XLOC_039766 (gene) - C. hemisphaerica

Overview
NameXLOC_039766
Unique NameXLOC_039766
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_39:199434..209437+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039766 ID=XLOC_039766|Name=XLOC_039766|organism=Clytia hemisphaerica|type=gene|length=10004bp|location=Sequence derived from alignment at scaffold_39:199434..209437+ (Clytia hemisphaerica)
atttttcctctaCTCAACTTTTTGTAGAGGGATTACACTGGCATGGACAG GTCTGAATGACCACAAAGACAACACAATTGACGGAACGTTTGAATATTTA ACCGGTATCGACGGATTTGTCCCTTTATCACCTCTCCCATCAAACAGCAT TCTGAAAGATTGTGCTGCACTTCAGGTATatactaaaaaacttttttttt catttgcagTTTCTGTGAAGTCAAGCACTGTGGTGTGGGGGGCTACTCTT GAGTACCTAATAGTCGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNAAATTGATCGAAAAATTAATCATGGGGG GGGGGCTGCTGGAGACCAACTTTATGCTCCCCAGGGGGGCAGTGGGtatg acggtatgtgcggggaacagattggcttttagaatcgcacccttacagtg aagaagaaaatcggtgaaattcatacccttacagtgcattttttcaacaa tagagcaaaagaagcaaaatttttgagcaaaaatcggcaatttttcctag atttgctgaaatttccacccatacagtgcatttatcaaaagtctaCCCTT AAAATGcatttatgatattttgaaaaacatagcCTTAActgccgcacata cccgtcagtcaatttgcctgactgcccccgaGTCATACCATATCAGTTTT TACAGGAGTTTAAGGTCttcttacagtatatggcccccaaaacggagacg gcccccaaaacggaggttttcattgaaatgaagattctgacttgtagatt tatcagaatcttcatttcaatgaaaacctccgttttgggggccgtctccg ttttgggggccatctccgttttgggggccatctccgttttgggggccatc tccgttttgggggccatctccgttttgggggccatctccgttttgggggc catctccgttttgggggccatctccgttttgggggccatctccgttttgg gggccatctccgttttgggggccatctccgttttgggggccatctccgtt ttgggggccatctccgttttgggggccatctccgttttgggggccatctc cgttttgggggccatctccgttttgggggccatctccgttttgggggcca tctccgttttgggggccatctccgttttgggggccatctccgttttgggg gccatctccgttttgggggccatctccgttttgggggccatctccgtttt gggggccatctccgttttgggggccatctccgttttgggggccatctccg ttttgggggccatctccgttttgggggccatctccgttttgggggccatc tccgttttgggggccatctccgttttgggggccatctccgttttgggggc catctccgttttgggggccattagaaaaaagctacctatctttaagcgat tgaaaaatattgttgaaattgaaaattttgaaaaagaacttccaggaaat aaagtagagatgttaaaggttttcatgcagcaaaaatttttgtaaaatct cttttcctctagatttgagagaaatttcaaatttgatcgccgttttgggg gccacatataCTGTAGTCATTATAAAATACACTGATCTGGTAATCCACTG TTTTAGCTTTTTCgtcaaattttcatttgttgTAAATAAAAAGCAAGTTG CGATTTGGATCACATTATTATTTTCGACTCTTGGGATTGGTAAACAAATC CATTTAAGCTCTAACCCAgcttgcacacaacgttgtttcaacgtttatct aatgttcacaacgtccgtataacgttagatgaacgttgaaacaacgttgt atgtCAGCTGGGAACTGCTAAAAAATAGAGATAAACgaaagccttccaga ccggggtATTTTATAATGACAATCTGTTTAGACACGACCTGTTAATTTAA AAGCCTAAGATTtgtaagatttttaaattggccaACAATATATTATTTAA GTACAAGAAGATTTTTAGGTTTAGAACACCCAAAGGCCTCTTAACCTTTT GACGTTCTCAAAGGAACTGAAATTTTTACGCTTTTTACGTTTTCAGGttg gaaatgaaaataaattcgaAGTTCGCTCGTGTGGTGGGACAACAAAAATA TGGTCGATTTGCAAAATGAATTATTTCCGCCAATCCATTATCTTTGTACC AGCTGAAGTTCCACAAAGAGACGAATCTGACGGAGTATTAACCGAATTGA ATTGGTCAGATGCGGATCAAGAGTGCAAGAACAAAGGGGGAGAATTGATG AACATTTGTGGCATGAATAGTGTTATCTTACGTCGAATTTTACGCAAAAG GTATCAATAGATATCGTTTGTTTTCTAAAGTTTGCAGTCTTTTTTCCTAC CATGCAGAAACCACTCAAGGAAATTAGTCTAATAATAAGACTTCTGCTCA TACTCTAGCGAAACGAGTTTCTTATAGGAGCTATATCTATTGAGTTACAT TAAAAGTGAATTGGAAATACTTATCCACGCAATGTTATCCACAGTTCACA TCATTGGTATACATCCTGGTGCAAGACAAACTTTGTCGCCTAATTTAGGA AAAAAAACATCCCAATTCTTCGGTGTAAATACTTCAATTATCGGCTCAAG GATATAATTGCATAATTTTTCAATATTGCTAAGAATTCAGAATACGCTGT CTCAGTGTTACACTTCGTCGGCCTAGAAAACAAAAAGCGAAAACAACCGC AgcaccctcagccaaagtacaaCTGTCTCTTTACAAAATGTATGAATCTC AAACTTTTTGTACAGTTTTTCAACTTTCCCTATATTTGAATTTGCCTTGA TTGTTATTTTTTCAGGAATATCGATACTCCAGTTTGGATTGGAATGAATT ATGATACTTCAAAGAAGAAGTTCTTTTGGAGAAATGGAGTCTCAAAATTT AGGAGGTGGTGTCGTGGAGAGCCTTCATTAAACCCAGACCCTTTAGCACC TAACCAATGCGTGGCTTACATAGTTGGTGGAAAACCCCGTGGAAGAGGCA CCGGAAAAGGTTGCATTAGGGTGGAGCCATGTGGAACCACCATCGCACCC AATaagaaaatgtttgtttgtcaAATCAAAGAGTCAACAAATAACGATTT GGTGAACGATACCTTGAACGAAGTGGAAAAATAAAGGAATCATATCTTTG CTATGATTTTCAAATGATTTGGAgacttttaaacatttttagccgttttt tgtttcttttttataaacttGGCATGGACAGCAGTAGCGTGGTTAGACTA GAGTATACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGAATAGTG TTATCTTACGTCGAATTTTACGCAAAAGGTATCAATAGATAtcgtttttt ttctaaagtttgcaGTCTTTTTTCCTACCATGCAGAAACCACTCAAGGAA ATTAGTCTAATAATAAGACTTCTGCTCATACTCTAGCGAAACGAGTTTCT TATAGGAGCTATATCTATTGAGTTACATTAAAAGTGAATTGGAAATACTT ATCCACGCAATGTTATCCACAGTTCACATCATTGGTATACATCCTGGTGC ACGACAAACTTTGCCGCCTAATTTAGGAAAAAAAACATCCCAATTCTTCG GTGTAAATACTTCAATTATCGGCTCAAGGATATAATTGCATAGTTTTTCA ATATTGCTAAGAATTCAGAATACGCTGTCTCAGTGTTACACTTCGTCGGC CTAGAAAACAAAAAGCGAAAACAACCGCAgcaccctcagccaaagtacaa CTGTCTCTTTACAAAATGTATGAATCTCAAACTTTTTGTACAGTTTTTCA ACTTTCCCTATATTTGAATTTGCCTTGATTGTTATTTTTTCAGGAATATC GATACTCCAGTTTGGATTGGAATGAATTATGATACTTCAAAGAAGAAGTT CTTTTGGAGAAATggagtctcaaaatttaagaGGTGGTGTCGTGGAGAGC CTTCATTAAACCCAGACCCTTTAGCACCTAACCAATGCGTGGCTTACATA GTTGGTGGAAAACCCCGTGGAAGAGGCACCGGAAAAGGTTGCATTAGGGT GGAGCCATGTGGAACCACCATCGCACCCAATaagaaaatgtttgtttgtc aAATCAAAGAGTCAACAAATAACGATTTGGTGAACGATACCTTGAACGAA GTGGAAAAATAAAGGAATCATATCTTTGCTATGATTTTCAAATGATTTGG AgacttttaaacatttttagccgttttttgtttcttttttataaacttGG CATGGACAGCAGTAGCGTGGTTAGACTAGAGTATACTTTTGATTaaactt tttgatgattttgatggcgctgaatccagtgaagtagactagaggattTT GCCATCTTCAAtcttttcactttcattttcaaaaattatatgaaagtAAA TGAAANAATCAAATGATTTGGAgacttttaaacatttttagccgtttttt gtttcttttttataaacttGGCATGGACAGCAGTAGCGTGGTTAGACTAG AGTATACTTCTGATTAAACTTTTTGATGATATTTTGATGGCGCTGATGAA TCCAGTGAAGTAGAGGATTTTGacatcttcaattttttcactttcatttt caaaaattatatgaaagtttatgaaactaaaaaaaacaagaaaatacctc caaaatttgaaaaaattggtctattggttctttgtttgtttttctccaaa aagggactggatctagtggcatGTATTTGCTAACACatcaagcaaagcca aaatatgAGGCCTGCCAAATTACGCCGGgtcacttatcagcgccatccag tctatcaaaaagctatagtATAAGTGGCTCCCGGGCTATAGCGTGGGTCG ACCAAAGTTTGGGCAAACTTGGGagatgaatttcaaaatttgctgTTTTG GCGCTGATGATCGATTATTTGCGATATATCTTGTTATATCATATTTCAGA AATCAATGCTCAATAAATagttaataataaataaatagtaAAGAGAGACT TAAGATCGAAATAACACCTTAATCcttaacttgatttttcaacCCCCTCT GTTCTCTCAAAGAAGTTGATAACATTTCAGCATTTTCAACAGCTGCACCA ATGGAATAGTTACAAAAGCAATCATTGCGTACGCTTTTTAAAAGTGACCC TTACAGAACTAATCATAAAACAAATACCCTAATCCCATTAATTTTCGCGT GAATTAACTTCtgtttttcatgtattttttgCCCTCTTCACTTATATTTT TCATCGAAAATACTCAAAATAATATCCCAGATATTACAAGATGTGCGAAA ATAAGAGGCGTGAAAATAAAAGGAACGCAAAAATTAATGGGATTTATTTA AAACGAAAGTTTAACGACTTGATGTCTTCCTGCACGATTGGCAATCTTTT TTAATCTCACTTGTTTTCTGCAAGATAACCGAGATCAAATCACGTAACAT AGCTTTTTCTGTATAATCAGGTCCTCCAatctgacaaaaaaattgtttag gAACAAGGATAAGTGCCCCATCGTCTTGACGACCGCCACACAAATTAACT CCAAAACACCCTTGACCAGCAAGGAAGAATACACATTGGCCGCTTGGTTC GGGCGCGGGCGTTGTCGAACTTTCATCAATGGCGGGTTCATCAGTGCACC AGTTTGGAGTATACACAACAAATTTGATTGAAGATGATTTTGCTTTCAAT TGCTTTAGTTCCACTGCtacatttgtttatattttctttaatgAACAGAA TCGgaaagtacacttttttttataagaacatccaacattttttaagcctt cggatgttcttaactttttgggttttaagcttaaaaatgttcttaacatg ttcttattttcaccattttgtgaccatttttactttttacccattttcca aatttcaaccacTTTTCTTTTTCCGATGGCATCTTAACTTTAACTTCACC ATAACTTGAACAATACCCATAATGCTTATCTCTTGCTGACTCTTTACGAA AACCGTTCAAACAGTTTACACAATAGTGGTACGCTTCTTTGTGTTTACTA TTCATCAATCCTAACAGCCTAGATAAATTTTTCACCGCCGTATAATGTCT TTTTTCTCCCTCAACAATCATCAATAAATCGACCTGCTTGCTACGCTTAC TATTAAAATTAGACCTACTCGCAATATTTATACTCTTCTGATTAACAAAC ATTACGTTTACTGCGATCTCAGGATTATTCTTTTCAAACTTGCTAATCTT CCTATAATCCGTCGGAAAATCCAATCCCTCCCAATTATATCGCTCTACAT AAGGCTCTAATTTTGCAATACGCTCGGGATGAACATCAATTTCCTCATGA TGTAAAGCTGCTATCACAGCCCATTTAAAACACTCTTCATCCTTGTTTTT AGGATTTATAACCGCCTTCTTTGATGCTATCCAATCTGGCAATTCAATGT GTGAACCGCCTCGAGTCAGCTCCAATTGATGAAAATCAATATCTAAATGC ATAATATAATCAAGAGTAAAACCACTCTTAGGTAACGCAGGATGCTCAGT TTGAGTCTTAATATGAGCAAACATACTCTGTAAAATCTCTTCTACATTAC TACCTTGAAACACCTCTGTCATCTTACTGTTAAATACCTTATCCACTTTG ATCTCATGAGCGTTtttagtttgtttatatttttgcttATCATCCTCGCT CCAACCTTCCATATCTTCATCATCTAACCTCATAATTTGCTCTTCTTTCT TCCACATTATCCATATATGCATCTGAACTTTGGCTGCAACCAACACTTCC ACTTGCTCTTCAAtaagcttttgaattttaggCTTCACAAGAGCTATATA ACTATCAACATCTGTTTTTTCTTGTCCGCTTATCCTAAAACTCTTATATG CACCGTTCATCGCTTTCTTATGTTCTACAGGCATCAGACTTTtaacatct tcattttcatattctttTTCAGCCTCTTCTTCAACTTCTTCTAACAATgt ctttttacctttttcaTACAAACTCATAACACTATTTTTTACCTTTGAAA AAGCGTTCCCAACTGGCTCTTTAATTGATTTAGGCACGTAATTTATTAGC CAGTCGTACCACTCATTTAGCTTGCTCTTCACAACTGACCTATTTTTCAT CATCTCCTGCTGCTCAAAAATATCTATGCTTTCAGGCTTAGGTAACAATG TAACTTCGCGACGTGATTTCTTTTGACTAGGTCTTCTTGGTGGTCTTACT GGAGCTTCTAATAAAGAAACAAGCTCTCCCTTTCTAAGTTTGTAATATCC TCTTAAACCACGCTCTTTAGCAATGGCTCTTAATTCTTTAATCGTTTGAT TGTTCATATTTATTATagactttttagaatttaaaaaattctttaaagtg GTCGTAACTGAGACAGACATTTTTATTATAGATTCAACCTCCAACTAACA ACttttagggaatttcccttttcgatttttgaccactttacaaattttca aatcatcaaaatattcaacaaaatttgaaagttcattcctttcaaatttt taacAACTCAGCATTTTTTCAAATCGCGCGGATCATTTTTGTCGCGCGGA TCATTTTTGTCGCGCGGATCATTTTTGTCGCGCGGATCATTTTTGTCGCG CGGATCATTTTTGTCGCGCGGGCAAAAgtgtcgatgacgtcattgaatgg gaatttcccttttactcactttctgtacgggaatttcccttttactcact ttctgtatgTTCGTTCGCGTGCGTTCGCGTGTGCGTGTCCCAGAATCCCC CAacacaacctcgttccctgcgcatcaTCAGCTTTTTTNTGTCCCAGAAC CCGAGGTAAACCTGTACCCTCTTTAGTTTACTGAGAGCGTGATTTTATCG CTATTTTTTAGGATAATTTCACCCttttactcactttctgtatgTGCGTT TGTGTGCGTTCGCGTGCGCGTGTCCCAGAATCCCCCAACATATATCTCTT GAGGCGGGTCATTTCATCGACGATCCCATTTCCAATTATTCCGGTAGGCA GCATAAAAAGGTTTCTTTTCCATTTTACGCATTCCTCATACACTGAATTG ATGATTAGGGCTAGCTCGATAGAGGTGTGATCAACCCAGACTTGAAGCTC GTTCGATCTTTCGATTACAATTGACGTCATATCTTTTGGCGTCACCACAT TTTCAGTTGGCACTAGAGTGACTTCGCGTTTATTCAAACAAGTTTTTCGA TGTCTTGTTTTGCTTCCCTTGTTTCTAAAGGGGCAAATTGTTTCGCTGCT GTGTAAAATCTTCAAATCAATAAAATGGAATGTTTCCAGCGATTGACCGA CGTTGCAACCGTCCTGACAGCCTTAGGCTTAGGGCTGAAAATGAATGTAC CAGGAtatatttataataattacttggaaaaagaaaataaaataaaaaaa acagaaaacctgaaacgaaaaaaaaaaagtcaccAAAAGTTGGAGATCCT GAAGTGAGAAGAGCAGTTAAATCcatgaaaaaatctttgaaaaatgtgag tattttgaatttttttataattgacaatttttttaaaagagcaATTCTTA TCGAATTCTGGAGGATTAATTTGCACAATTCCGATAGCGAGGATGAAGAA ACCGAAGAAACTGTCGATTTTAATAGCACGAACGTCGAAATAAACATTGC CACGCCTAAACGCTACATCCCTAACTTTTCTAAAACGCACAAAACGACAT CCGCAACACACAAGGCACACAACCTCGAGTCTAAATCCGAATCTGATAAT GATACCAAATCCGACAGTGAGTCTGATCCTGACGTTCCCATGATCGAGGA AGAGCAACCAAAAGGTCCTGGGCAGTTTGCTTCATGGAGCAAGTCCATCA CCCTCATTTTCATCAATGAATACGAAAAGCATTAcgagaattttattttc atacagGACGATactgaaagaaacaagtttgGGAAATGATCCACCAGGGA AtaaaaagaaagattaaatCTGGAAATCCGGTACCATCAGCTACACAATG CAAAACAAAGTGGCGAACACTGACAAAAGCGTACAATgggtatttttttt tacttattatCTTAGGGGTACCAACGCAAGTGGGAGATACATGTGTATGT ACTGCCCGAAATCcagtatattttttataagcctACAAAATTCGGAAAAA CAAAATTCGGAAAAACTAAATTCGGAAAAACTAAATTCGGANAATCCAGT GAAGTAGAGGATTTTGacatcttcaattttttcactttcattttcaaaaa ttatatgaaagtttatgaaactaaaaaaaacaagaaaatacctccaaaat ttgaaaaaattggtctattggttctttgtttgtttttctccaaaaaggga ctggatctagtggcatGTATTTGCTACCACatcaagcaaagccaaaatat gAAGCCTGCCAAATTACGCCGGgtcacttatcagcgccatccagtctatc aaaaagctatagtATAAGTGGCTCCCGGGCTATAGCGTGGGTCGACCAAA GTTTGGGCAAACTTGGGagatgaatttcaaaatttgctgTTTTGGCGCTG ATGATCGATTATTTGCGATATATCTTGTTATATCATATTTCAGAAATCAA TGCTCAATAAATagttaataataaataaatagtaAAGAGAGACTTAAGAT CGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063446TCONS_00063446Clytia hemisphaericatranscript
TCONS_00063447TCONS_00063447Clytia hemisphaericatranscript
TCONS_00063448TCONS_00063448Clytia hemisphaericatranscript
TCONS_00063449TCONS_00063449Clytia hemisphaericatranscript
TCONS_00063450TCONS_00063450Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063447-proteinTCONS_00063447-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_39supercontigscaffold_39:199434..209437 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.3 0.21 0.32 0.21 0.49 0.56 5.09 5.46 77.94 52.72 59.58 97.1 33.56 44.25 15.94 12.35 2.93 2.6 50.48 40.85 0.48 0.87 0.32 0.25 0.54 0.42 0.34 0.33 0.21 0.12