XLOC_039710 (gene) - C. hemisphaerica

Overview
NameXLOC_039710
Unique NameXLOC_039710
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_387:21965..28621+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039710 ID=XLOC_039710|Name=XLOC_039710|organism=Clytia hemisphaerica|type=gene|length=6657bp|location=Sequence derived from alignment at scaffold_387:21965..28621+ (Clytia hemisphaerica)
CAGAAAAGTGTTTAATCAAGACTACATATTTTTACTTCAACAAACTGGCT ATAACAGCTATAACGATTTGATTAATTTAAAGGAGAATTAATGCCTGGAT GATGGAAAAAGGTGATAGGAAAAGAGCTTTTTCAAATTTTTTGGAGTGCA ATCCGCAGAAGACATTAAATGGATTAAACAGCAAATTAGTTAGAATCACT CCATCATCATCTCCATCATCAGTATCGGAAACAACAACATCCCCATCGTG TTCTGGTGAAGAAGAAAAAAGTACAAGACCTGCTGATAGCAAATCTGCTA GTAGTTACAACAAAGACAAAAATCTGAATGATGATGATGCTGATAGTGTA TGTTTCTCATTGGAACAAGTCCCACCCACAAACCAAATTGAAGAAAGTAG AGAGGAGGAACAGAAACAACACTTATCTAACGAACCTTCGTCAGTCTCAT CTACCAATCCATTATCAATATGGTCAAAAGATATTTATACCGTGAATGAT CAGACATTGGATGAATACAATAACAAGACCTTTCATAGTAAGTGTAGTTC TAAAATTAAATTATCACATATACAATACAATATGTATTATCTTTGTGATC TTAAACGTAAAATATACAGATATAAATAGTAGGTATTGAAAGATAATAAT ATTAAAACTTAAGCATAAGCCTGCTGCAAAGTGTTTGTTTTTTATATTCT TTTCTTAAATTGAAGCCAGAAATCCTAAGCCTAAGTAATGTGTCCTTGAT GTTTTTATACTGAAGAAGAAGTAATTTTTCGACAACAAAATCATAAAGCA AAAAGGAAAGACACATTACTTTAATTTCTTACCATCAACAGCTGAAACTT TTATCCTTTCCCTGCCAAACATTAGAACTTTATTATCTCCATAATTTTTT AGTAGAAAAAATTTATCCCATTTAAATTAAAAATGTAAAATATTATTTTC TCTTCAACAGATTTTACTTTTGACGAACAAGATGACGCATATGATAACGA TGATTTTGATGAATTTTTTGAGAGCCAACAAATAACAGTGGATGAACCAA TTTGCAAGGGAACTAATATGACCCTTCAAAATTCTTTGTTGCTTCATCTT GCTTTTGCTAGGAGACATAATTTGACTAAAGCTGCTCTAAAAGATTTACT TCACCTTACCAGTCTTCACCTTCGCAAGCCGAATAAATTTCCTCAAAGTA TTCAACAGCTTCATGCAAGTCTTGCATCACAAGAAAGCGATATTACAAAA TGTTTCTATTGTAAAAACTGTTATTGCAACATTGAAGATAAAGATCAAGT TACGTGTGATAGTTTTGGCTACAAGGAATTTGGCCATTTCATAATCAACT CGATAGAAAATCAACTCAGTAAAATTTGCAAAAGTATGATCATCAAATTA TATCTTAATTCAAAATCTGTTCCTAAATTACTTGTCCACTCTATTAAGGT TTTGTCCTTTATTTTTATATGAGCTTTTGACAACTTGTTTTTTAGCATTT AAGTATTTGTTTGATCAAATGTTGTTAATTTTTAAATCCCAATAGGACCA GGATTCAAGGAATGCTTGATAAAACCAGCCTTAAATACAACGTCTGTTCT GAAAGATGTCGGCGATGCAAGAACATACCAAGAGCTAATCAAGCAGGGGT ATTTCAAACAAGATGGACTCAATCTAACATGTCAAATGAATACAGATGGA GTTAGCCTCTTTAACAGCAGTTCCTTTTCTGTTTGGCCTGTTTATCTTAA AATCAATGAACTACCACCATTGTTCAGGTAAAAACTTTTTTATAAATTTT TTTACTGAATGATCAGAAAGGGGTTGGATTTGAAGGTTGTGTGGATGTTG TAATTACTATGTGTCTTCTAAGCCAATAGATTAGATATCTTGAATTGGGA ATTGAAATTATTTTTATTGTTTTTAAGCATTCTAAAATTGAAACTTTTAG GAAAACCAAAAAGAATAGAATCATTGCTGGTTTGTGGTTTGGCTATGAAA AACCATTTATGAGAACATTCCTTCGCCCTATTGTAGAAAGTCTGAAATCT CTAGCTGTTGAAGGTAAATCAAAATAGACTTTCATATATCGTGTAAAACC ACTTTGAAAATTGTGGAGCGGGCCCTGTACACTATTATGTATTTTTTTGT TGAATGTTTTATGATAACATGAAATAAATAATAAATTAATTTGTAATAAT ACCCATTTTTTAGGAACTTCTATGGAATATTTTAATGGCCAAAAAGAGAT TGTCAGAATATTAGTTATTGGAGGACTGTTTGATCTTCCAGGTATGAAAA TTTATACAGGAATAGATAGTAAATTCATTTATCCTTTATAATCTTGATAT AATAATTGATTATCATGACAGTGTCTTTGCCACTGAAGGGCTGATAAAAA AACAAGGATAGAATGAACAAACCAGCGAAATAAACAAACGAAAACTGAAT GCTTTTATCACTATTTTAATCCACAGTATGTTAATCTATGAGCCAATCAA AACATTTTGTTTTAACATTGAGCTAGCATGAACTATAAATTTCATTTATT TTATTCTAGCTAAGTGCTTGGTGCAAGAAACAGTCCAGTTCAATGGATAT TTTGGGTGCAGTTGTTGCGAAATCAAGGGTCAAAATGTGTCAACTTCCAA AAATGGTTCAAAAATTGCTTTCCCGTTCGAGGAAGAAGTGAAGTAAAGGG ACTGGAAAAGGACCCTTGCTCAAGCCTCTGTTGCTCTTGAATCTCAAACC ACAGTATGACTTTTCTTTGTATTATACTGTATATATATTAGCTTCTTGCT TATTAAAATGTAAGCACTTGTATATTTAAAATACTAAAAACTTTTGCTTT ATGAAATTACCCCAAACTCTTTATTTTTTCAGGTTAATGGTGTTCGAGGA TATTCAATATTGGGTGAACTACCTTTTGTCGATGTCATTTGGAACATTCC ATTTGACTACATGCATGGTACCTTTCTTGGAGTTGCTAGGTTAGTTATGC CATCTGtcttataattttttctaaCTTTATAAATGTTTGAAGAATTATTA TTCCTTCCATTCCAACTTGTGTGTATTTAATTACTTGGTCTATTTCAAAc cgttttaattttttagatcGCTCACAAGACTTTGGTTTGATACTTCTCAC TCTAAAGAAGAATGGTATCTGGGGAAATACATCAACACACTTGATCAAAA GCTACTGAAAGTCCAGCCTCCTGATGAAATTTCACGCCTCCCTCGAAGTC TTTCCCATCGCAATTACTATAAAGGTACACATATTGTGCTTactcaaaaa aaattagaaagctATGCACAAGTTTTAAACAATTTCTTTAGCACCTTTCT AGTAACTGTGAGCATAACATAGATTAAAGTAAACAGACATCTGTAGCACT TGTTTTGTTATTTTAGCTAATGAATACAGAAATTGGGTGATGTACTACAG CCCAATCCTATTGAAAGGTTATCTGCCTGACAAATTTTACAGGTAAGGAA ATAAAATTTACTACGTAGGTATTTATTATGCATGAAAGTTTTAATGCTTC TAATATTTTTACCTTGAAAGATCATTCTGTTTATGCCTTGTGAAACGATC AATTACAAGAAATGTCAgatttatttttccaaaagattAATGGTATTGTT TTCATACATTTCAGTCACTACTTGCTTCTGGTAAATGGTATTTTCCTTCT CCAAAAAGAAGAAGTCAGTTATTCTGAAATAGATCTTGCCGAAGAACACC TGCATTTGTTTTGGGGCAGAATGGATTTGTTNTTTTCCTTCTCCAAAAAG AAGAAGTCAGTTATTCTGAAATAGATCTTGCCGAAGAACACCTGCATTTG TTTTGGGGCAGAATGGATTTGTTATATGGTAGTTAtcatattttcaacat ttttgtaatCTATAAGCCTATACACTTTGAACATGTGGTCTGAATCGAAA AATTAGTCTCTACCACTGTTAAAGGCAAGATTTTAAGTATATactaaaaa ttagatttttactaaaaattcNAAAAATTAGCCTCTACCACTGTTAAAGG CAAGATTTTAAAGTATATActaaaaattagattttaaattttttattcta GGAACAGGGGAATGCAAAGCAAACACTCACAATGTATCCCATTATGGAGA ACAAGTCCGAATCAATGGACCCCTATGGGCATCAATGTCTGGATTCAACT ATGAGAATTGGAATTCAGACTTTAAGTATCTATTTCATGGAACACAACAT GTTGAGCAACAGGTTAGGGAACAACAGTGTATGTAACAGTGGcatttttc atatcaaaaatattcatgagCTTTTTGAATTTAGAGGATGATATCTGGAT TTATTTGGATTCGTTTATTGATACAAAGATaacaaacaaagaaatatcaa tttttatttcagatATTTTCTAAAGATATATTTTCCTTAACAGGTTATTC AGGCAGTGAATATGGATATGAGACTTGTGGAATGGGGATCCAATGTGTCA AGTTTCACACCAGAGGGAGAGTTCTTTCATAAATTGTGTGGAAACAAGTA AGATTTCTCTCATCTCTCTATAGTTATTTTGGATGATGTCCTTAAAACAT TTCTAATCTTCTCTCTGAATTCCTACAAaatgtatttattttatttttca aatttaggaaTATTTCAAATACTTCGAAAAACTGCTTCGGACCATTCATG AAAGTAAAACCTGAATCTGTGCTTTCATTTGAATGTGAAACTTGTGTCTC GAGCATGATTCAATGGTATGTGTaactgtattttcattttctttttattc aactttctatttttcaaacaaattttccTTAACTTTTCTTTCTCTGTTTC ATTACCAGGGATGAATTActtgaatttcaaaagattaAATTTGGGAATTC ATACATCAAATCTGAGAAGTATGGAAGATCCTCAGCAAGGAAAAATAGCG CTGTGATTGTTAATTATCAAAAGCAAACTTTGCCAGGATTGGTCTTATTT TTCATGAAGGTACGAATAGTTTCATCAGATGGTAATTGATTTATACTAAT GAAATTGGTAAACAATTAAGGtggatgtttttaaaaatgtccTAGTGGGT CAAAAAGTACTTATGAAGGTGAATTGACAGAAGAATTAATAAATCGTTAA TTACTTATTAGGGGAAAGATGAGAATGTAACCCTTGCAGTAGTTGAGGTT TtaaaagaaatggaaagtgaTATATGTGGTGTTATGGACAAGAAAATTAT CTCACTTAGTCATATCAAGGCTTTTAAAAGGTATAACGTTTGATGTGACT AATTATAGGttccaatattttaaaaaattaagagaaattcaaattcagta cTTTGTTGTGAACTCTTTTTAATGTCAAAAACGACAAGTTGCATGTTTAT ATTTACCTAATACCATTNGAGACTTGTGGAATGGGGATCCAATGTGTCAA GTTTCACACCAGAGGGAGAGTTCTTTCATAAATTGTGTGGAAACAAGTAA GATTTCTCTCATCTCTCTATAGTTATTTTGGATGATGTCCTTAAAACATT TCTAATCTTCTCTCTGAATTCCTACAAaatgtatttattttatttttcaa atttaggaaTATTTCAAATACTTCGAAAAACTGCTTCGGACCATTCATGA AAGTAAAACCTGAATCTGTGCTTTCATTTGAATGTGAAACTTGTGTCTCG AGCATGATTCAATGGTATGTGTaactgtattttcattttctttttattca actttctatttttcaaacaaattttccTTAACTTTTCTTTCTCTGTTTCA TTACCAGGGATGAATTActtgaatttcaaaagattaAATTTGGGAATTCA TACATCAAATCTGAGAAGTATGGAAGATCCTCAGCAAGGAAAAATAGCGC TGTGATTGTTAATTATCAAAAGCAAACTTTGCCAGGATTGGTCTTATTTT TCATGAAGGTACGAATAGTTTCATCAGATGGTAATTGATTTATACTAATG AAATTGGTAAACAATTAAGGtggatgtttttaaaaatgtccTAGTGGGTC AAAAAGTACTTATGAAGGTGAATTGACAGAAGAATTAATAAATCGTTAAT TACTTATTAGGGGAAAGATGAGAATGTAACCCTTGCAGTAGTTGAGGTTT taaaagaaatggaaagtgaTATATGTGGTGTTATGGACAAGAAAATTATC TCACTTAGTCATATCAAGGCTTTTAAAAGGTATAACGTTTGATGTGACTA ATTATAGcttctaattttttaaaaaattaagagaaattcaaattcagtac TTTGTTGTGAACTCTTTTTAATGTCAAAAACGACAAGTTGTGTTTATATT TACCTAATACTTAGAAccgagaagaaaattattgtAAAAACAGAATCAAT CAATGAAAAGAAGGTTTGTGTAGAACAAAGAAAAACTTATTATTTTATTG ACTTTGTAAATAGGTTTGAAAGTGACTAGTTATGGTTACAGAGaaagata atattttttataacttaTATTAATTTCAAATCGTACTTTATAGATCTAAG TGGTTATACTTTATCCGTACCAATTTCTGTGTGTATCTTATTTTGCGTAT CTAGATGTAATTTTTCGCACATATTTTTTGTGCACAAaccaaaaccttca ttccaaG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063371TCONS_00063371Clytia hemisphaericatranscript
TCONS_00063372TCONS_00063372Clytia hemisphaericatranscript
TCONS_00063373TCONS_00063373Clytia hemisphaericatranscript
TCONS_00063374TCONS_00063374Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063373-proteinTCONS_00063373-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_387supercontigscaffold_387:21965..28621 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.04 0 0 0 0.08 0.07 0.06 0.13 0.09 0.16 0.02 0.09 0.11 0.16 0.01 0.07 0 0.02 0 0 0.02 0.05 0 0.04 0.09 0.21 0 0.03 0.07 0.02