XLOC_040209 (gene) - C. hemisphaerica

Overview
NameXLOC_040209
Unique NameXLOC_040209
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_409:52618..56422+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040209 ID=XLOC_040209|Name=XLOC_040209|organism=Clytia hemisphaerica|type=gene|length=3805bp|location=Sequence derived from alignment at scaffold_409:52618..56422+ (Clytia hemisphaerica)
cctccttctcacacaATCCTGTTTGGatttttcagtcagtggggtaaaaa
ataacggaccaaaacacGATAGGGATTGATTcccatgtttttcttttcga
cTGATGATTTGAATTCAGTTTTCGAACCTAAAAAAGTCAGCTGGGTGAAA
AAAAGCACAATGTTTTGCATGCAGTGATGAATTGTTTACCTGATCATttt
cagcggagacaaaaatttgagtataatttcccaccgggtaaatattttgg
ccaatctttCCCttgcattatcagctttttgatgcttgctaaaattaaaa
attccaaaaatgtcaTTTCATTTTAGAAATCAGCCAAGATATGACTAAAA
ACGGTCCAGCTCTTTTGATTTTATCCATCATCCTGTTACTAGGGTTACTG
GTAACACCAATCAATACTTTGAGTCTTCAAAGGGAAAAAGATGGCAAATC
AGCANTACTGGCAACACCAATCAATACTCTGAGTCTTCAAAGGGAAAAAG
ATGGTAAATCAGCTGTGAACTCAGATATTGCTTACGTACAATGTAGAAAG
AATGCAAAAGCATATTACGGACAATGTCGGACATTAATGATTCAACATGC
TGAAGGAATCACAGATTCTAACGAGCTTCAGAAGTTGTATAAAGTCATTC
CAGAGAATATGAAGTGTACATACCTTTGGATGCAAATGAAAGCAAAGTGC
CAAAAAGATAGACAAAATGCTGAAAAGAATTGATTTGTGTGTGAGCAATA
TGCTGTATGCCAGCATGATTTATTTATCATGATTTTACTTTGTGTAACTT
CCATTTTGATTAAAGTCaataaattatatatttttggatgaGGTTTAttt
ccaacattttttaatcgGATTCATATCAGTTCTTATCAAGAGATCCATTA
GACCAAAACTCGTGACATGATGAGTTTCACCTCGAATTCGAGTAAGACAG
CGTTTGAGATAACTCATCAAATATATGTGAATTAGCTATTTCAAATATCT
TATTGTGTTTTTTCGTCGCTGGCGTTATAAGGTCCAGCGTAAGGGGCTGT
AATTATGATAAACCAggctaaaaaagaaagaaatgctTTGGCGTAGTAAG
AACCAGCGCCTCGGGGggatactaggtttgcgaggtgacgggtatgtcca
agccgaaaatcgaaaatcgaccctttgagagacaaaattttggtaatttt
gggaccctttgagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttg
atgattttaacgaggcggcaacgaagctagcagtgttatcttcaaaaata
caaaggagatggatgtccagtcgtttatatgttcatggaaAGACCAATAA
TAAGTTAAAGCCTGGCTTATTTTCCAACTTATTCTTGTAGTACGTCTTCT
ACAGCCAGAAAGGTTTCTTTCCCGTTTATGTATTGCTTGCTTTGAGATAT
TATACACCtcaacatgtttttattttttttagattaccgaaaaaaagaag
aatcaaaaatgaaattatccATACTATCAGTGTTTGTCATCATTGCAACT
ACTTTAATGATAAGAGAAAGTATTTCGAAACCATATGGCAAAATAAATAA
CCCTGGATTGGATTATGGAAATTGCATCAAAGAAgctaaagaagaagaaa
ataaggTAAGGGgaaaaaacatttgattttcaTTGATTCGGGTTAGAttg
gagcgatggccaagtggtcaaagacatcagcgtctcaaaccagggattcg
tagttcgaatccccgctccttccaatgttccgttcagttcatagatcgTT
CCAGTGCAAGGTCGTGGACCTCGTGAAACAATCGagagactgtctaaaag
tcctagatacTCTATCTGTCACAAAATGTCGGGAACATTGTTACATTATT
TTTGTGGTGGAAATTGGTTTACTAAATGCAAATTTTGCTTGATTTCTTTT
CTCTGTTAAATCACTGGAAGACTCAGCAACCAAACAAAAAAAGTGGGAGA
AGTACCGTAATTTCAAAAGGGCTTAACCCTCCTCCTTTACATATAGAGAA
AAAAACGGCCCTTAGCTAGAGACTGCtgttaatttttgttgttttggtaa
TCTTTAGATAGGCTTTAGAAAGTTGAAAGCGGCAAatttatagaaaataa
aaataaaagcgCCTGCTTATGTTTGCTTAtgaattggaaatatcttgaaa
atatgcatatcatattttcaagatatttctaggattggaaatctcttatt
tcacCCATTGTGACTGCTTATTGCTTATTCTTAAATATGTTTGATATTTT
AGTGTCGTCATTCGATCAGAGAATTTGATGTGAAAAAGAAGACACAAATG
CAAGAATACCAAGGATTGATGAAGAATCATAAATGTGAAGTGACTTATCA
GCAAAGAAAATCAGTGTGTAGAGAACAACATTTTAACTAATTATATTAGA
GGAAATGATTTATTGAACTTAATGATCCTTGGTTTGAAAAATATACCTGT
GTAGATTTCACTGATGATTGGTGCCTGAGCACCATGAAACTatgagtttg
aaatttagatattgtgtcaactcttCATTATACCTATCTAGATATAGCTA
AAAGCAGGAACGAAGATTAAACCCTTTTCAGCAAGTGTTTGATGAACATT
CTATTTCCAATCAATTATATATATTGGGCATAGCATTTTTACATTCGGAT
CATAATCCAATAGCAATTCTAAAAATCTTAGTTACATTCCCGTTAAGGAT
AGGAGACTACCCTAAGGTCCCAAATAGTGGGCGTGTCTGAATAAAAGGGG
AGGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064132TCONS_00064132Clytia hemisphaericatranscript
TCONS_00064133TCONS_00064133Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064133-proteinTCONS_00064133-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_409supercontigscaffold_409:52618..56422 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.5	0.2	0.45	0.52	0.06	0.03	0	0.21	0	0.03	0.03	0.12	13.89	12.53	0	0.02	1.4	2.24	52.28	51.34	15.9	16.89	4.03	5.07	4.63	6.47	0	0	0	0