XLOC_040166 (gene) - C. hemisphaerica

Overview
NameXLOC_040166
Unique NameXLOC_040166
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_407:157794..161678-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040166 ID=XLOC_040166|Name=XLOC_040166|organism=Clytia hemisphaerica|type=gene|length=3885bp|location=Sequence derived from alignment at scaffold_407:157794..161678- (Clytia hemisphaerica)
AAATGATCATGAAATTTTCTTTAAGCACAACGATATGATGAGTGAACAAG
ACAAAAAACGAAAAGAAGACTTTAAGAAACATGAAATGGATAAAGAACAC
GAGCGAAGAGAAAAACAAAAAAATATGAGTGAAGAAGAACGCAAAAAGGA
TGATGAGGAATACAAACAACATCATGAACAAAAACATGAATCAATGCATG
AACCTGTGAGGATGATTTTAAAATTATATAAAGTTTTAAATGCTTTTCAG
TATTTCTTTGGATTCTTATAACTAGATAAGTAAATACACTACAAGCCTAA
AGAAATGGTGAAGAAAAAATCATTTATTGTTCAAATGTTTGACTTGACTA
ACATTTCAATGTTTATTCAGCTGATTTGATCATTTTTTTCTTTTTCGTTC
TTTTTCATAGGGACATAAGAAACAATTAGAAGAGGTCTGGGAAAAGGAAG
ATGGTCTAGATCCTGATAGTTTCGATCCACGAACTTTCTTCAATTTACAC
GGTAACGACTTTCATTTAAAAAAAACATATCTCAATTTGAAAAGATTAAT
TAAAAAAGAACCTTGGAAAGAATCTTTTTAAAGCACTTTTGTCTTTTTCG
TCAATTTCTAAGGAGGTTATATCTTGAATAGATATTTCTTGTATCAGTTT
TTTTTTCATTGAAACTTTTAAACGAGTAATGCAAAATTGTTCTTGGGATA
TTTCAAAATCGGGTTGATATTATTCAATAAACAACTTATATACACGTCTC
ATTTCACACAAGCATGTTCCTTATACATCTTAACTCTTCCTCCTCTTAAT
AAATCACTTCCTTATCATAAACTATCATTACCGCCATCCAATCAAGAATT
ATGAAGGAAATCCCACAAAATAACTTTACGCTTTTCAACAATTAGATTAT
AATTATTTCAAATAACAACCTGCTTTCGATAATGTTGATGTAAACAAATA
CAGAACATATTTTAAAAAGGTGATGAAGTAAAATCAACACAAATAACAAT
TCATTATATTAAAAAAAATATATTATTCTTTTCTGTCTTAAAGATTGTTT
TCTTAAGTTTTCCTCGATTGCATTTTCTAGACAAAAATGGTGACGGCTAT
TTGGACACTTATGAATTGGAAACATTCTTTTTATCTGATGTAAGTAGGGG
CCTAAAAAATTCATTCAGAATAAACCAAACAGATTACCAGTCACCAGAGA
AAGAGTAGTTACAAGTGTAGAACAGCTACTTACCAATTTATGATGACTAA
TTTAAAGAATGAAAAAAACAACTAAACTCTAATCATTAATGAATAAAATG
TTACCCTAACCTAATATTGAAGTAATATTCAAAATATACAAAAGTTTAAA
ATCTAATTCAAAATATAAAATCAAAAACTGCAATCCATCAAAAATTTAAA
ACTTAAATCCGAAGAAAAATCTTTAAAAAATACTGTATCAATCTTAAAGG
CATAACCACATGGTTTGAGATATTTGGCCTATAGATCCCTCCATGGACCT
GTGCAAAACCTAACCTTTAATCCTTTTTCCTTAACTCCTTTCCAAATTCA
TATTATGATGATTAAGTTTTTTTACTTTTATAAAGAATTGTCTAGATCTC
GATTTAAAAAATGACAAATTTTCATACAACTTTGGAAAAGAATTAGACAA
AAAGACTCGTGAGTATGGAAGGAATCATACTGCAGGACATATCTCAAACC
ATCTGATAATCACTTTCAAATTACTTAAGAAAGGCACTGTGCAACTTTGT
AAAACAAAAAATTAATTGTCAAGATTAATTATTAATCTAATAACCTTTGA
AAGTTTTTAAAAAATCCATCACACACAACATTGCATGCACTAGGTAATCA
CAGCACTCTAATTTCAGACATTTTCTTACAATGCTGGGTTGTAAATTAAC
ACTTGACTCATTTACTGACTTGTCTTGCTTACACAGACAAAAATAATGAC
GGACACTTGGACACCTACGAACTTGAAACAATGTTCTTAAATGACGTGAG
TAAATCTTAATCTTAAAAATGTTTCTAATTTTAATGATATTTTATTTTTT
ATTAAAAAAAGATAATAATTCTAACTTTGGAGGTGACTTATTTATAATGA
TCTAAAAGTTAGTATCTAAGATTTCCAAAATAGTCTCTCTCTTGAGAATA
CACTCTTAAGCCTCGTTAACATAATGTAATGTCGTTTATATAATTGTTTA
TAGTGAATAAAGATTAACTTTTGTTATGTTACTGCGCTAATCAAGTTGAC
TAAAATTTTGGTCATTTCACTTTAATATGAAGTATTCGTTATTTACAAGC
AGTTTTTATTAAGATAGTCTGTAAATAACATGATTGCTTCTTCGTAGCTA
ATATTTTTTCTTCCTCGTTTTCTTTCAGTTGGACAAGGTGTACAATGAAT
CAGACCCAAATACTGATAAACAAGAGAGAGAAGAAGAAATGGAAAGAATG
AGAGAACACGTCTTGAAAAATGTAACCATTTAATTAGCCCTAAAAAGTTA
ATACATTTGAATTACTATAAATCAGTATTTCAATAAGACCTTTTTATCGA
AGTTGCGTTCTTGCAGGTCCGACTTGAGCAGACTTGTATCGTGTAGTGGA
TGTTCATGTTCAAAATCTTTTCTAAAATCTTAACCCGTTCTGTCCCACAA
CTTTCGCACTTTTGAAAAAAAAAATACAATTTTCAATGAGCCCAGGAAAC
CTTATGAATCTTAGCCCGTCAAAGGTGAAATATCTGGGGACCGCCCACGT
GGTCCTTTGACTGAAAGAGTCAAGTACTGATGTTGTTTTATTTTGGGATA
TCAAATTATTCATGGTCTCCCAGTTTCTAGATATTACAGAGTGACTTAAA
TAAAAGCAACCCTCTTGGTTTCATCTTGGTTTATTTCCATACACTAAGGA
GTATATTATACTAATGTATTTTCTTTCCAATCGGTCAGATGGACACGGAT
AAGGATGGATTAGTTTCATACGACGAGTTCATTGCCGAAACAAAAGACAC
AGATTTCGATAAAGATGAAGAATGGAAACCTTTGACTGAAGAAGAACAAT
TTAGCGATGAAGAATATAAAGAATACGAACGATTGTTATCGGAACAAGAA
GGACATGTAAGTAAAAGATCTTGACATTTTAAGTAGCGCGAGTGTTACTA
CTGGTGCTCGGGGGGATTAGGTTTTATGAGGTGACGGGTATGTTGTTCGA
GTCAAAGTTTTGAGAGACTGTATTTCGAAAATTTTGCCCTCTGAGGGACT
ATTTTTCCCAATTTTCAAACAATCAAAAATTTCAAATTTAATCCCAATTA
CGAGAATTTATTATCGTAATTTTAGGACCTTTAAAAAGACTCCATTGCTA
ATTTGCTGTTTTTGTACCCCTGTGAGAAACTTCCGAGGATTTAAAAAGGA
ACCCTTATGGCTTGCACGTACCCGATACTCATTTTGCCCGAGTACCAGCC
CCTCGGTCTAGTGCTGCTGATGCCCTTAAGTTCAACCAAACAAGAGAATC
TGGTCAGTGTTCAGTTTATCGCTTAAGGCGTGGTCCATTTAAACAGTTTG
TCGCAAATCTTTTCATTCTAACCTCTTTTAATTCTTTCTTTTACTCCAGC
ACGAAGACGAAAATCACGTGGAAGGAGGTGCACAGGCTGAAGTTCATCAC
TAGTCATTAGCCTGTCTTCATAGTCAATCTTCTTTGTAAATTATTTCTAT
ATTCTTGTAGGGTGTAGAAAAATAAATTTGTTCTTTTAGATTTTGTAAAA
ATTTTATGATTTTATGGAAGAGGGGTGCTCAATGACAAACTCATTTTTCT
CTTTCTTTCACCAAATGACGATTGTTTCCCTTGCTGCTTGATCTCCACAA
CCATAAACTGCTTATATTATATTCCCCGTGAAATG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064062TCONS_00064062Clytia hemisphaericatranscript
TCONS_00064061TCONS_00064061Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064062-proteinTCONS_00064062-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_407supercontigscaffold_407:157794..161678 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
229.42	223.33	186.53	169.99	160.67	124.11	176.29	181.46	167.98	125.14	182.6	220.55	213.06	206.23	186.32	196.27	118.54	160.8	253.16	240.73	210.94	196.98	196.09	192.12	235.19	264.77	91.02	102.09	208.76	233.64