XLOC_038989 (gene) - C. hemisphaerica

Overview
NameXLOC_038989
Unique NameXLOC_038989
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_362:401442..406423+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038989 ID=XLOC_038989|Name=XLOC_038989|organism=Clytia hemisphaerica|type=gene|length=4982bp|location=Sequence derived from alignment at scaffold_362:401442..406423+ (Clytia hemisphaerica)
ataaaacttttttttatacatttttatacATTGTAATTCTTTACAACAAA GGAATTATGCTTTAATCAGAAATTATTAGGGCTGAAATTACATGTCTTTA atcaaagtaaaaatctttctccTCACAGGGAAGGAAGGATATAtctgtaa attttgttttcgtTTCGAGTGATATTTTTCGGAgccgtttaaaaaaaaat tgttaactTTATGTCTGTCCATTAATATAGATAGCAGTCTGTGTTTTATC ctgttctttttgacttcacTCAAATCAagtttggtcttcaaaataacaaa ttgaaaaagaaatcatgCTTTGGCACAAGAGTAATACGTCATTTGGAGTT GAAAGTCTCCCAACCTTCTAGAGTTAAAACCTAAGTTAAGCTGCTTCAAA AATAGACGAGCTTAACACAACAGAAATAACTTTAACAATTTTGTACATTT GTTTTGTAGCTTCCATTTGGTTCGGTTGGGTTAGACTCCTTGCGATTGAA AATCATTATTAAAAAGGTGTTTTTTCGATGGCTTTGGATTTTGGTCTAGG ATGTCTCGGAGGTAAGCTATTTGGCTGCTTGTTCATCACGTGAAAACGTT TTCCAGTAGGCACAAAATGATGTTAAAGCAACATCCGTCTAAAGGTCTTT CTCATGCAGGCTGGACCGTCGGGGCACATAGTCAAAATTGGGCAAAGGGA CTTGCCAATGGCCAGGGTTCCTTTTATTAAGCTTTTTTTTTCAGGATGAA agttggaaaatattttcaattttcgtctacttttagtcatttcttgCTAT TTTTCAGGGTGAAACTAAATTGTGTAGCGACTGGTTAGAAATTTTAGAGT AGACGAAACTTTTTGGCGCTATTAAAGAACCTCTCAGTCTTTAggtaata gcgagtttatgtattcgagataaatagaggggggacggtataaagcagag ttgacatgtctccaaaatcaccatCCActtttgctcgacgacggtaaaaa caccaaaataccgtcgtctgtttaggtgagcaaaggcgatatagagccgt acatcaagtatcgactttgttttgtatcgatttcagttaccgtcgccctc gatatcctccgatacataaactcggtaattaAAAGAAGACTGGAGACAAC TTATTTCTTCATCATTATTTATCATTGTAGGTTTCGCGGGAACCTTAGTT GGCCATCCATTTGATACAGTCAAGGTATTTATGTCCATTAATTACTTAAT TACcgatttttatgatattttacaATTcactttgtgttttttttttcact cttcATATTTAATTTATTTACCATAGCCAGTTATAACGAAAAACAAGATC AAAAGTATGAAACAAAGGAAGGTATAGAATCTTTCCAATATTCtcgatat gcgtaagtcaagattaaaTCATTcttcctatcggaaacacccgaaaagac cggaatttgacccctgtgttACTAATAACGCTCAAATTTCGGTGTTTTTG GGTGCTGCTGATAGGAAAAATGATGTAATCTGGGCTAACGCATACCAAGA GTTGTCAACCTATCAGCAAGATGGAGTGAAAAGAATAAGCCCGGACTTGc tgaaggttttatttttacataagtgttcccgtttcatatcagacacatat ttcatatcaggacagggtctgcctattgttatattatgctgatataaaca aaaattgttttctttccctctttctgatcatctccacatccgtgtcaatc caatgtgaaaaagcttgtaaattagaattgacgagtaagcaaacgatatc actcttattcaaaaacaaaacctttaagtaaaatattttagcaatatatt ttattgGATTCGACTCAGCCTCGACAGctcttttttgaaaactttagact taaatgttactttattcaAATAACAGTATGAAGACTCGTGTTGCtgtaaa attgttaaaattagATAGCAAAGAGCGATAGTTAGATTGAGTTGTGGTAA GTTTTGAATAGTGGATCTCATTCAACCTGTATGTATCCTTTTTCTAACGA TGACTTTCCCTTACAGAGACAATCAACACTCGAGACGACGCTCTGCTCCA ATCCTCATTACTGTCTCAATTCAACTATCATCAACAGTTAGTTTCAAAAC AAGCACTCATATAGTGTGCCTCCATCTAATAAAACCCTTCCATTTCAGCT AATACCCCTTACaatatttcaaacaaatttatttgagaagtatttccaat tttttcaaaactgatcTTAAAAACATAATTGCTAGATATTTTTGACCGTC TAAGCAAACTTGAGTCTACAgaaagatttttgtcaaataaatCAAGCaac acaaaaacattttcttaaaaaaataaatccacTGTCAATAACATTTAGTG CCTTCGCCCTTATGcgttaatttcaaaaaaataagaaaggtGCCGCATCC AATTCgcctactttcactttcgttttttaaCTTCAGGTTCGACTGCAGAG CCAAGATAAGAATAACATCAAATACAAAGGAACATGGAATTGTTTCTCAC AAATCATCAAGAAGGAATCTGTAAGTATCTCATCATTTGATACAAACGAA AAGATTCCTCAAAGCCAGtattaattttaatttgattCAATAGTCTTATT TTTGAccagaaaaagaattttggCAGCGCCCAAGAAACTGGCCAAGACTT TTTATTTACTGTTACTGTATATATCTGCTACagtcagtctgtgccactac ctcgatcgggaagattcttccgaaatgggaagaaccttcccgaacAGGAA GAacttactttatttttttctgcccGTTTTGGAAGgattcttcctctttg ggaagttgaaaattgactgaatctcggcgaagctgtacgatgaccggcga aagttgaaactttttggaggtgaagaagcatcaaattttaaggtttttca ccgaaagaaaagtagactttaccgtagaaatcttgttaaattgtAAAAAA ACTGCGTAAACTTCCCAAACGAGAATTTCCAACCCGATCGAGTTTTCCTT AGTTTCTCGCTTCTTCCCGATCTGGAAGTCCGTTAACCCGTTTGGGTGTT ACgttaatttcccgttcgggaggattcttcccatttcggaagaatcttcc aattttggaagaatcttcccgatcgagttagagGCACAGACTGACAGTAT TTACATAATAAGACCTTGTGTCTACTATCACtttcttttctaaaaatcaG ATACTTTCATTGATGAGCAGATCTGATTAATACCTTATTACTCGAATAGT actgaattgaaaaatttcgtgttaattaaaaccccttgaattaaaaccag ccgtggtgtccttgaaaaagcaataaaattcaTGTTAATTTTAAGGCCGT TAAATACTTCCATACttatattcgtgtaataaggtatccCAGTTGACAAA AACGTCATATGGGTCGGATATACTTCTTTTCATTTATTGCAGATGTTTGG CTTGTACAAAGGCATGGTATCTCCTTTATACGGACAAATCGGCATCAACG CTATTGTATTTGGTATCCATGGCAACGTATTAAAAGGCCTTGGTAATCGA GACATTAAATCACAATTTTTTGCTGGTGCTGTAGCAGGCGGAGTGCAAAG CGTTATAGCATCCCCAATGGAGCTCGTTAAAATTCGTTTCCAGATGCAAG GAGAAGGAGTACTTAAACACAACAAACTGACGGCAGCCGACCATAAATAT TTCTATGACTCTCCTACAGACTGTCTTAAGAAGATTTATAAACACGAGGG TGGTGCTAAAGGACTTTTCCGTGGCATGAGTTTAACCTTAGTACGTTGCT TAAACTCGTTCGGAATTTATTTCGCATCTTATGATTTCTTATGTAAAAAG ACGNGCTTAAACTCTTTCGGAATTTATTTCGCATCTTATGATTTCTTATG TAAAAAGACGGATGCGGTCACGGAAGAATGTGTTAACGTCTGGAAACTCC TGCTCTGTGGAGGCACGGCTGGTAGTATTTGTTGGCTGATTGCCTACCCG ACAGATGTGATCAAGACACGGCAACAAATGGACGGCATGGGACGTACCAA ATACAAAGGTGTCATTGACTGTACCTTGAAAAGCATACACGAGGAAGGCT ATCGTGTCTTGTTCCGTGGTCTGAACGCAACGCTTCTGCGAGCGTTCCCA ACCAACGCCGCCACTCTAGCTACGGTAACAGTGACGTCAAAAATGTTGGA AcagaattgttgaaattgaaagtaGAAATAACGCGAAAGACTTGATTCAC TTCTAACCAATTAGACTTCTGAAGAAACATTTAGAGGGGACGTATGGAAT ATAAATTAAAAACTCTTGAAAATGTCGAAAAGAATTACCGATTCATAATA TATAATCATTACATAATATCATTGtattattggtcagcctaagctgagca ttcaaatccgtaaaattcatttcttccatcatcatcatcataagacggca aaaaaaaaatccgatttcccgatctccctttgatttttaaactttcttcc gataaggttaactttttgggtacttttagcgtgcgttgtttttacagatc ataatgtggtgtttcaagatggcggctcaagcgataagtcagatgtgata agtcagtgttgttccgatcgggttaactttttgggtacttttagcgtgcg ttgtttttacagatcatcaTGTGGTggatgtggtgtttcaagatggcggc tcaagcgatacctaagtcagatgtgataagtcagtgttgttccgatcggg ttaactttttgggtacttttagcgtgcgttgtttttacagatcatcaTGT GGTggatgtggtgtttcaagatggcggctcaagcgatacctaagtcagat gtgataagtcagtgttgttccgatcgggttaactttttgggtacttttag cgtgcgttgtttttacagatcataatgtggtg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062183TCONS_00062183Clytia hemisphaericatranscript
TCONS_00062184TCONS_00062184Clytia hemisphaericatranscript
TCONS_00062185TCONS_00062185Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062183-proteinTCONS_00062183-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_362supercontigscaffold_362:401442..406423 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SLC25A29PREDICTED: mitochondrial basic amino acids transporter isoform X2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.02 1.1 1.61 2.61 0.74 0.64 1.88 1.86 2.29 1.84 9.57 6.36 5.46 2.09 0.48 0.68 13.09 12.81 1.1 0.95 85.16 80.97 30.28 32.64 132.27 97.22 81.53 60.27 25.31 23.37