XLOC_038832 (gene) - C. hemisphaerica

Overview
NameXLOC_038832
Unique NameXLOC_038832
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_361:1436931..1446317+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038832 ID=XLOC_038832|Name=XLOC_038832|organism=Clytia hemisphaerica|type=gene|length=9387bp|location=Sequence derived from alignment at scaffold_361:1436931..1446317+ (Clytia hemisphaerica)
TTACATATTAACTCTCAAGATAATAATATAATACCtaataatattgaaaa
atttcctacTTGGTAGTATGGCAAAAAAGTTCTTAATACTCTGATATACA
CTCTCAttcattcttaaaaatttagaaaaatcatgTCATCAATCGACTCT
CCAACGCGCAAGAGAAGTCAAGATAATGATCGATTTGAGGACTTGGAAGA
ATATTTGTCAACATTGAGAAACGAGGATCTAATCAATATTGTGAGAGAAT
GCTGGCCTACTTCCAAAGAAATTATTCTGAAattaatttcaaagaaaaag
aaacttgACGAAGAAGCAGCAACGGCCAAAAAGTTGAGAATCGAAAAAGA
CAAGACAGATATTGTAGAAACAAACTGGATTTTTACAGTATATGATCATC
AAGTTATCAATATCAAAGAAGGTGTTATAAAACTTGGAATGTATCGTGAA
AAAGGAAAAGACCTGACTTTGTCTAAAAATGGGGAATGGAACGAAGAGGG
AGAACTTGTGTTTAAAATCTATGATAATGGATACTGCGATTGCTCAGGTA
GTAACGAAGTCCTTACATTAAAAATAGAGAGAGATGCCAACGAAACGAAA
AAGAGAGTTCGACTTTCTGGTTATCTAGAATGTTACTGTACCTTTGATCA
TGGCTTATGGCTGCTAAGAAAATTNGGTCACACTAgagattttacttttt
ataaaatcgGATAACAATAGGTAGAAGCAAAATTCTTTTCAGTTACGATC
TCAAATCAATTCCGGTCTGAaaagttttgagttttttcttctcttgctcA
AGCCAGACACAAAAGactttattgtttaaattttaaaaatttttcgagGT
GCCCCCGAGCTCCTCTTTTCtgtttcgaattttaaaacaatggaCCTCTC
AGAAAAATGCAAAATGTTATCTGGTTGATTTCATTGTTTCCATAAAAGAA
GTAGTGTATTATCATACAGAATATAATGGGATGGGTGTGGTGATATAAAT
AAACGTGAGAAGATTTCTCTCACACAAATCATTTCAAAGAAAGCTGTGCA
CTGTTTCTGTGTGCAAAGTGTTGAGTTTGTGAAGCGAAGCAAAATGAATT
ATAACAATTATTGTGGTCCAGGTTACAAACCTACGTATTATCCTGTACCA
AGTCACCTTAACGAAATGCCACCAATGGCATCACAACAAATGGTATCTTT
ACAAATGCCGCCGATGCAACCCTTTCCACCTCAGCAAATGGTACCTCCAA
TGTTTCCACAACAAGTCGTTCCACACCAAGCTCCTCAAACACAACCTGAA
CCAAAGAAAATTCGTTTcaccaaaacacaaaaacatATACTAATCACGCA
ATGGTGCGAAAACATTTCAACGAAATTCAATCAAGTCGCTGTAACCAGGT
TTGGCCAGACATcgtgaaaaaagtttcaaagcatGGACAAccgaaaaatc
taaatcaatgCAAGCAAAAGATATGGGGAATGAAAGACAAATATCATAAA
TGCAAAAAGCTCATGAACGAATCAACTGGTGGAGCCGCTGTTAAAAAGTG
TGAATATTTTGATGATATTGACAAAGTGTTATCCGACAGAGATGTTGAAA
ATCTACCTGAATTTTTTGAAGTCGGCGCAGGAAACGAGTTAGAGCCTTCT
GAGAACTTTGATGTAACCACACCACCAGCAGTTGAGAAAGATGATGCGTC
GGGCATTGAACCTTGCAGTGCAAGTTCAGCTATCAAGAGAAAACTTATCG
AAGAAAACGAGACACAAGATGACTTAGATAGTTCACTAGAATATGTGAAA
CAGTTAGAAACTGACGTGCGTAAACATTCCGCCAAGAAAGttccaaagaa
agaaaaaccgaAAACATTCCAGGAACAGCTTATCGAAATGCAAAAGGAGC
AAATTAAAGTTTTTGAGAGAAGTgaagaaaactttcaaaaatttcaacta
TCAATGCACCAAAAACAGCTTGAGGCTGAAGCcaaagacaaagaaaaaga
aagagagtttttcttaaaatttggacAGATATTTGCCGGTAATAAAgaca
ataacaacaacaacaaataacttttttaagttcagaaaaattcttttgtt
aaaaacgGTATTATTACAGTAGTACGCAGTagtatcttttgaaattttac
attgaCACGAATTGGCACTTGTCACTTCGATCATTTGTCACGGACAGTAT
TCTGGGAGCCCAGATTAGGATTAGGATTTTTAtcatagtttttcttttga
catGTCGTTTATTGATTTAAATAGTTGGTTAATGAGATACGAGAAGTATT
TCCATTAGGATTTCGATCATAATTCTGCCGTCTTCTTTGTCTTGACTGTC
TCTCTTGTCTCAAAATATATTCGAGAACACCATCCTCATCTGTATAAGTT
TCATTGTTCATTTGACAAAAATTGTGTAGAGTGACGCAGGCGATTGTCAC
AGCAGCGACATTTTCAATCCTATTATCAAGTCGTTTGAGTAAGATTCTCC
ATCGAGCTTTTAAGATCCCAAATGCTCTCTCGACATGAACCCGACCACTC
GATAATTTTCGGTTAAAAACACGTTGATCTCTTGTTAGCCCTGGTCCGAA
TTGGTGTGGTGTGATTAGCCATGATAGTAAGGGATAGGCACCGTCTCCGA
GGACAAGGGGTCTTATTTCTGAATCATCGATTACGTCAATAGGTTTCGTC
AAAATTTCTTGATTTTCGGCCCTTCTAAAGAGTGAGGAGTTTCGAAGGTT
TCTAGCGTCGTGACAACTACCTGGAAATCCCGTTGCAACATCTAAAAACA
TTAAATTTGCCCCAACTAACCCTTGTACTGATACTGTGTAGCACTGTTTC
CTACTGTAATAGTCAGCTTTCGATTCAACACTGGGAGCAGATATTGGGAT
GTGAGTTCCATCCAAAGCGCCAACTACCTGGGGAAATTCGGTTTGGTAGT
TCATCTTAAATTCTTCTATCGCCTTAGCAGTATCTCTTCTTGTTTGAGGA
AATTTGATAAACCTTTGGGAGAGTCTCGTTAGTTCTAAACAAAATTCCTT
TGTTATTTGTACTGCCGTTGAGCTTCCAACGGCAAATGTTTTTGCGACAG
TCCTAAAGGAGTTTCCAGTTGCCAGCCTCCATAAAGCAATCGCTACTCTT
TTTTCTATGGGTATTGCTCTGCGTAACTGTGTGTCACGTTTTTCTAATCT
TGGCCGAACAAGTGCTACTAACGACAGAAAGGTCTCCCGTGACATTCGAA
AATCGTTACgccaaaaatgattaaaaatctGATCTGCCTGCATACGCGAA
AACCAAAACTCTTGTCTGGGGTAAGCCCATAACGAACGTGCTCTACGAAC
TCTTAATTGTAGCAAAGAAGTACGCATGATGGATGACAAAAAGAATCTTC
TAGTTAACGAGCGATGATGGGATATTGCgtttttgaaacaaattttgctA
AAACGTCGTTTTTTATGCTTCTTTTGATAGTGCTTGAGAAGGAGCAGAAG
TAGTGCTTTTGATTCGGTGTCCATAAtgtaaaagctcaaaaagtttGAAT
GAGTTTGTTTATTAATTTCCTGGTAAGAGAAAAACTAATAGAAAAAAGCA
CTATTGAAAAGCTCTATTGTTAAAaaccattttaaaatttttaaaatttc
atagtGTGACTACTGCAATTCAGTTGGTGAaatgcttttataagaacatg
ccaaaagtaataatgtagccaatgatttcttatttaccttattcactgtt
cttaaaaatcaatgaacgtacaaaaatgagtatgtgttttaataaatttt
tcgcaccaaaacttttctatgacgtcaaggctttttctttcagttttttt
ctacacagaagatataagttattttaatcattctgattaaggcctgtttc
catcgatcgcgcgagcgtgcacgctaggccaaaattcttaaaatagattT
GGCCGTAAACTCCGCGCGATCAATGTTTGATTTCCATCAAGAAAGAGGTT
GACTCGAACACAATctgtatgtttacatttttttgtttactcagcagttt
atctctttcttgattggttgaaaaattatNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACATTTTG
TGTACAAGAAAGTTTAATTCGTGACGTCAATgtgctattttaggaaattt
tgccctaccgtgcacgctcgcgcgatcgatggaaacaggcctttatgata
aattatttccccttctttttttatttttttttcgttattgttataggatg
tttgtagctagcattatgaaaacttattcgtgcataattagaataattaa
cataatatatgcatggatcgtgcatcgcgcatcgtgaatcgttggatcgc
gcatcgtaaattacacaaaccggaAAATTAGCATGTGACTGTGATGACAT
TGGCTACCCAGATGGTGAAGAAGAGCAAAATGAATTCTAAATTACCTTTA
TATTGATTAAATTTCTCGTggattgattttttcaattttgcaaaattCGA
CCCTTTAAATTTAGTCCTCGCAATAAATTGAAAATcccaaatttggccaa
aatcgctagaaatatgaaaaaatgtaggtgaaaaagaggctgatttgaaa
atgttaatctacacgaaaatttaacaaaaagttcTCTTCGTGCGTGAATT
ATTTATGATCAATATCTCAGGGCATCTTTacaaaattgcaattttttaaa
gCCCTTTTTGTCTGTCACTCGCTACctttaaaaaagtcaatttaACAAAC
AAGTAAAGTCAAATataaactgtatcagacttgaCCATCAAACTCAGAAA
TGTTAGAAGTTTGTCATCTGTaatctcttttttattttgaaattggaTTC
CAAGACTAATCACTTCACAGCATAATGATGCTTTGGTGCTTACCCGTTAG
TGCATTATAAATAATTATAAAGGAAAACTATAACTTATATAACTATAATT
TAAATTATTTGGCTAGTCAAACCAAATTTATATGGGGGATTTGCGCTAAA
TCTGTAccgtgtcccgtccgaaatcatgaaaagaaagttcaattttttaa
cATCACTCTGTTTTTTTATGACAGTCTATAGCCTatatttcatggaaatt
taCCTTGTCACCACATCTTAAGGCCTAATTATAAATtagccattagaccg
tatgaaaatggtaaattcatggtttaaaaaaaatcaaaactaacttGCAA
TGGAGAGTATCAGAGATTGTAAGGGTTGTAACAGGTGATGTTTAAAGTAT
CACTAAACTTTAAGCAAATCCTTTTTTATTGCCTTGTTTTGATTGGCATA
GTAGATACCaaaaatgatttcggacggacAATAATTTGCTAGACTAAAAG
CAagaatacatcagaaaaatgtaTAGAGGAAGCAAGGAAGCTATAGAACA
ctctaaaattgttcttataaaagtcaTCTTAGAAAATTAGAATAGATCTT
AAAAATCTGTATCaccattttcatttctttttcaaggctatttgtgtttg
tttgtttttcctgtcctgtccgaaatcatttttcgtaaaaattttaTTCA
AGACTTGCtatttccttttccttttcctttctCAATGATCAGTAAGTGAA
CAAATAAGTATCTCAAACAGAAAAGACTTGAGAATCTTTCCCTGTTTTGT
TCCAGCAGTGATTTTTATGTAAAACCTGTTTTTACGGGAAAgttgtcccg
tccgaaatcaatTCATATTTTCATGGTTTAAAAGTGGTGTAAAAACTTTA
CTTTAATTGCCCTATTTGAACTTTTTGCTTACCATTACCTCTTGCTGATA
ACTTCCTAAATGTCAAACACTCTCATTTTACTACAAATTGaaagatattt
gaaaaattatgatttcGGATGGGACAAGTAATTTCGGACTGGAAATTTTT
TTAGCACCCCAAAAATCAAATCTAATGGGCTTTGAATCTTTCCTTTTCTC
AATTAAAATATGATCTAACCTAGATTACAATATCCAGTCATTGTAATCTT
TTGAACGGGACATTCAGCAATGCTAACTTAATGGAAAATTAAtacttttt
gacatattttcaaaaacatagaTTAAACTTACCCTCAAACTTAAAAACCC
TTCAATGAACACTCTTACAATGGGGGTAATATgcaatgatttcggacggg
acaaaTTCCGGTGACAAAATGGACGTAAACAGAAAACACTGCTAGAGCAA
GatggaaaaaaggtttcaaaacacttttttgtagaaaaacacaTGAATAA
GTTGCCTTTTATGAAAAAGGACGATTCCAGGGCAAATACCTTTCTGGAAA
GAAAGTGTTACCATAAAACTGAACCACTTTTTTacgaaaaattgccaaaa
taaggaaaaattgACACAGAGTTTATAATTGCAGACTAATGGTAGACagt
taaaacatgaaattttgcagaaagtgTGTCATTACCAAGCTGTCTCTGAT
GAAAAAAAGGAATAATTAACACTTAACTTTAATGAGATATATGCAAAGAA
AAACGATTTCGGACGGGACGGTACAGTTTTAGTGCAAATCGCCAATAtag
aaatatttatttaaagTATTATATTTTGTGCATATTTTTGATATCATCAA
CAACTACATAGGGGGGGGGTTTCAcatttacggtatgacggtattgggcc
tttttacccccggtaaatcggtattacgagaaaaaaacgacgggattacg
gtatttcattttctaccggtatcgggaaattgcctgttttttgtcggtat
ttcgatatctttatcaataaaaaacggtatttcggtataaaactatttat
cttttagtttcttcatgagtttcatgcagaaaaattttctaaaaagataa
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttca
tgcagaaaaattttcaaaaaagataagtctattccacgattttaaccagt
aaaattttcttgctcgcttcgctcgcacaatcttggatgtcctacagtat
tgacttattgtcatggtgaggttattctaaataagcaaaactttacgata
tttaaacaaatatttttattatttttctgcgggcgcatttttttaatgac
aacttttgtgatgcaaatactgcatccagcaaatgagtctagataaaatt
ttccccgtcagcactacaatcagtgccataatatattggcacttttggct
aatttaccatttttctaaaattgaagttcgagcgagaatgtcaattttta
ggccttcaacttgatttcatcgattatttcgatctagGAGGGATTtgttg
gtttctaggctatatttcaagccctactagaccatttttgaacttttgga
tcctcacacctaaggtcgtaagtcttacGTCTAGCGTTAAAGCTCAGAGT
ttaaactctacccttcgaacctactttagagcacttaaaaatcgattgtg
gtttcaaaacaccccggtgaatttcccttttgtgNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNatcggtatcggtattaggcttccttcgccgacggtattacggta
tttgacccaaaattttgtcggtatgacggtatttaagacccctgaaaacc
ccccTCTACATATACTTTGTCATATAACATTCATAAAACTTAGTACCTTT
AACTTCTTTTTAAACAATCCTTTTGATcgtttcaatgtttttgtgcAAAT
CATAAAGGGTGATAACTAAATGGGtgttttcaactcgcgattatTTAACT
TGTAAAAGTGGACCAACCCTTAGGATCCGTGGTTTCTTTGGTGGGACTTA
ACCTCCCATGTGGCTTTGAGACTTTTATGAGAGGGACCCCGAATCAGgtt
tagaaaaactttttatggCCAAAAGAGTGATACTGCTTGTTGTATAGTAC
AACAGAGTAATCGAGTGTCGAGTAATACAGCCATTTAAAATTATGTCGGA
TTAAGTACAATTGACGTCAAACGTCTAAAGAGTTATGGACCTGACAGAAT
TTTGATCTTCAAATGAAGATATTTCTTTTATATCGTAATTTAAAATTCCC
TTTGTGTCCCTGTATTGTGTTGTTAATGTTTCCTAATTGACCTGTTTTTG
TATTCAAGGAAAGGCTTGCTATTAAAATTGTCGTTTCTCTTCCTCtagac
aaaaacaaaacagtaaAGGGTGATGCTTAGTAACTGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061936TCONS_00061936Clytia hemisphaericatranscript
TCONS_00061937TCONS_00061937Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061937-proteinTCONS_00061937-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:1436931..1446317 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
24.72	25.68	8.68	6.78	24.03	18.11	16.61	17.5	15.99	15.87	18.79	8.07	9.87	9.82	8.07	8.81	14.99	15.93	15.77	19.18	14.16	12.85	16.8	17.01	10.09	13.44	8.81	5.61	10.02	7.83