGGTAATTTTGAATTGAAACTTATTTGG AAAGAAATCATTACTTGATAAAAAGCCTTAAAAGAAAGAAAGACTGTACT TGAGTATACTATATCCTTCTTTACACAATGTTTGTGACTGTTTTTGGAAT TTTAGACTTACCGGTCTTTTAGATAAAGATTCCAATGTATTTGTTACATT ATTATATAAACATCAATTCAATCTTTAATATAGTTTATATTCTCTTAGGT ACAATATAAGATATGTTTTTCAAGTTCAGCTTTTTGGTAATATTTTTCAA GCTTTTAGACAAGGAAAATTTAGAAAAACTCTGAACGATGGATAAATTTA TAATCTATTTTTTATTAAGTTCTCTAAATTTTAACGGACATATTTTAAAT TTGTATTTTCATCACTACAGAAACAAACAACAAGTCCTCTAGTTTTTCTT TTGGTTGTTGACACCTGTCTTGATGAAGAAGATCTGAATGCGTTGAAAGA ATCTCTTCAAATGTCCCTGAGTTTGATGCCTCCAAATGCACTAGTTGGTC TGATCACTTTTGGCAAGATGGTCAACGTTCACGAGCTTGGATGTGAGGGA ATCTCAAAAAGCTATGTTTTCCGTGGAAATAAAGACATTACAGCTAAGCA ATTACAGGTATGAATATTCAACGTGATTAGTTTATTTGTCCTGTGAGGAA TAATTTTGGAAAAACTATTTCATTTTGTCCTTAATTTCACAATTATCATA TCATCAAGGAATAAGAGATTTTTTTGATTACTATACTCATCTTTTAAAGA TCAAAATTCTGTTATTTTTATTCCAGGATATGCTTGGTCTTGGTGCATCT TCAAGAACACAACAACAGACACAACAACAGGGACGTGGACCAATGGCTCC CCAGCAACAAGAAGTTCACAATCGGTATGAAATACTTTTCTGTTACATAT GAAATTATGATATTACAAGATTGTATGTAAATAATAAAAAATCCTTCTTT TCTTTTGGGGGTGTTTTAAAAAACGTTTTTTGAGAGATGGCAATTGCAGA AATGTAAACCTGTTTTTTTTTTTGGATCATCAAAATCGTAATTGTTTTCT GCACGCCACACTGAAGCTCTAAAGGGATATGTGAAAATAATAATTTCAAA TAAATTGACTTTTTCCTCAGATGGTTAATTTTTAAGTGCCTTAGTGGTTT ACGGTGGTGTAAGCAAATAGTAATTACAAGAGTAATTTCTGTTTGTTTCA GATTTTTACAACCAGTTCATAAATGTGACATGGATTTGACTGATCTTCTT GGTGAGTTGCAAACTGACCCGTGGCCTGTTCCTGCTGACCGTAGACCATA CCGCTCAACTGGGGCTGCTCTTTCTGTTGCTGTCAGCTTGCTCGAGGTAA GCGTCTTCATTTTCCATTTCATTAAGAAAGGAAGAGAAAAGTTATGGATG ATTCCGATTCTAAAATGTTTAAGGAATATTTCTACAGTAGAGTTTCCTTT GTATCTCTTACAAGGTTCTCAGTAAAGAATGGACAAGTTTATATAATTCG AATTCTCAATAACTGGAACAATTTCAATTATCTGTGCATGTCTGATTTAT GGAAACTCAACTGTTATTTGTAACTTCTATATTTTTTTAAGAAAGTTTTC TTGCAAATAGTGTTCATCTAATAAGTCATTATTTTCATCGTTTCAATTTT CAGTGTTGTTATCCCAACACTGGGGCAAGGATATTGATGTTTGTTGGAGG GCCGTGTACTCAGGTACTTTTCATAACATTGAGTTTTATATCAAACACCC ATTTACTATAGGATGAAAAAGTTTTGACAATACCATAGTTAATGATAATT AAATACTTACTTTTGAAGATTACTTGAAACAGATTTTTCTCAAGGATGTA AGGATGTGCCCTGACCTGCCCTGACTGCAACTATTTTTGATTCTGCTCTT CTGAGGCCAATGTAACCAACCTTAAACGAGAGGTTCATAAGGGGCAGTAC ACAGGAATTTATCAAGTTAACGTTTGAAGACATCCTTTATCGCAATTGTT GAACCTAGAGTATCTAAATTATGAGCTTCCCTCTTATTTTTAAATGTCAA CCTTAAAATATGTCCTAACTAACAAGATTTATTTTAATTATTATTGGCTT GTTAAAATGAATTAATCTAAATTAAAGGTTTTATTTCTTATTTCTACATA CGTGTTCCCGTTTCATATCAGACACATATTTCATATCAGGACAGTGCCTC CCTTTTATTATATTATACTGAATAAACAAAAAATATTTTTCTTTTCCTCT TTTTGACCAATCTTGAATCACATCCGTGTCACTTCAATGTGAAATTAAGC TTTGTAATTAAAATTGATGAGTAATCAAACAATATCACTCTTATTTTAAA AACAGAACCTCTAAATAAACAATTTCATTTTAGTAGATGGGACAGGATGG GAGCCTCTTTTTAAAAGCTCATTAAACAAATTTTATGAGTGAAAGGAGTT GCAACCTTGAAATTTTGAAATTTATCGTTGAAACAAACCATTTCAGGATA AAAACAAAAAAATCCAAAATTTGTTGAGTTCCCCTTTAAATATCTTCTTT TTATGTATTATAGGGACCAGGTATGGTCATTGACCACGAATTAAAGAACG TCATTCGTTCGTATCACGACATCGAAACTGACAACACTCCACATATGAAG AAAGCCACAAGACATTATGAGGCTCTAGCTACTCGTGTCGCTAACAATGG TCACACTGTGGACATCTTTGCGTGCGCTTTGGATCAGGTTGGCCTCAAAG AAATGAAAAGCTGTGTCAACAATACTGGGTAAGACTTCAGCCCCTCTTCT TATCAAAGCAGATCAAAGGAGTATTTGGAATACTCTAGTGTTTGAACTTA ATTTAATGCCGGCTCTTTTTCCATCAAGGTTATCGGAGCATTTCGCATGT TATGATACTCTTAAATATTCGGTTTAAGAGAAATTTCTTCATTCGAACTT TCGCCTCAAGCTTCAGGACATCTACCAGTTTAACAGGGCTTGTATATGCT GTATAATATTACATGATATAGTCCATAGCCGAAATTACGGATGTTATTGA GCTACATGTAAAAGCTACATAGCACGACTCGTAAGAGAATATCAGCAGCC TAACAATCGACCATCATTGATATATTAACATATTGCCTTCTTCTTCTAGT GGCTACATGTTTATGGGTGATGTCTTCGATTCAGCTTTGTTCAAACAGAC ATTCCAACGTGTCTTCGCTAAAGACGCCAATGATGAGTTTAAAACCGCTT ACAATGCCAGCTTCGAAGTTAAGGTAAACTATCCGCTTGACCTTTATGTT AATACTCTATATTTTGAACTTTCATCTATTTCAATAGTTCTTTTACAGGG AATAACATTTTTTTTTCAATCTCTCTTTTTTAGTCTAGTTTTTGTTAAAT AATAAGCGATGACAGGTAAAAAAACAAATTACATTTATTTTTAAAGTTAT TTTTCATTGCAGACCTCAAAAGAGCTGAAAGTATCTGGTTGTGTCGGTAA TTGTGTTTCTTTGGAAAGAAAAGGTGGAAATATCTCTGAAACAGTTAGTA TTTTAAGTTTCTCGCACCCTTCGTGAATAACTTCCTTATATGAACAAGAA ATTATGGCGGAAAGAAAAACTGGCGGATTTACCTTAAATCCGAAATCAGC CTAATTAAGTCCCCGCCATATCCAGCCAAATCTAATCTTTATTCCATACA TTCTCAATCCGCAGGCCTAAAAAGATGTTTAATGCTTATTTAATAGCGAA TTTTTAGCCAGAAATATACTGGAACCCAAAACTTCTTCCTTTCAGGTATA TAAGCTTCCCAATAAACATGAATTATAGTCAATATAAGCTGCTGAGAATG AGATCGATTAGGCCATTGTTTCTAAATCATAAAACAAACCCCCGTCTCTA AACTTTATTCTGTGTTCTTTTCGCAGGAAATCGGTATTGGAGGAACAACG GCTTGGAAAGTCAGTGCTTTGGATCCCAACACAACTTACGCCATCTTTTT TGATGTAGCCAATCAAGTAAGTTAGGAAATTATGTTGCAATTTTAACCGA AAAAGCTTTTTCCTATTATAACTTTGTCACTTAATTTATCTTTAGGCTAT ACTTGAATTCGAAACCTATTATCTTCCTTTGTGCTCTTCATTTGGATAGT ATATTTAAATTTGATTTTGTTTAATTTATTTAGCTCGAGACCGGGAGAAG GTCAACTTCGAGGCACAATCAAACATATATACTCTTATAGTGTTATGTCT AAATTTTTCGAACGAATTTACTTGTATGTGTGTATTTTACGGACCCGAAT GCAATATTTTTCAATATTTTTTACAGCATACTGCGCCAGTTCCTCAAGGC GGTCGTGGCTGCATCCAATTCATAACGCAATACCAACACTCGAGTGGCCA ACGCCGTGTCCGCGTCACAACGTGTGCCCGTAACTGGGTGGACTCGTCCA ATTTACACTACGTAGCTCCTAGTTTTGATCAGGTACACCTTACTACCCTT CCTACACCATACCCGTAGTATACAAATAGATAAGTTTTTTAAGTCTTCGT CTCAACTTTCGAATCGACTACATTTCACTAGCAGGACTTAGATTTCATAT GCTGTATAACTTTACACGACAAAAATCTTTTTAGACGTAGCACATGTATA TTATACAATATTTTCATCTGAGGAGCCCAATAGAAATTTTAGAAGCTGAA ACAAACCATCTCAAACACGGATATAAAGAGGCTCAAAATTCTGCATAATT CACCGAATTTCAAGAATATAGTGATAATTTACTGTGTAAAACCAATCTGC CGTCTCGATAAATACCAATATTATTTACCAAGGTATTTATCGAGACAGCA AATTGGTTTTACACAGTAAATTATCACAATATTCTTGAAATTCGGCGAAT TTTGACCACTGAATATAAATTTTGGAAGCAGAAACAAACAATTATTATTA TTGTTATTATTAGGAGGCGTCAGCGGTCCTCATGGCGCGTGTCGCCACAC ACCGTTGCGAGACGGACGATAATGCTCAGGATATCCTGCGATGGCTGGAT CGTATGTTGATCCGATGTGTTCAGAAAGTCGGCGAGTACAACAAAGATGA CCCGAATTCGTTAAGATTAGCTGAAAACTTCTCACTTTACCCACAGGTAA GGTTTAAACGATTTCATTTTCAGCTGAGGTCTTGAAATCTTCTAGAGCGT CTTTTATTTTGAGGATTTTGTGTAAAATGCCTTTTAGATTTTACTCATTT TTATACAATAACTTTTGAAACATTTAGCTATGGACAGAATAGCAAAATGT CTGAATTTTTTAATTTAGTCAGTGACTGTTTGAAGTTTTCTTTTTGGTCA ATACTTTAGGGACCAGAATACAAAAAAAAGAATAATTTGTCATAAGCAAA ACTGAGTCATTTGGGAAGCCCAACCTTACTAAAATCGCTCATCAGATTTG AAATGCACCATTACTAGCCTAGAAAGCTTTCCTATTATTTATCTTCCCTC TCTTTCTTTTGTTTTGTAGTTTATGTTCCATTTGCGTCGCTCACAATTCT TACAATACTTCAACAACAGTCCGGACGAAACATCTTTTTACCGGCACTGG TTGAACAACGAAGATGTCACAAATTCTCTTATCATGATTCAACCCATCCT ATATTCTTATTCGTTCCATGGTCCACCAGAACCTGTTCTCCTGGATTCAA GTAGTATCCAACCGGACACTATCTTATTATTGGACACTTACTTCTTAGTC TGCATTTATTATGGAGAGGTGAGATTCGTTTATTTTGCACTGCAACAAGA CTTAACAATAAATAAAAGGAAGAAAAAAATCTTGCTCCACATCTTTCTTT ATTCATTACAAAAGATTCTATTTATTTCAATCTGCTGAATCAACATACAT TATAACTATGTAAAAGGTCAATGGCTTTAACAAGTTCACTGTTGAGCCCT GTTTCAGAAATCGAATAATTGACATTTCTGAATTTCCACAAACTATCCGT CCCCTATTGCAACGCGTCTCCGGGTGGGCTTGAACCACCAACTGCAGTGT CCGCAGAGTTATTTAGAAGACAATAGATTGCTCTTAGAAACAACAACAAG AGAGCTTAATCCATCTATACTATTCAGTTGACCAGACTGAATAATGGGTT TATTTATATTTATTTATATTTATAAACACTTTAATTTCATTGTTTTCCAT AGTGGAAATCAAAGGTCTTTACTTAAAAGTCGTTTCCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064312TCONS_00064312Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064312-proteinTCONS_00064312-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_410supercontigscaffold_410:176808..183196 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SEC23APREDICTED: protein transport protein Sec23A isoform X1 Homo Sapiens
SEC23Bprotein transport protein Sec23B isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
82.34 82.77 71.56 78.86 63.55 53.54 160.7 174.22 93.74 121.95 153.77 118.79 129.2 132.18 101.8 134.14 82.61 95.63 74.6 86.13 61.42 68.85 77.58 83.15 112.23 108.69 59.97 61.05 114.42 98.41