XLOC_039601 (gene) - C. hemisphaerica

Overview
NameXLOC_039601
Unique NameXLOC_039601
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_384:366562..376309-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039601 ID=XLOC_039601|Name=XLOC_039601|organism=Clytia hemisphaerica|type=gene|length=9748bp|location=Sequence derived from alignment at scaffold_384:366562..376309- (Clytia hemisphaerica)
CCCCCCCCCCTTGAACCGCCGTCCCGCAACTAATTAGACGAATATTTAAC AAAAACAATTTATGATCTTATTCCTATTTTAATGAGACATGAATTATGAC GGTTTTAGTTTGCAGTAAAAAGTAACCGTTCTTATTCATGACCAATAGTA GAATCCTTTATATTTGGAGTAGAAGGCGCCCCACACTCGCGCCTTGGCAT GACCCAAAAATTGGGTCAGGCTGGTCCACCACACCAACAGAACGTTACCT TTGAATTACGATACTCGGTTTACTATAATCGATTCAGTCAACTCCATGAA CAATTGAAACAAAACCCCACTCCCCCAAAATATTTGGATGCTGGATCAAA GTAACAAGCTGCAACTCTGATCTTCTGTTGACTGTATATTACATCAATAA ATATGAACGAAAAGATAAATTTCAACCACTCCCAAAAAAATTGACAACTG GATCAAACAGGCTGTCTTCTGTTGACTGTACATGAATTAATACGAACGAA AAGATAAATTTCAACCACTCCCAAAAAATTTGACAACTGGATCAAACAAG CTGTCTTCTGTTGACTGTACATGAATTAATACGAACGAAAAAGATAAGAT TTAACCACTCCCCGAAATATTCGATTACTGGTTTGAAGTAGTGAGATTTA ATTATGAACACTAACTATGTTTGATTAAAACAAAAATTCCAAAAGACTAA TATTAACCTGAAAACCGCTACTATATACAAAATAATCAAAATCCAAAGTG ATGCGGGATTGTCATCTGAAAACAGAATAATTCAAAGGTAACATTCCGTC CTACTGGTGGTCCCGAGTTAACAAGATTATGTACCTTTGATTCTATGAAT TGGAATTATGCACCTTTTTCAAATCTGCGGTGGTAATTCAGACTCTTCGG ATAAAAAACTCGTTTACCCAATGAAACAGGCATGTTTTAACCGCTTTAGT TGCGTAAGCCAATTATGAGAAAAAACCGTGGAGCCCACTTCAATTTCATA GAATCTTAATAATTTGCATCTCATCATTCAATATTGTACTCCATCTAACT CCTCCAAAACTGGTATCCTCGCCACACACGAACTCTGCAATCAAACCGTT ATAAAAAGTAAAAGAAAGGATCAAGTCACGCAAGACCAAAGATCTATAAA CAAGATAAAAAACCACGACCGCCTTCCATGATGAGAAAGACTGTCGTCAC CCATCCCAAAAAATCAAAATTTCAATCCAACCACCAACAAACAAAAGAAA GTAACACCAAAATGCCAGCCCGGAACACAAAAACTGTCAATATATTCAGG AACGGCTGTAGCTGCCAGGTCATTCAGGAACACCATATTTGCCAGCACAA CCAATTCAGGAACGCCATAGTTGCCAGCACAACCAATTCAGGAACACCAT AGTTGCCAGCTCATTCAGTAACAAAACTGCAACCTCATCCATAAAAACTA ACTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNGTCGTCACCCATCCCAAAAAATCAAAATTTCAATCCAACCACCAA CAAACAAAAGAAAAGTAACACCAAAATGCCAGCCCGGAACACAAAAACTG TCAATATATTCAGGAACGGCGTAGCTGCCAGGTCATTCAGGAACACCATA GTTGCCAGCACAACCAATTCAGGAACACCATAGTTGCCAGCTCATTCAGT AACAAAACTGCAACCTCATCCATAAAAACTAACTGTCAGCCACCCGCAAA TAACAAAAATGTAATCCCATCTAGCAGCACTGAAACCCCCACCCACCTGC AAACAACTAAATTGCAAGCCAGCCCCATCTAGCAGCACTGAAATTGTCGG CCACCCACAAACAGCAATACTGGAACCCCATCTGGCAACACTGAAACTAT CGCCCACCCGCAAACAGCAATGCTGGAACTCCCCATCTAGCAGCACTGAA AATGTCAGCCACCCGCAAACAGCAATGATGGAACCCCATCTGGCAACACT GAAACTATAACCCACCAACAAACAACAAAACTGCAACTCCATCTGGAAAA ACCAAACCATTACCAATCTACAAAAAAATCGAACTGTACACCAACCCAGG AAAAGTAAAGNTTGAAAGCGATTTTTGAACTTTGTAGCAAATCTCCAGCG TTCTAATATCGGAGGAAAGTTAAAGGTGCTCTCGATAGTCGGTCGTTATA TGTTTATTCCCACTCCAGTTGCCAGAGAACCCAGATGATCGATAGCTGAA AGGTAAAAAAAAAATGAATCAACATTCTGCCCACAATTTCTTTACTTACA CTCAAGATTCCAGAAGAGAGAAATCGTACCAACTTTTATGCCATAAAACC GCGAAGTTTACAATAAAATTTCGCGAATTAAAAACTAACAAAAATTATTT TAAAAGCCACTTACTAAAGATAACTGATAGAATCTTGCCACATACGGGTA TTGTACAGCCAGAAGCTTAAAGAAAAGAAAAGCAAAATAGAGTACACACA CTCAGGCACAATGAATTAAGCCGAAGGCTAGAAACGAATCTTCCAAAGTT GCGCGACCCACATGGTTATCATACAAATGCAAAGATTGAAAAAAGCGTTT ACCGCTAGATTTTGAAAATATGACAGTTCGGAAAAAATATCATTTCTATT CAATTCTTCATCCGTTATTTGGTGAAAATTGTTGAAGCATCACTTGGTTT TGTCCGGGAAAGACTTGAGATTCACTTCTAGCCCTTCGGGCTTTAAATTC AGGCTTACTTTCAGCGTAAAATTCTGAGAGCAAGAGATAGAAAAGGGGAA CAAATCGAAAACTCTTGAATTCGAGGAGAACACATTGTAAAGACGTTCTT AAAAAGCTGTGTCGGAATTTACGGACGGAAATTTAGGTACAAATTGACGC ACGGAATCAGGGAACCCATTCCACCCCCCNATCGTGTTTTCTTAAATGTT TTGGTCTACTTGATCATAAATACTGAACAAATTTTAGTATCTGAATTATC ATTGAGAACAACTGGAAAATGTGAAAAAGACCTTCTATTAATGCAAGTCG AAAGATGTGCTCTCATGGTAAACTGGTTATAAATGATTTTTTCAGGGGAT CTCCCACTGGCAATATCGAAAGCATAAGCAATGACGAAAATACCACAATC TGTTGAACCAGCCTGTTTTGAAACTGGTTTATATTGAAGTTTTAACTGAC CATCTTTCATAAAGTTTTTATAGCATAGCAATAACTGTAGTTTCAAATCA TCATAAGGTAGGTTCATCATAAAGGCTATCGTATACAAAAACGTTGCCCT CTTTTGACGATGAAAAAACCCAGTGGCAACCACCAGCATGATGAACTTGG ATGCTATCAACCTCGAAATCTACTGCTTTGAACTTTGACAATTGACTTTT GGATTTCAAAGTTTCTTGGAGCCCTTGAAGATGAGGAAATTGTGTTTTCA ATATATCAGTAGCTTTCTTGACAATAACACCACTAACCCATTCACCGTTC CTTAACTTTTTCATGGCATCCTGAAAGATCTTTTCGTCGCTACGGTCAGC ACTTCTCTCTTCAGTGTCAGAAGAAATTACAACATCGACATCAACCGCAG CAGAACCTTCCTTTTTATTCAAAGACAGTGTTTTATCAAATGAAAATGCC TTAAGTATGGATTTCGACTTTGCAGAAACAGAGACAGGTTGCTTCGTTCG CTTTCTTTTAGAAGGGATTGGTGTCAGGGTTGGATTAGATGATTTTCGCT TTGCAGAAGAAGAGGTTTGATGAGAAGACTTTCCGTCTTTCAAAGCGAAC TCCATAAAAGATGAGTTTTGAGAGGCAAATACCTTTTCGCTACATTTGAA GCCCATTCTCTTACTAAAGTGGATTTTACGATCAAAACAAGATTGGTTGA GCCACACTGGAGAGTCTTCTTTCCCCTTGAATTTCACAAGATACAAATAC TCTTCACTTTTTGGATCTATCTTCTTATCAATGATATCCTCTACCTCGTA AAATTCTGCAGGTAGCAGGTTTTTCGAAACACTTTGAGCAAATTTACGAT CAGCAGCTTCCTTGAGAGTTTGTTCAGCCTCTTCCAAAACACTAAGCGAT TTTTCCAGTATACTAAATTGGTTGGATTTGTTACAAGACATTTTGACTTC TCCTAAAATATTGCAAACATTTATCCAACTGCTAACAAGGATTTTCTGAG GCAACACATACAAATTTTGTTCCGACTTTTTAAGAGGAATGAGTTGGCAT GTTACACCGTAATCCAAATTAGAAGCACTCTTGACACTTTTGCCACTCGA ATTTAAAGCTGCGACTTTGCAAATGGTGATCTTTCCTGAAATCTTTGCAA CAACAAACCTGAAAAGAATGACATTGTGACTTTCATTTATCTCTTTTCTA TCTGGAAGAAACTTCGATGCAATGTGCCTACGTGAACGTTCTCTTGAAAC AAACTCTCTTGGGATCAGCAATTTCAAAGCCTGTGCCAGATGAATCTCTT TCTTTTCTCCATTGATTATTTTTGAAAGAAACCACTTTCGTCCTTCGGAA TTTACACCTTCGGTCTTGTCATCATTTGACTCAAGATCGGTCAACATCTC GTCAGGGATCAATTCTTCATCTTTGACATTGTCACTGTCTTTATCTGAGT CCCAAATCTTACCAATATCTTCAGGATTGAGATATTTAGTGATAAGATTT TCTTCACTCACAGCATCCTCAACAAAAAGTTCTGCAGGATTCATCTTCAA TTTCTCCATGGCGTATTCCTCACTTACAGAGCCATCAAACATGTTTTTCT TTGGAACTCCATTCTTAAACTCAGTCAAAAAACTCAGACTAACCTTCTTT TCCTTCAAAAATTTCAAACCTTCCTTGCAATATTCTCTATACAAGTCGAT ACCCTTATCAACACCCTTTTTGAAGGCAATCGTCAGCTGCTTCTGAAAAT CAGCATAAGACTCGGGATACATATAATCAGATTTGGCTGCCTTTACAAGC TTGTCTGATAGTCTTCTCCTGTTTGTTGAACTTTGTTTTTTTCCTCCAGC CGCTATTATGTTATCCAAGGCAGTATGATTAGTTTGCACCTTTGAAATCT TACTCATGATTCCTGCTAATGTCGGCTGTGCATCTAAAGATTGCAACTGG TTTGTTTTTCCTTGAACCTCGCTTATGATCCTCTCAGTAGTTTTGGTGCC ACAATTGGAAAGGGGGAGCATCGATGTGCCCTTATCTTTAAAATGAGCAA ACATGGCTAACATGTGACACGTGCCAGCAGCGAATAAAATTTCAGCAGTT TTGAAACATCCATAAGTGAGAAAACTACCCCGTTTAGAAGCATTTTTAGC TGCCCCTGCAACAGCGCTCAATCTCTTACCTTTAAGCTGCAATATTTTCC TCCAGATTCTAAAAATAGTTATTCCCTCTGACAAACTTTCCATTATTGAA ATAGGGTCACATTCTGGAAAAAGAAATGGTCTGAACAGAGCTACCACACC TTTGATGTATAAAGATGTCCCACTTGAGCCTGGAACATGCTCCCGCAAAA GATCTGCAATTCTATTGGTGAACACCTTCAAAGCAGCATCACAATTTTGA TCAAGGAAGCGAGCAAAAAGCAGATCATTGTTTGAAAAGGTGCAAAGATG ACCATTACCAGAATCATCAAGAATGATCTTCAGTTCTTGAAGATGATTAA TGGATGCAATGTGAGTATTAGATGAATTTGGAAATAAGTTGAGATCTAAT GTCTCGTACTTCAAACATTTGAGGAAAAGGCGAAGATTGTGGTCATAATC CAAGTAAGCAATCGAAGGTAAAGGACCAAAATATGGGGCAGCATACTGGC TTGCTCCAGCATCCAAAGTCAAATACTTGACGTCTTTTTGGAAAGCTTTA GTTAAAGGTGTCATTAAAGTGACAGCTGCAGCTAATTGAAAGCCGGCAGA ATCCGAGGCATGACCGACAAGATTGATCGGTTTTTTTCGCCACTCTCCAG ATGGTGATAAAAAGCATTTTTGTCTAACAANATTTGTTTTTTTTCCTCCA GCCGCTATTATGTTACCAAGGCAGTATGATTAGTTTGCACCTTTGAAATC TTACTCATGATTCCTGCTAATGTCGGCTGTGCATCTAAAGATTGCAACTG GTTTGTTTTTCCTTGAACCTCGCTTATGATCCTCTCAGTAGTTTTGGTGC CACAATTGGAAAGGGGGAGCATCGATGTGCCCTTATCTTTAAAATGAGCA AACATGGCTAACATGTGACACGTGCCAGCAGCGAATAAAATTTCAGCAGT TTTGAAACATCCATAAGTGAGAAAACTACCCCGTTTAGAAGCATTTTTTG CTGCCCCTGCAACAGCGCTCAATCTCTTACCTTTAAGCTGCAATATTTTC CTCCAGATTCTAAAAATAGTTATTCCCTCTGACAAACTTTCCATTATTGA AATAGGGTCACATTCTGGAAAAAGAAATGGTCTGAACAGAGCTACCACAC CTTTGATGTATAAAGATGTCCCACTTGAGCCTGGAACATGCTCCCGCAAA AGATCTGCAATTCTATTGGTGAACACCTTCAAAGCAGCATCACAATTTTG ATCAAGGAAGCGAGCAAAAAGCAGATCATTGTTTGAAAAGGTGCAAAGAT GACCATTACCAGAATCATCAAGAATGATCTTCAGTTCTTGAAGATGATTA ATGGATGCAATGTGAGTATTAGATGAATTTGGAAATAAGTTGAGATCTAA TGTCTCGTACTTCAAACATTTGAGGAAAAGGCGAAGATTGTGGTCATAAT CCAAGTAAGCAATCGAAGGTAAAGGACCAAAATATGGGGCAGCATACTGG CTTGCTCCAGCATCCAAAGTCAAATACTTGATGTCTTTTTGGAAAGCTTT AGTTAAAGGTGTCATTAAAGTGACAGCTGCAGCTAATTGAAAGCCGGCAG AATCCGAGGCATGACCGACAAGATTGATCGGTTTTTTTCGCAACTCTCCA GATGATGATAAAAAGCATTTTTGTCTAACAACATCCCAAATTTTCAAAAG ATGCACAGAACGGTAACCTGAATTGGCAGTGGGCCAGATTAGATATATCA AAGGTTTAGACTCTACTCCTGATGCAGAAAGTAAATTGTGTATCTTTAGC CAGTTGATTTTGCTTGATTGTTTTTGTGACATAATTTTCTAGAGCAGAAA ACTCATCTACAAATCCTTCTTTCTTGACAATATCCTCCAAAAAGACTCTC GAATTCTCCCACTTGCTGATATCTGGATCCCAACATTCACCAATGATTTT GATCCTTTCATCCTTCCCAACAACAGCAGTGAGAAACCTCAAAGTTCTTG CTTCATCTGTGGCATCAACAACCGGTCCCCCATCGTACAACACCGTGCCA TTTTCAAACACCTTCTCATTTAACCCCAGACAAAGTTGAGTCTGCTTCCC GTGAGACTTGGCTAATGTTTTACCCGGTAAACCAAATAGATCCTGAAGTA AGCTGTACTTATTGGGGCCTAAAGAATTGTGAAAAAACGTAGCAATATCT TTAATTACTGGTTTGAATTTGTGATTAACCCCAGATTTCAGTTTCCCTAA AACATTTGTGATGATTTCTTTTTTTATTGTTTGGTTGATGCTTTGCTTGA GTAAGAATACAAGGTCTAGAACTAGCTTTTTAACGTCGTCATTTTCGCAA CTTTCAAGTAAAAGTTTTTGCCAGTTTGTTTTACTGTAAATCATTCTTCT GTATTCTTTGTTTTCTTTCACTAACGCTTCATTCCTTTGAAAGGTTTCAT GAAAGTGTTTTTCCTTTTCACTTTTAGTGTAATAATCTTTTCTCATGCCT TTTTTCCCAACCCTTGATTCACTTGTAGGAAGTGAGGCTTTATTTTCACG ACTTTTCAATACTTTGTTGAGATCTTTTAGCTGTCGATGGCAATTCTGAC AAGTGTAAGGGTGTGGGCCAATATTTACTGCAGATCCTAAGCATGGAGGA TCAAGTGATTTTATACCGCCTTTAATTGTGACCGTCTCACCTTGAATTAG TATTTTCTGGTTGTTTGCTGGGACAAAAACAGATCTGCCAGATCGAAATT CAAGTTCCCTGCATAATTTAGCATGCTCTTCCGAGTGATTTTTTTTCCAG TTTGCAAATATATTACAGTCTTGATGATGAGCTTCACAATTTTTCCACAA TTTCTGTTCTTTGAAAAAGGTCTTAGGTGATTTGCGCCTTATTGACTGAT CGTCTTCAAATGTAGTAACTATTTTTTGGTCCCAAACAAACAAACATACA AGGAACTTGTTTACCCTTTTCTGATATCAAATCTTTAAAGTAGTTGGAAA CATGTTTTTTAGATTGTTGATGCGTGATAACTTTTACTGATTCTTTTGAT TGACTTTTCAAAAATTCAATTGCGTTAATTGTTTGCATTTCCATGTTCGT ACAGTTGGCGACAGCCTTCCAGTTTCCCTAAGCCTGTTTGACAGCCTTTG CCAGTTGTTTTCAGGTAAAAAGAGTACAATTCACACACTTCACACTTAAA CAACAGTTTTGAAGCACAGCTCAGAGAAGAAAATTGTGGTATTGGAGTAC CAGGTTCAATATAATCAATAAATTGTTTTACAAGATTTCCTGCTGGGATT GGTGGAAAAGAAGCACATAAAAAAACGTTCATTTTTAACTCTAGAAAACC TTTATAAGATTTTGCCCTGTCTATTATATTTGCCATTTTCTCTTTTTCGC AACCAGATATCGGAAATTTTGCATCAAGGAATTTTTCAGAGCTATCAAAT TGGCATGATGGTAGGTTAGAAGGCGTAATTGTTTTGTAATTCTCATAAAA TCTTGAAAAGACCAAATTGTCATAGTAAAGAGATTCCTTTACTTTTCTAA AAGAAAACTGTTTTGCAGGGCATGTTGATAATGTGTCAGACGATCTTTTC TTTGTTTGGCTTTGTTTAAAATAATCAACAAAAGAATTCTTTCTTTTTGT TTCTTGAGTATCATTGTGAATCTCACACTTTGCAGGTTTAGATGAGGACG GGGACTTGTTGCCAAAAGGGTTGTTGTCCAATTTTTTATCAAAAGGTTTT TCCGAAACAGGTTCAATTGGATATTTCCCACTGTTGGTTTCTTCCACTGC AACATCGCTACTTTCATCCTCAGAAGTGAAACGATCCTCACCTTCAAGAA AACTACTTTTTGGACACATAGGAGAGATGCTGGAGTCACTGACAGAATAG GAATTGAACTCAAAATCAGAAATGGAACCTGTAACATTCATTTCCTCAAC CCCATTTTCACTCATAGAAGAATCACCTGGTAAACTTAATTTTCCTTGGA CTATTGGTGTTTTATCTGCAATTGATGTATCTTTAAGGTCTGAACAAGTC TCTAAAGGCAAACAATCATTGTCCCAGTTGGACATTGTTTCTTCGTCAGC TACACTTTCAGCATTCATTCCTTCATGGGACATGGATAGCTCTTGACATG TTCCAACCGTTTTAATCACAGAAACTTTATGGGCAATGCTCAAATCCCTC CTCAACTCAACTCTAAATACCTTCAAAAATTTCTTTCCATGTTTCCTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063211TCONS_00063211Clytia hemisphaericatranscript
TCONS_00063210TCONS_00063210Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_384supercontigscaffold_384:366562..376309 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.35 5.07 1.52 1.2 7.04 5.41 6.47 6.7 5.25 4.81 8.44 5.64 4.52 6.02 6.03 5.6 6.67 8.61 5.63 5.24 7.28 6.41 3.1 4.53 8.94 9.98 3 1.7 2.26 1.63