XLOC_040233 (gene) - C. hemisphaerica

Overview
NameXLOC_040233
Unique NameXLOC_040233
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_41:335998..339387+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040233 ID=XLOC_040233|Name=XLOC_040233|organism=Clytia hemisphaerica|type=gene|length=3390bp|location=Sequence derived from alignment at scaffold_41:335998..339387+ (Clytia hemisphaerica)
ACAGTATCAGACAACATCGGAATCTTTTTTCCGGAaacatatataatata
taatataatataaaataaataccTTTTTTTAGtaacacagaaaaaataaa
agattccCTTCAATAGAAAATGTCAAATGTACCAACGTTTGATCGTGGTT
CCTTCTAATTGAGCGCCATATATCATTCTCCTACAGAAGCCATCGTAATA
CTTTAGATAAATTAAACAAAATAGAATTGTGtagcaaaataaacaaaatt
cttACCACCAGCATCAAACTATGGGTGCAATCTGTTCCCACAAAACATTG
GTTTCAAAATCCTTTGTCTACATCAAGAGTATCCAAAAGTCATCCAATAT
TAAAGTTCCACTGTCAGCCAAAGAAGTTAACATCTTGAAAAAAACATGGC
CACCTGTCAAAAATAATTGGTTGAAAATATGTTTAGTGGCTTTTGAAAGG
TATAATTTTGTgctttataatatatttttcagacCCAGGTTTACTCACGC
TCCTCCCCTGGAATGGGAACGTTTGAGCCTTTAAGGTCTTAATTAAAGTT
TCATACCCATCTTTGGATTCTTAACAGTATCGTGGTGGCAAGTGGGCACC
GGGTGAAAACTACCCCTCCCCACAAAGAGGCCGGAAAACAAGGGGCTAAA
AAAAGGTGCCTCTGATATGTAATATCAGCGCCCCTTTGCTTTTTTACACC
TCTGAATTAGcagttttcaatcaaaaaagctCGCTTCGGTCGCGTAACTT
ACAAAGATATTTTACTTATAAAAGGGGGCGCCGAAACCCCGAATTTCCAA
AATTGCCATTCCAGTTTTGACCGACCCACTACGCTACCGATTTTAAGAGT
TTTTGATACGATGTGGAAACTAAAGAATCGATGAGCTCTTGTTGGATGAT
TCTGTTTATCATTTTACCTATCTCCTCCATTTGCTTACAcatcattttta
aacaaaagaaagatcaaTTCGCTCCCCTTTCGCCACACCCcctttctata
tcataaaaCAGGCACAACGCAACGGGTAAGGCAGGTACGGTggtcgccgt
accagattttcaccaaaaaaaacccaaaattttcctcttcgtcggtaaaa
tcgctataaaaccgcttaaatttcctcattcgccttaccagatataaaaa
gcttccgtcgtacCTGTAAAAATGAATATCTACACTACTAAACTTTCTTT
GCAGGTGGTTCACACTATACCCACAACTGCGGTATATGTTTCGCTCCCTA
CCCGAAGACATACAATTCGAAGATCTTTTCAAAACAGATGCATTGAAAAT
GCATGTTGATAAAGTTCGTGATGTTTTAGAATTGTTGATCAATAAGATTG
ATAATGTTGAAGAACTTGTCAACACATTAGTAGACTTTGGAAGACAACAT
CATATGTTAGGTGCTGAACAAAGATACGCAACTGTAAGTttttaatcttt
tgttttatttttcatcacAGTACGTAACTCAActtagcgaccgtagtgca
gtggtagagcatccggttacggtgcgcaaggttgtgggttcaaccctcaG
TCTaatcataccaaagatttccaaaaaggTAATTGATGCCTCTCTGTTTG
GTATTCagtaattaagagaaggatcaagggtaagtggagcaatccaggga
gaaagagtggtgccctcccctaccttcgggtagttagctatcgaaagagg
agccttcggatCGCCTCGGACTGCAGTCGCAGTCTTACTTACGTAACTCA
AATCGATTTTCTAgctagaaatattttttgcctTGTGCTGATTCAactga
cgctctctaattcgattttcaaggggaatcggattttcattgaataaggg
agcgtatcaaatagtagagcgtcgtttatgagagtgtctttcaatattat
cgaataatgaagtgtatcgaatagtagaacgtcgaattagagagcatcaa
ctgtagcTACAAGATCAAATTTTGTAAACTTCATTGTTCGGCAAGGTTTT
TAGTCGTTTTTGAATTATTTATACCATAAAACATTATTAGAGAAAATTTG
CTTTAGATACCGCAAAAAATTACACTTTTTATCTTAtatgtagtctagca
agctagacgactaattcagacatagtagaaacaATGAAGCAAAAAGTAAA
GGGGGGAAAATTATACAAACTAAATaccgtaacaattatcgtattatcat
ataacgcctatacttcTGTAATACACGCATTATAAATGACTCCAGTCCAT
CttaaatgaaacttttccaaaGCGTCAGAATAACGCAAAGTCGTATTTAA
AGCTCTTTAAtgattcaaatataaaagtatGTTATGAAATTTCTTTTAGG
CGTTGGCAGCGAGTTTCCAATATGGCATTTGTATGATAATGGACGTAGAT
TCGTCCGTCGAGAACGCGTGGGACAGTTTATTGCGTTTCGTCATGGATCT
ACTAAAGCTCGGTATGCGAATGGAAAAAGAAGCACAAGAAAAAGAGAGTT
TAAATAAAGGCTACAACACAGAAGAACTATTAGAAAAAGCTCAAGATGGC
GGAGAAGCTTTGGATGAGAATGAGAATTCCGCTCCGATGCCGCTTGCTTT
GATAAACGAAGATGATTCTACGAGTAGCGTAAGGACGTTTCATGTCGCTG
AAGCGGATCCAGACGGCTGATAAATTAGCTCAATGCCGTTCTTGTTTCTG
TTGATAAATGGTTGTTTAAGGAGGTAAGGATGGAATGACACGTGAATGGT
GTTGCAAAGAGACTGGTACGGGTTATATCGTTGTTAATATCTGACGCACG
TAAATAaagacatttgattggcttctttacCATCTAATATATCGATTATA
GCTTACGATGTATTTTGTTTGCAAATTGGATTcgaatttatttaaaataa
cTGTTTAATATAATGCCTGATACTTCGTATGAAGGACGATTGTTGGAGTG
AGAAAAATGCCTTGAAAAGGCGAGAGATGATCTTAACACACCTTGAGATA
GCAAGAGATAATGTCAACATTATTGGAAGGGACAGCTACCGGAGAGAATT
TGTCAAGCATTTCCAATCAAAAGAAACATAGCGTGTTTCACCGTTAGACT
TGACATTTATTTCAAGCAATTATTTATGTATCCTACAAGGTTTTTACTAT
GATTCTCTCACAGACATCTACGTCAAGTGGTACCCTGCAGACTGATTTTA
CGTTCTCGTCTTAGCAGGAAGAAACAAATCACAGCTTGAAGACTGTGAAT
AAAAAACTTCTTGAGAGACTGCGTAGATATATTAAATTTTGTGGATTCTT
TACTACTCGATTGCTgggtaaaatataaatattgctTTATTTCGCAATTT
GTAATTCTTTTCCTTTTTGTAGGTCATGCTAACTTTTTCA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064166TCONS_00064166Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064166-proteinTCONS_00064166-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_41supercontigscaffold_41:335998..339387 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.09	0.07	0.03	0.05	0.06	0.03	2.11	2.09	2.69	2.67	2.09	2.16	1.36	0.54	0.04	0.09	2.03	3.16	3.22	4.36	7.13	5.95	1.78	2.84	5.8	5.4	0.13	0.07	0.18	0.27