XLOC_039021 (gene) - C. hemisphaerica

Overview
NameXLOC_039021
Unique NameXLOC_039021
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_362:516474..519937-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039021 ID=XLOC_039021|Name=XLOC_039021|organism=Clytia hemisphaerica|type=gene|length=3464bp|location=Sequence derived from alignment at scaffold_362:516474..519937- (Clytia hemisphaerica)
TTCGAGAGAAAAGATTTTTTGTTCACACTTTCAAAACGGGAAAAAAAGAT
GGCAAACTTCAACAAGACTTATACTTTCATCCTCCTCGTTGCTGTTTTCG
CATGTTGCTATGGTGACAATAAATGTGTCATTTTGAATGATGTTAATGGC
TGTAGTACACCAATCAAATCTGATCAAATACCATACAGAGTTCGATTTAC
GCCTGCTTGTAACTCACATGATGCTTGCTACAGATGCGTAAGTAGAAACA
TTTCGAAATCACAATTGACTCCCCCTTATTCGACTCAAAGGACCGATTAT
TATGAATACGATAATGAGAGGGTTCAAAAAGGTTTTTGTAAAATATTTAA
TTTTGATACACACTAACCTTTAAAAAACCCTGCATAAGTTTTACTTGCCA
TTTTTGATCGTTGTTTTACCTAAAACATACTACCCTAATGTTAACTTAAC
TCGAGATTTGGGTCAAGGACTCTGACCATAAGCAGAAAATTGAAGATAAA
ACATTTGCTTTAGGTTCTTTGACATTTTAACAAAAACTGACTTTCACAAG
TTGTTTTGCAAAGAATTGATTTATTTTAAATTTTTCGGAAAATTTTTCTA
AATCGATGTATCAAAGATTATGACTGTTAATGANATAAATTTTTTGGAAA
ATTTTTCTAAATCGATGTATCAAAGATTATGACTGTTAATGAGAATTAAA
AATAGGGATGAAGAATTGGGCAAAAGCCAATATTTTCAAAATTTTGAGAC
GAAGAAGCTTTTTCAAAAATTCTCTGAAAATCCATTTTTAGTTCGGGTAA
AGATACACCATCTACCGCAAAATAATTTTCAAAATGTTTATTCTGATCGC
CAAAAATAAGGTCTCAAAGCCGAAGTACTCTTCTTCAATTTATATTTTGT
ACATGTCTATAACATGCCGCAATTAGGAAACTTACTATGGTCAGAGCCCT
TAATGTATAATAAAATGCCGTTTTCCGTCGAAAAAGTGTTGACCTACTTC
GAGTATAGAACTGCAATAAATTCTTATCACCGATTTTGATTTGCTGGAAT
TTAGAAACTGTATCCAAACTGTTAAGACTAAATTCACAGAACGCTATAGC
GGAGTAACCATTGATAGAAAAAGAAACTTTTTCTATATCTTTAGGGACAA
ATGTACAACTGGACTCAAAGTGATTGTGATAATGGTTTCTTGAACAAAAT
GAAAGCTGTTTGTGTCAACCAACCCGATCAAACAGCATTCAGTGTATACG
CTAGCACCAAAGGTAAAGATTTTCAACCTTCTTGTATACCTGCTATACGT
TTAATTATTAAATCAGTCGACGCTCTCTAATTCGACATCCTACTATTCGA
TAATACCATTATTCGATAATATTGAAAGTCACCGTTTACAAGAAATGCCA
TAAACGACGCTCTCTTATTCAATGATCGAATCAAATCGAATAATAGAGCA
TCCACTGTACTTGCAACACGTAAAATCGAAACTTTAAGGCCGAGGCACGA
CCCTGTGTTTGGCTAAGATTTACATTTTTGTATGAATTATTGGATATACT
CTGTCTCAGTGACCCTGAGAGCTTTTCTATTGACTGGGAACAGATTGAAG
GAGCTAATAGGCAAATGAGGATTGAGAAATATGTTTAAATGTTATTGATT
TATGGCTAGCTCTCAAATTCTTAGTGCTTTTTACCAAACGCAAAACAACG
TTCATGTGACATTCATAACGTCTAAATAACGTTATTTGAATGTTAAAACA
ACGTTGTGTGCCAGCTGGGTCACCAATAATGAATGAGGTCTGTGTTTAGT
TTTTTCAATGGTGATTACAGGATATTTTTTTCTCAACACACCGAGGTAAG
TTTTTGGCCGATTTTTGCACTGGGTAGGGGCTCCAACGCCCACCCAGTCT
ACCTTAAGGGAACATATTTTGGAGAGCGGCGAAAATCTTAAAATATTTTA
ATTTTGGCGGGAACTTATTTTGGCGAATAGTGAATTTTTTTAATTTTGGC
GGGAACTAATTTTGGCGGATGACAGCGTAAATCTGTTCTATTTTGCCTTA
TGTTGAGCAATTTTGATGAATTTCAGGGGTTATTTAGGCAAGGGAACAAA
AAATTTAATTTGTTGGGAACTTATTTTGGCGAGTGAGCAAAATATTTAAT
TTTAGCGGGAACTAATTTTGGCGAATTTTGCCTAAATTCGCCAAATTCCC
CAAAATTAGTTCCCGCCAAAATAAGTTCCCTAAGGTATAATCTGAAAACA
CTTCAACATTTATTGCAATATGTTTTCTTTTCTTTTTCAGGAAAAATGAT
GTCCTATCTCGAATTCTTCAAACGCATTTACGACGGATACAAAAAAGCCA
CTCAAAACGGAACCAAAGCTGAAGCGCAAAGAGTCTGGGACGAGTGTCAA
AAACTCTTATCAGTATTTAGACAATGGATCAAAGCTTCTCCAGGAGTTCC
GAAATGTCTATTGGGGGCACAAGGATATTATCATGCAGTCCGTNCCCAGG
AGTTCCAAAATGTCTATTGGGGGCACAAGGATATTATCATGCAGTCCGTG
CTTTTGGTATCTACGCTTATCGGCATAGTAATCTTAAAGTTTTTTGTAAA
GACAAATGTGCAAAGGATTTAGCTAACCCATTCTAAAGAGAATTTATTAT
ACTGTGTTTACTTGATTTTTACTTTAACCGTCTAAGTGCCACGGTCCTGT
GCGTCACCCTACTATATATAGCCAATGTCCGATATACCTTAAAGGAAGAA
ATTTTGGCGGGAATTTAATTTGGCGGATTGCCAAAAAAGTTTTTTCAGAG
GGAATTTAATTTGGCGGATGGACGAAAAAACTAAATTTGGCGGCAATTTA
ATTTGGCGGTCGCTTAAAAATTTAACCTTAAGATGGCGTCGAAACAGCGA
AAAAATAGCAAAAACACCTTAAAAGAGATCATATTTTCAAAATGTTTAAT
TTGGCGGGAATATAATTTGGCGGATGGCGGAAAAAAGAAATTTTGGCGGG
AACTTAATTTGGCGGATTTTAGTCAAATCCGCCAAATCCGCCAAATTTTC
TTTCCGCCAAAATTTCTTCCTTTAAGGTACCCGACATTGACACTTAAAGG
GTTAACATATTTCACTACACATAACCAACTGTAACATATTGTAGCATGTA
CCGAACTCTGCTACTTGAGAAAATTATTTCAGTGAGGCAGCAATTTTATA
ACCTTTTAATTTAACGAGAATTAACTTTGTCGAACGGCACCGTATGTTGA
TTTTTTGCCTATCGATGATTGTTTCAGAGAAAAATCAGGGTTTATTTAAA
AATCATTAAAATAATTAAATTTGGCGTGGAATTTCTTTTATTTTTTCATG
AACTTTTTTTCGAGAGCTACTTTAGGCGTACAAACTTTCGCGAGCAGAAA
CTTTCGCGATTTTCGCGAATTTTGGCCCTTTTCGCGAAAGTAAATGTATT
TGAAAATTCTTAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062258TCONS_00062258Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062258-proteinTCONS_00062258-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_362supercontigscaffold_362:516474..519937 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.56	0.33	0.62	1.06	1	0.74	3.42	3.41	2.27	0.72	1.06	1.8	16.62	17.29	10.98	28.05	11.01	9.71	45.47	47.77	40.9	40.04	31.72	35.01	33.85	41.37	1.8	2.33	9.96	14.21