XLOC_039092 (gene) - C. hemisphaerica

Overview
NameXLOC_039092
Unique NameXLOC_039092
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_364:265201..276761+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039092 ID=XLOC_039092|Name=XLOC_039092|organism=Clytia hemisphaerica|type=gene|length=11561bp|location=Sequence derived from alignment at scaffold_364:265201..276761+ (Clytia hemisphaerica)
GAAAAATCTCCTTCCAGCTGAAATTTGGTGAGAAATCACAGCAAAATTAT CACGTTTAATTCGgtattttgttcttttattagttttttgagttttatga tAGGAAATTTTTTATTCAGCATTCAGAGGTATTTATATTGCTTTTCTATT TTACTATTCTTTTGACATCCAGCTGTCCACCCAAAATAAACAACTGAGCT GAgctttattttccatttttcatccAGAACCAGACAGGACAGCACAGGGC TAAGGTgcgggtgcatgtcactagcatagctgtcaactctcccgcattga gcgggagactcccgcatgtcaacgatttctcccgcgtgaagaaaattctg ccaaatctcccacatttttgggattttctcccgcatctcccgcatttcca aaaattttccgattttggaaaaaccaaacagcgaaatttctggattttga aagatcggaacaaaaaattccccaatttcccgaaaaaaaattccaataaa atcggattttacaagaaaatttccccgatttcccgattttccgattttga aaaatcggattatcggggaaaatttttccgacttggagctctcccgcatt tttgtgatgcaaagttgacagctatgcacTAGTCCAACACTTTCTAATCC AaaagtaaaatagtccgaaccTATAAAATAAATCCACaatttttaagtct ttttttccgacgtcacttttgagttttgtccgaaaacgaaatgAAAGATC TTAgaacagtgtagacctaactcttcatacaaaaattacgggaaacgcat atttggactttgtaccctatgctgcactcaagcacttgggcCAAAATGCC GCAaaggcaggacaaaaatcagttttttgaagtttgcaaaaaaacgccac atagaagatctttcaaattcagtatgtgaatagaccttttcgcctttgcg tccgccatattgaattgtatgcaaaaatacaggaacgaaaatgccgtggt tggatttagttggaatgtatgcaaNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNgcaattcggcaaccataatttttgcata caattcaatatggcagaCGCAatggcgaaaaggtctatagagcagtaaaa aatacaacttttctattctatttttccttttttttgcaaaagttctagta atgaaaataaagggataatgataattgaatactatccatattgatgatcc gcggcactatcgtaaagctagaatcgcttcgcgtactcttcgcttgaaaa aatgattgacagattgaagtttttcatccccgcggtgcgcgccgcgcggg agctcgggcgctctgcgagagttctcggctcaatcctcggaccgcgctaa aatgggGCAATCTCCATTAACccgacctcgacctcgaccctgacccttga aaaaggccgaccctcgtcccttggaaaaaagccgaccctcgaccaaaata caataaaaagccgaccctgggtaaaaaaaacagtttttttggcagtgttt ttttaatataaaagttGAGTAGACAAGCAGGGGGTGGAATGGGAtgcaca cgtttttttataagaagaataaTGAATCGTCAACCTcgtcgccccccccc cccgcccggCGGATCGTATTATCtgctttttgatgttttactgCGTGAGT GGAAGAGAATATAATATCTCTCGTGCATCAACGTAAAACGTAAATATCAA GCCTGGGATATATGGATACGAGGCTGATCATACATGTTGGTCAATAATAT Gatgccccggggggggggggggggggccccgtttttttttaaaaaaaaaa aaaaggaatgccaacccccccccccccccccccccccaccgacGACTATT CTTGAAGTATTCTCTAAGTGTTCTAATGATCATTTTTTGGAATATatatc caaaaaaaatcttataaaagtcGCTACAGCAAttttttacccagggtcgg ctttttattgtattttgaagggtcgagggtcggcctttttcaagggtcag gGTCGAGGTTGAGGTCGGGTTAATGGAGATTGccctaaaatggtagactg agctgtgatagatcatttcgatggaagttgttggaatgtttacaaggctc ttgacagaatattgtttgttttattgtcaatgatgacagtgccgttataa attttgttagatctgacaaattgatgtttgtaagtgcactttatagtttt gattcccattgaagaatcatattctggtttttatgttattagatgctgtt ttagagctttagagctacactgtaGAAAGAGAGGGTggaatgggctattc caaaaaaaaattgtacaggggtattgaagaacttttttaacaaacccccc tggaaattttggataacaaactatcccctggaaattagggGTTGTCACCC CTGGAATTTTCACTGAGATATATAGAATCCCCTGcctagttggcgaccga acgtctttgaacccagaaaagtcatacaaaaacaaacctctggagaattt cttttggtagtaatttgccttgacctatttcccgTACTGTGTAAAAAAgg ttttagaaaaaaacgagtagaatccgaaagatccaaaTTTGCACGGAAGC ACATGAAAAAGCcggatttaaaaaataaaataaaaaatggctacctgtgg acaaaaaagcttcgtaagaaaaaacgcttcgaCTCCCAcaccaaaaaata cttgtccaaaacaatgagtatgttagaaagcatttctgtaaaaatcagct cCATACAGTTTCCTTCgtgtgaaatattgataaaaaagttgacgCAATCA gcttcaaaatttgacgtccagtctgcgaccaaccaaactcaaaaaatgaa aaagaagacattgcgatcaaaacattccagacgcgaagagaaaaaaacag acataaaaaattcccgcgtttttatcaaatgaagactctccatagaccgc cactttcaaaacNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNatgtaagtgagctattttaaaacaaaagaacgagtgt aaataaatttaatacgggaaagcttatgagtttttttatcatcctgatca attaatATGACCTCTCTTTTTAACGATCGGTTgcagactggtacgtcggt cgggaactgggcactagtaccacgtgctttgaaagttttttattctaaga acaTTGCCtcgaataaaaaatcaaaacaaacacaaagagcatgttaaaag ttgtctaaccgttggtagaaaaggattttcaaaaaattaccttaaaggaa gaaattttggcggaaagaaaatttggtggatttggcggatttggccataA TCCGGcaaattaagttcccaccaaaatttcttttttccgtcatcccccaa attaaattcccgccaaattaaactttttgaaaatatgatctcttttaagg tgtttttacattttcttgCTGTTTTTGCGCCATTTTTCGGATatattttt cagcaaacgccaaattaaattcccaccaaatttagtttttttgtccatcc gccaaattaaattccctctaaaaaactttttcggccatccaccaaattaa attcctgccaaaatttcttccttctaGGTAAGTGAAAAGTTTTGGTCGct aactgggcaggggactctataCAGGATGAGTACGAGCTGTGAGACAGGTT TCTGCTTCAAAagatttacagtgggaaattcgaatttgtCTGTCCTCAAT TACTACAGGTGTATGTACCGCAGAATACCatgggcagttccagaaaaaaa ccattataTATCCCCTGTGGACGACagggtttttttggattttttttcca cttggaaatcctgagaaattagaaaaaggtttCGGAAAATCCAGGATTTT CTCCTCATTATTTAGTCTTACGTAttggaaaatccataaaatttgctcta ttttcttgccaagtattggaaaatcgataaaatataaaaatgatgGCTAA GGAAAACCACAAACTGTTATTGAATTTAACGGTCACTTTGAAAAACAATG TCAAGAGTCTATCTTTTTGATATCATGGATGTATTGATATTCTTGTGGTT AAGACTATTTTCATAGGTTACCTTAGAGGCTTTCAATTTGTATTTATAGG ACGTAAGGCTGTATAACCACATTCTTCTCTATTATCCAGatgaaaaatat gtaaaaacaCAATTACATTGAAGAATCCATGGAGCCAACACCACCTAAAG GTTCTCGTAACAAGAGATTTGCACAAAATAGACCTTTCTATGAATCCTCA AAGAAGACAAGTGCTGAAATCATCTCTGAAGCAAGGTCAACAGTGCGACC GTTACAAACTAGAAGACCAGAAACACCATTAGATTTGAACAATAGAACTC TTTTTGGGAAGCAAAGAGAAGGAAGACCTCCATCTGCTGTTAGGTTGGGA TCCATTGTTCTGACTACATGACATTAAATCTGCAACTTTCTCAGAAAACC TGTCAatggaatttgaaaattttttatctcaaaatttGTGCATTAAGTTT CATTTATTTAATATTCAAACTCGAAACGGAAATCCACTttattcgaataa cagagagattcgaGTTATTTGTTGAAGGGACTgggattgacttcaaatta tataaacactCATATAATATAAGTGGATGGTTAAAACTTGATTTCAGTCA GTTATATTTATTACaacttttttcattatttcagcATTTCATCTTCTTTC CATGATTCAAGACCACCTTCGGGTAAAGGAAAGCTGACACCACTTGCAAA TGTTCCTGATTTCAAAGAACTAGAACTaagacttgaagaaaaattcacNA AAGGAAAGCTGACACCACTTGCAAATGTTCCTGATTTCAAAGAACTAGAA TTaagacttgaagaaaaattcacCATTGACAAAAATGTAAGATTCATAAG GTTTATGATGAAATTCTTCTAGTTAAAAGAAACAACAGATGTTAAGGATA GATGGAATATTATTTTGGAGTAAAGGTTCCCGATAAACTTACTTTCTTCA ATTGAAATCTTGCAAAAGTTTGTcatctttttttctaagaatgtTTATCC ATGCTTTTATGGGGATATGGCAAACTCAgagttttgttttcaataatCTC TGCTATAACAGAGTCTTATTGctatttgatttgagattttGTCTCTTATT TTCTCAGTCAAATGAGATTGGCaatgacaacaacaacaacaataattcAG CcaaaaagcaaatgaaaattaaaggaAATATCATTCCAAAGAGTGCTGAA CCATCATTTTCCCGAGCAAGACGTTCAATCAAATCCTCTAAAGTAGTCGA AGAAAGACGTGTGCACAGCGGACCTAAAGAACGACCTCCAATATTTAGAG ATGATGATTTGAAACGATCAAACTCGTACAGTGATTTGACCTCAACTGAC GAGAAAGTGACTGAAACGAAACATTCTTCGAACGAACAAATTGACTCTGA TTCATTTTACAATACTAATATTGAACCGTTAATAAACCAAATGCATTTGA ACTATGAGTATGGAGATATAGAATCGCTACTGGTTAATTTAGATGTTTTA TGGAGGGTCTTGGAAGTCAGTAACATGGTTggtcaaaatgcaaaaatagc TAGGNTTGGTTAATTTGGATTTTTTATGGAGAGTCTTGGAAGTCAGTAAC ATGGTTggtcaaaatgcaaaaatagcaAGGGAACACAGAGCAGCAATATT GACGAAACTAAGTAGCTATGTGAATAATAAAAATGCTTTATTGCAGCTGA GGATTTGTAAACTATACTTAGGGGTAAGTAGTATCGTCAGTTTTCTTTTG AAGCTTTCATATGACTTGCACGTGATCCACAATGGCGAAAAAATGTTTAC CAAAAATTTTAGACTAACTGATCCAAGGCCGAGTTTTGACTattgaaatc tctaaaaaggGTTTCTACATAGTTGTTACGTCCAAATTCCAATGTTTTCT TGCTAAAGTCAAAAACGTGTAACTGCTCAGCTAAcattatttttgtttga ttatttcAGCTCAAAGTGACGAAAAGGAATTTGAGTGCAGTTTGTAAAAG CTTCTATCAAGTCACCAAGAATGAAAAGAATGATGATATGGTTCTCCAAG AGAAAATGATTGGTAAATTGTGcctctaaaattaaatatttgcAGGAGCC GATTTCCTCTATCTGTTTTTTGAGAAACTGTCTCTTTCCATTGTCAAGGC AAGTCCTAATGTAAGgttcttttcaaataaagccTTCTTTATTAAAGTAT AAATTTCTATAGGTACAGTTACAACTTTTTCTTATTTCCAAATACATTTA AGGGATCAAACTGTCCATACTGAGGGTAAGAATATAAAATATGTGAATTA CTTGAAAACTGGATATTGtgtatttgttttcatttatttttcgtCTGATA GAGCCTATACTCACCATCTTAAACAACCCCGAACAAGTGGACTCGACTAC AGATTTGGTATATTTGGTCGGTGCACTCAAGATCCTCTCAAATCAACCGA AATGTTCAAAAGAAATAAGATTACTGGATTTATTAACACCCCTCAAATGT TTGTTACAGTTCTCTGTTAAAAAGGTAAGCTTATACGATTCTACCACTAT TTTTACAATGTAAACTAAGATGGTTGGCTTTCCTTTTGACTCGGTTCGTT TTAAGATACAATGGAAAACTCGGCACTTCGAATCTCGTCTTGAAAAATAC TGAAAGAAGGTATTGGACCTTTCGTAAAGAAAGGATATGTTGGTTATAAT GTATAGCAATGGTTGTTAATGTGATGATTAATCTTTAAACAATCGCTCTG AAAGAAGTTTCTACTAACCTTCTGTTTCGTCTTAGTACACTTCTGCTGTT CAAATCAAGGAAAGTAACCACATGCTTATCCAGGTAGGCGTAACCAGTCT CTTGTTTCATATGTCATATGGAGACATTGCAGTGACTTCAAATGAGGTTC CTAAAAGTGGAATTACAAGAAACCTTTTTCAGTGGCAAAATTATCGAAAA TTTGAATCCAAAATATTGCCAGTGCCATAAATGAACGCAATcattctttt tactttgaaagcCTTTTACGCATGTTTTTAATACCCATTCGTCAATGTTC TCAGGCTTCTTCGCTGTTGAACAACTTGGCAGATTCTGCCACGTTAGCCA ATCAATTCATCGAGAATAATATTCTCCAACTATTGATGGATCTGATGAAA GCAAGGCTGGATGATGTGGATTTGATCATGCCTATCGCAAGCATTTTCAG GTAATCAATTGCCCACCCCACCATTAATGTTTGATCCTGACCTAAAACTA CTTATCCATCAACCAAGTCAACTTGTTGAGAGGTTGTTTATGCTTGGTTA AGATCCGTACTTTCTGTCCAACGTTCAATAGTTGATCTAACGGATcgcct ctacagattcgaacgtttgtttCCATAATAGcagaaattacgtaacttaa ccAAACACGATAAACCTCTACACTTTAATTGTATTGTGTTGAAATCGAAA AAGCAACTCTTTATGCTGTTACCGTCCTACTTCAAATCAAGGTCGGATTT ACCGATTTACTCGAAAACGTTTGGATGTTTCTTGACCGGTTTTTTATTCG TTATTTCTTAGCAAATTGACGATATCAGAAAGCATTTGCAACAACGTTGT GGAAGTAGAATCAAACCCTGGCTTGTTGATGAATACTTTGATAAAACACA CAAATACACAGGTTTGTTCAACTCCGAatgaacgtcaaaacaacgACAAA CCAACCTCATAACATCCATTTAACTTTAGACGTAAACAACATTGTATGCT GTGTTTGTTTTACTAAGCTGTTTCAAAATCACTTGTCAATGCTCCATAAA AAGATCTCAATTTACTTTCGAGGCTTCAATCttcatttgttttttgattt caGGAAATAGTAGTTCGATTTGGATACGCCTTTGGCAATATGGCCAACCA CTCACCAAAGTTTCGAGATATTATTCTCTCATCAAATGATATGacaaaaa attttgtcaaagtcATCCGTTTTTATACTAAAAAGCTGAGAAAGGTGTGT TTTTTATATGAAACGGGCCAAATTCTTTTAAAGCAACTGGTAACCTTTAA AAACAAGTCATTCTTCATTTTACCACATAGGAAACCATGTGTACTTTATT TTCACCATTGACAGGCTTTCTTTCTTGTTTTCCCATCCCTNCAGGAAATC ATGTGTACTTTATTTTCACCATTGACAGGCTTTCTTTCTTGTTTTCCAAT CCCTGTCTCAAAGCTCGATTCCTTGAAGGCGAACAGTGTTCGCTGGTTAT GATCATTGGAGAATGGGCAAGATTCTCTTCTTTATTAATGTTTTTCGTGA AATAGACTACACAGTTTTAAGATTACAAAATTCTCTCCTTTCATAGGATC GTTCACAGACAGACCTTACTGAAAGTTCGAAAGAATGtgaagaagatgaa gatgtCCTTGTCAAGGTCTGTCTCTTGCTCCTTATTTCGACAAATTTCTC CTAACAAATAATAAATTTGCTATCTTTGATATCTCGGAAAATTAGCATTT CTAAATTTCAGtttttaagataaaaagatGGTTGAGTCGGTTAGTTAATT AAGTATAGGGGGTTTCGCTCGACTTTGCACCTGCCAACATAACAATCAAG AATTTTTGGATCAGCAATTAATAACGAGTTTAATAACAGTACCTTTTATA TGATAAACCAATCACCTGTTTGTCGTTACCACACCGTTACGGCCTTTTGA cttaattaattttcttttttcagctcATCCGGGTCATTGCCAATCTGTCG ATAACGGAAGAAGGGGCGATCTTATTTTCAAACAACGAAGAACTCATCCA AGTCATTCTCGCTTTATTAGGTATCCATGGTCTGTTTCTAATTAAAGTTG GTGAGAATGATACCGCAAGGTTTCTCAGATTTCCATAGTGTTTTTGCCCA TAATTTCGAATATTTTGACCCGTGGGAATTGAAATTAATCCTgtgatgaa atgaaaatgtcAATATAGGATTGGAAATTTCAAGTGGTTCCATAAGCATT TATTTATTGTATTGGTAGTTTTTATTTGTATCTCACTTTAGATTTCGAAA GCCAAGGGTGTTTACTTGTCGAGCCAGTTATGAAGAGGTCGAGTAAGGTA GGCAAAATAGCCTAAAGAATCTCTCAGCTGGCAATGGTCTGAGTTTTCAA CAGATTCCAATCATGAAGGTTTAAGTCTTGAAGACTCGAATATAAGTAGG GCATAAGATCACGAACGAAGAATATTATCAATTGATAAGCCTTAACGTAT CTATCCTTAACATTTTCATTTCAGAGAATTGTGATCTATTGAAATTGTCG CAAGAACTCATCATCAATACGTCAGCAACGGTCAACAATATGTCTTTCTT CAACGATCCAGACAGTATTCTAGTCAAAAATACCGAGACCTTTACCCGTG GTAAGTACATGAGAattattatcaaaatttatctGTTGTAGGACTTGCCT TGTTATTTCTTCTTATTTCTTTTCATCGTGGAGTCGTGGAAGGTAGTAAA AAGAAAATACGGGGGATGAGGATGACGAGAAGGACATCATTAGGTATTAT AAACGACTCTCAGCAAAGGGAAGGTTCCGCCGCTTATCGCTTAGAGACAA GCTGAATTTCATGGAAGAAATGTAATTAACTTTCCATATCGCCATCTCTA TCCATAATTCATAATAGAGACTGATGTTgttcaacctcgttccctgtgta ttatcGGTTTTTTGATACTTCCTGATAACGCCTGAAAAGTTAGAGAATAC CCTGGTAATGTCTGTTTTTCGAATCCAAAAGATACGCAATTCaataacaa atttttattaTGTAGTGTAGTTTTTGTTAGTAATATCgatgaatatttta aaaaaaattatagtaaaaaaaaaaaattcaacaacaAGACGTCAGATTTT TATGGCGTATAGTTTTATTCTTTGGCGTAAATAAAGTCTGGGGACGGGGT TGACTGAAGTTATTTTCTTTCAACTTAATGATAattcattttcaccattt tttttaCGTTTAGCATTTTTGGACATAGTGCTGACAAAGAATCAAGACTG TTGTGTAGAAGCCATGAGAGCTTTAGGGAACTTTACTCAAAGCGAAGATT CGAGACGTCTTTTAGTCGAAGGCAGAGGTAAAAATTCgccttttaaaaat caaaaaattatgcCATCCTTTTTAGCATGAAAATTTATCCAAAATTCTAG ATAAAATTCCAGACGCTTGGAATCAAGCTATGCTTGGAGCTCGTCACATT AACAGCTGTTATTTAAGGGAGTTTTCAAAGTCCTTTAATATACAGGTAAG GTTTGGAAAGTTACCGTTGACTTCCTAGCTAAGAGAAGTTCTTTCTAACT TCGTAGGTAacataataaaatattttaaaatcgttATCACATTTCAATAC TTTCTAGTCTAAACAATCGAATGTCTTTAAAGATAAATAATAAGTAGTGG ATAAAAACTGTAACTGTATAAAAGTGATCGAGATTCAGGTAAATTTAAAT ACAGCttacactctctaattcgacgttctactattagATACGCTCCAtaa ttcgataatattgaatggaaccatcaacaagaaactctcgtaAACGACGC AATACTATTCGATATGCTCtatattcgatgaaaatccgattgCCCTTGAA ATTCGAATTAGGGAGCGTCAAATGTATTTCTAAAAAGACTTACTCATCTT TTCCCCATTTCCCGTAGGATTACAAGCAATAATAATGTTGTTGGATTCGA GTAGTATCGATCTCGCGTTCTGTGTATGTGGAGTGTTGATTAATATGATG GTCGATCGGTCGACGCGAACTCTCATCAAAAACGACCAACAAACTATATC AAAGTATGTTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062389TCONS_00062389Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062389-proteinTCONS_00062389-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_364supercontigscaffold_364:265201..276761 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ARMC2PREDICTED: armadillo repeat-containing protein 2 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
20.53 18.64 26.46 24.2 43.3 32.41 24.07 24.94 15.32 19.33 11.87 10.74 5.64 5.53 6.28 6.2 5.71 6.49 2.74 3.16 5.04 3.97 19.11 17.15 19.86 22.3 8.23 7.71 13.63 16.03