XLOC_039854 (gene) - C. hemisphaerica

Overview
NameXLOC_039854
Unique NameXLOC_039854
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_394:5488..8712+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039854 ID=XLOC_039854|Name=XLOC_039854|organism=Clytia hemisphaerica|type=gene|length=3225bp|location=Sequence derived from alignment at scaffold_394:5488..8712+ (Clytia hemisphaerica)
CTGTATTAGTATGATTTCTaaactctttgtttttcttcaaaagattgtat ttaatatgttttttttttcagaaatgagaaacttcTTCAAGGTGTTTATG GTATGGGTTTTAATAAGCCCTCAAAGATTCAAGAAACTGCCCTGCCAATG TTGCTCGCTGATCCgtatgaatttcttttcttttatgttCATCTGTTCTT TAAATAGACATGTGCTCTTGATGCCATTTTGACTCAAATATAAGTTTTTT GAATACCTTGAAAGTGGTAGATTCTGTAGACACCCTTGTGACTTTTGGTT GATCATACTTTTAAGGCTATTTTGGACCTGCCATCTCTTCAAAATTCCAT TAGGGGTACTTTTTCAACTTGGTTGCAAGCCATGACCGACAATCCCGAGA AATTCTTCCagtgttttgttagaagcaagCCAGTTGCCCTTGTCCCATGC ATCTGCCATAAGAAGTGGTACATGTCCTTCTATTTGTCTTAAGAAATCTA CATTTATGATATGCGGCTATACTTCTTAGTAAACTCTATTTTGCTCAAAA TACTATCTagtatctttttcattttagacCAAATAATATGATTGCACAGA GTCAGAGTGGTACAGGAAAAACTGCAGCTTTTGTGTTGGCAATGTTGAGT CGTGTTGATAAAACAAAACCTTATCCACAAGCACTATGTCTCTCACCAAC CTTCGAACTTGCAAATCAAACTGGCAGTGTTTTAGAAAAGATGGGCAAAT TCTTGATAGAAGACGGACTTAAAGTTGCTTATGCACTTCGAGGAAATAGA TGTATTGCTCTTTTGATTTCTTGTTGCTTTCTAATTTTTTgtcgaaatct aaaaaaaagaaattattttatgaATGTCTGCTTTTTAAATTTCCAGAATG CTTgaaattgattatttttttagttttgtcttttctgaattttattattt ctatttttcaacaatttttcagtGGAAAAGGGTAGTAAATGTGATGCACA AATCATCATTGGTACACCTGGCTCACTGTTGGACTGGATCATGCGCCATC GATTTTTTGACCCCAAAAAGATCAACATTTTTGTATTGGATGAAGCCGAT GTCATGATTTCTCAACAAGGACATCAAGATCAGAGTATCAGGATAAAAAA GTAGCAACcttttttctttaagttttCAGAGAGATTTTGGTAATTCCTTG GCTTTTGGTCTTAatcttacattttttgcttattaaAAGCTGAAATATTG ACAGAAACATCCACATAAGTTCATCGTTGTGGAATTTTGCAGCGTTACAA TTCTATGCAATTTTCCACAACTTTAGCGTGGTCAAACTCAAGCTTCAATT AGAAGCGTTGTATAGAATAGAAGCTCACCCTTGTGGAACCTTTGTGAAAT ACTGCAATGTTGCGGAATATTGCAGCGCTGAGGAATATTGCAGTGCCTAT GAACTTTGCAATTTGACAATCTGATATTGCTCTAATGCATGTATATTTTT GCATCATAGGGCATTGAACCCATCAGCGCAATTGCTGCTATTCTCTGCAA CATACGAGGCTTCTGTGATGAATTTTGCTCAAAACATTGTCAACGATGCA GTCATTATAAGGCTACGAAGGGAAGAAGAAAGTTTGGACAACATCAAACA GTTTTATGTGAAATGTGACACAGCTGAAAGTAAATACGAGGCTCTTGCCA ATCTGTATGGTTCTTTAACTATAGGACAGACTATGGTTTTCTGTCATGTA AGTGAAAGTTATGTTCTTCATTTTCTTGCATGCTTTTCAATCTTGAAAAT TCAATATAAGCAAGTTTAaaaataccttattacatgaaaattAGGAGACC TGTAATTAAAACGAATTGAGAAATTTTGTGTTAGAAAACCCCTTTAATTA AAACGAGCCGTGGTGTCCTTGCGAAAAGCAatggggcacgcagttactac aagacagtatgacacttactaccgtggtggtactgtattcagaagttacg aaaacagttactacacagtgtagtaactgctgtttgggggtggtgccaaa cactaaaactagcacttttggtgtagtaagtgctNgatatttatttattt taaacaatGATCAAAAAATGATTGTTTTAGACTAAAAAGGCAGTCAACTG GTTATCGGAAAAGCTATCCAAAGACGGACATGCTGTAGCGCTGTTGACAG GAGAGCTTGAAATTGAACAGCGGTTAGCTGTTTTGAACCGTTTCAGAGAT GGCAAAGAGAAGGTTTTGATTACCACTAATGTGGCTGCCAGAGGTATTGA TGTTGAGCAAGTCACCATTGTAATCAATTATGACATACCTATAAATCATA TGCAACAACCAGACTTNattttacaaaaaattaatttttttgtgaaaaaa ttctttgttaaaaaaaatatttttgttataaatggacgaaaaaaattttt tctcagacccaactttgaaattatgctttccctaattatcattaaaatgt tctcaacagctgttaaccaagtaaattaaaagaaaatctagcacaaNAGC AATCAATTTTGTTGATGGGACACGCAGCAGACGACAGGtggaagaaattt caaaacatttcggGAAAGAGATTAAGTTATTACAAGTTGATGATCTGGAT GAGTTGGAAAAGCTGAATcaataaattattttcattgattGATCATTACT TTGACCCTGATGTTGCGTTGATTTGGCTTTATAAGAATGGtttcaagata aaaacaaagataatTAAAAGACGAAAACAGGAAACTTCACCAAAAGATAC AACTGGTCGATAATGTTCCTCAACACAAACTATTTTTTGTTCTCATGAGC TAACTGAAAAGCACTGTAAAATGATATTGAAATGAAAAGCCCAAAAGGAt ttctgatttcaaaatttccactTTTTGTATCaacttaaaaagcattttgt tgTCCTCTCATTCGTGAAACGCAAGGCTTAATNCTCATCTTCAAAAGCAT TTTGTTGTCCTCTAGTTCGTGAAACGCAAGGCTTAATAAATGATATTCCT AATGACTTTCATGTATTCGTGCAACAATCAAGAAGTTACAATGTCttgtt tttgtatttaaaatttctttaaaagttttatttgtaaATGATAGGTAGgc tttttttgtcataaaaaagaaactttgtatATGAAACTCTGTCAAATGTC CAAACCAAATGAACTATCATAGcct
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063568TCONS_00063568Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063568-proteinTCONS_00063568-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_394supercontigscaffold_394:5488..8712 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
DDX19AATP-dependent RNA helicase DDX19A Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
109.46 110.44 72.48 60.44 100.44 73.78 82.42 88.33 67.96 73.41 73.29 67.83 72.25 77.42 83.57 104.58 88.4 82.44 27.51 27.02 88.4 84.58 98.73 82.66 82.56 101.54 37.48 30.23 54.07 58.65