XLOC_038799 (gene) - C. hemisphaerica

Overview
NameXLOC_038799
Unique NameXLOC_038799
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_361:84770..90808+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038799 ID=XLOC_038799|Name=XLOC_038799|organism=Clytia hemisphaerica|type=gene|length=6039bp|location=Sequence derived from alignment at scaffold_361:84770..90808+ (Clytia hemisphaerica)
cgacttttttgaaatctgtTTATCAACTGAAATCTCTTATGAGGATGTTC
ATTGGTGACCCAACTCGAAGGAGGTAAGTGAACTAAAGAAGACAAAATGA
ATTTGTTGTTGGCCATTTTTTTGGTTGCATTGGCTGCAGTGTGTGGCGCG
GAAAGTATGTGTGCTTCTTCATGCCCTCTTTTATTATTACATTAGGGAAG
CTCACTTTGTTGTGAACTAATCTTTGTAATTTGTAGAGTTCAATCAAATG
AGgtgaaatcatattcaaagagtgctcgataaaaCCAACCAGGAGTAGCA
TATAACATGTAACATATGTTTTCacacagctttttaatttttttagttac
atctgatgattgcttagagcatgaaactccgagttatggatttataaatt
tttggttttgaaatatatttttgattaatttgtAGAGTTCTCACTTTTCA
GTATAAGTTCTCAGCTCAGTATAAGTTCTCAGCTCAGGTAAGATTTCAGC
TTTATATAGAAAATAaccaaatttgttaaaaaataagtCAAAGTAAAACA
TATTTgagcattttcaaaaattagattCTGCAGAAATTCTTCCCGTCAAA
CTAAGCTACCTTTAATGTACTTGATCATTTTGTTTACACattctgaaaaa
acttttctgtGATGCGGGGCCTGTGATGCTATGAGAAAAAACCAATGTGT
TTAGAATGATCATCACATCAGAGAAATCGTCTCAAAGCTAACCGAGAAAT
TCTTCCTTTTCTCTTGTTTAGAATGCAAGGACAAATACTCGAATTGTCCA
ACCGGATTGAAGAGATATTGCACCAGTACTGCTCATCCTTACGTCAAAAC
CAGTTGGTGTAGAAAAACTTGCAAAGATTGTACACCCGCACCCACTCCTC
CGCCACCAGGTGAGACAGAAGTAGTTGCCTTTAATAAACATAGATAATGG
CTTATAttgttttaaacaatagatcttatcggagtttttcatttttctaa
aacagcgatgcattttgggattgtttcgggggcactgcaatagaaatctc
ttaggaatttcTCGAGAGAATTCTATTGTTACACCCCTGAAACAATCCCA
TAACGCATCGCTGTTTTTAAGAATcgaaaaactccgataaggtctattag
tCAATAGATAACAATTTGTAGACAAGATTTGTAAATATACTTTGATGTGT
TCCTCGATGAATTGATTTGGCTGTATTTGAACACCATGTTGATATTCTTC
ACAGAAAACAAATTAGAAAAGAATTCCAAATGGATAGGGAATTTTCGGGG
AATCTCACGAATGAGACACAAGGTACCCAACTTACCTGTGAAGAAAGAAC
TGATGCGAACTTACTCACTCATTTGAAATTTCAGCTTACGTCACTGCACA
ACCAAAACTTTCCAGACGTGAAATGCTGAAAATTAAAGGTATGTTTACCA
TTTAACGGGAAACCAGAGTTATCTTTCATTGGGAACTCTAATAGAATAAA
GTTTACTCCTGCGCTGAACTTTACTTAAATAATTCTTTATGACAATAAGT
CCAGTGCGAGGTCGCCATCGAAAGAAACTGTTAAATatccaaaataacaa
aaaagctatATGGAGTTAATATATGATTAAGAATGGGAAACAAACAGGAA
TAGCAGATTTGCTTTCTCTCatcttcaaataaaaatattgctgtATCCTA
TTTCTACCTTCCAGAAATAACTGAAATCTTAAGCTCAAAATTGAGAACTG
CCAGATattaccgggccacttaatcgctcCATCCGGGCTAGGTCAGTAAG
GGTAGTCATAACATTATTTCAACCATTATAAgcagcaaaaacatttttca
tgcaATCACACAAGAAATAATCTCTAACCAAACCACTGTGGCTCAATGGA
ATTATTTCTCCCATCatttaatttggtaaaaaaagCGTATGTGATGGATA
CTGTAGAATTATGTAGATCTCTGTCACTGTTTCTCTCGGGTGCTTAATAA
ACGGAAGGAGTTAGATATCTAATTATATGGCTAGGAGGTTGGAAAAAGCT
AGAAAAATTATCAAACGAGAGGGGGGCGTTTagtactctaaggtcccgaa
ttaGGGTGCCCGAATAAAAGGGGGTCCGAGTATGGACctttattcgggac
cttagagaaGGCGCTAGCACGTTACACAATAgacaaatataaatataaat
gtTTTAAAGAAACAGTAAGCAAAGATATTCTCattcaaaagctcaaaaat
atatCTTTTCAAACCCTgctaataaattatttttttttattagaaatttg
CTTGGCAGCTNTTTTCAAACCCTGCTAATAAgttattgttttttattaga
aatttgCTTGGCAGCTCATAATGCGAAAAGAGCACTCCACAAAGATACAC
CACCGATGACATATGACATGGACCTCGCGAAACGTGCTCAAACTTATGCT
GAATATATGCTGGAGAATAAACAATGGAAGCATGACCCTTACAGAAAACA
TGGTTATAAAGGAGGTGTTGGTGAAAATCTCTTCTGGTCATCTTCAGCCT
TTAAATCTTCAACTCATGGTGTTAATGCATGGTAAGAAATTTACTCTTCC
CTATGTCTGTAGCAGTATTTATACCATTAAACTTTGATAGTTTATTGTGT
TgggttattttttatttatttttttattaccaACCGTATTATTGGTGTTT
TATTTTAAGGCTGTGTTAAAACATTTACAATGTAAAAAGTGCGGCGTAAA
GTTCAGTGCGAGGAGTTTGGTAAGGCATTTTCAGTGTGATTAGTGTTTTA
GAACCTTTTCAATGAAGGtagtaaaagattttcaaagtgaagagtGTGGT
TAAACATTTTCGATGTAAGGagtgttaaaaacattttcaatgtgaagagt
gtggtaaaacattttcaacgtGAAGAATggggtaaaacattttcaaagtg
aagaatgtggtaaaacattttcaaagtgaagagtgtggtaaaacattttc
aaagtgaaggagtgtcgtaaaacattttcaatgtgaagagtgtGGTAATA
CATTTCaaatgtgaagaatgtggtaaagtattttcaaagtgaagagtgtg
gttaaaaaaatttcaaagtgaagagtgtggtaaaacattttcaaagtgaa
gagtatcgtaaaacattttcaatgtgaagagtgtcgtaaaacattttcaa
tgtgaagagtgtggtaaaacattttcaaagtgaagagtgtggtaatacat
tttcaaagtgaagagtgtcgtaaaacattttcaatgtgaagagtgtcgta
aaacattttcaatgtgaagagtgtGGTAATACATTTCAAATGggaagaat
gtggtaaaacattttcaaagtgaagagtgtggttaaaaaaatttcaaagt
gaagagtgtggtaatacattttcaaagtgaagagtgtcgtaaaacatttt
caaagtgaagagtgtggttaaaaaaatttcaaagtgaagagtgtggtaat
acattttcaaagtgaagagtgtcgtaaaacattttcaaagtgaagagtgt
ggttaaaaaaatttcaaagtgaagagtgtggtaatacattttcaaagtga
agagtgtcgtaaaacattttcaaagtgaagagtgtggttaaaaaaatttc
aaagtgaagagtgtggtaatacattttcaaagtgaagagtgtcgtaaaac
attttcaaagtgaagagtgtggttaaaaaaatttcaaagtgaagagtgtg
gtaatacattttcaaagtgaagagtgtcgtaaaacattttcaaagtgaag
agtgtggttaaaaaaatttcaaagtgaagagtgtggtaatacattttcaa
agtgaagagtgtcgtaaaacattttcaaagtgaagagtgtggttaaaaaa
atttcaaagtgaagagtgtggtaatacattttcaaagtgaagagtgtcgt
aaaacattttcaaagtgaagagtgtggttaaaaaaatttcaaagtgaaga
gtgtggtaatacattttcaaagtgaagagtgtcgtaaaacattttcaaag
tgaagagtgtggttaaaaaaatttcaaagtgaagagtgtggtaatacatt
ttcaaagtgaagagtgtcgtaaaacattttcaaagtgaagagtgtggtta
aaaaaatttcaaagtgaagagtgtggtaatacattttcaaagtgaagagt
gtcgtaaaacattttcaaagtgaagagtgtggttaaaaaaatttcaaagt
gaagagtgtggtaatacattttcaaagtgaagagtgtcgtaaaacatttt
caaagtgaagaatggggtaaaagattttcaaagtgaagaatgtggtaaaa
cattttcaaagtgaagaatgtggtaaaacattttcattgtgaagaaaaag
gtaaaacattttcaatgtgaagaatGGGGTAGAACATTTTCATTGTGAAG
AAaaaggtaaaacattttcaatgtgaagaatggggtaaaacattttcaat
gtgaagagtgtggtaaaacattttcaacgtGAAGAGTggggtaaaatatt
ttcaaagtgaagagtttggtgaaatattttaatgtgaagaatgtggtaaa
acattttcaatgtgaggAATATTATAAACATTTCCAATGAGAAatgtgtg
gtaaaacattttcaatgtgaggAATATTATAAACATTTCCAATGAGAAAT
GTGTGGTAAAGCATTTTCAATGTAAAGAGCggggtaaaatattttcaaag
tgaagTGTTTGGTAAAACATTTCCAaagtgaagaatgtggtaaaacattt
tcaaagtgaagaatgtggtaaaacattttcattgtgaagaaaaaggtaaa
acattttcaaagtgaagaatggggtaaaagattttcaaagtgaagaatgt
ggtaaaacattttcaaagtgaagaatgtggtaaaacatATTCATTGTGAA
GAAaaaggtaaaacattttcaatgtggaGAATggggtaaaatattttcaa
tgtgaagagtgtggtaaaacattttcaacgtGAAGAATggggtaaaacat
tttcaatgtgaagaatgtggtaaaacattttcaatgtgaagaatgtggta
aaatattttcaaagtgaagagtgtggtaaaatattttaatgtgaagaatg
tggtaaaacattttcaatgtgaggAATATTATAAACATTTCCAATGAGAA
atgtgtggtaaaacattttcaatgtaaagagcggggaaaaatattttcaa
tgtgaaAAGTGTGGTAAAAAGTGTGTGATGGAACATTTTCAATAAAAGGA
GCATTTACAAAGGTGTGGcgcaaaataatttcaatatgAAGCAGTATGGT
AAAAGTATTTTTAAGGCGAAACAAGcgtagaaaaataaataatatttgaC
ATCGTATTAAACAAATCACACATTTGGCAAACTGTTGAATAAACAATCta
atctttattttgattttgctcAGGTACAATGAAATCAAGAATTACAATTT
TGGAACTGGCAAGTCAAACGGTGGAGTTATTGGTCATTTCACACAATTAG
TTTGGGATTCTTCAACTATATTGGGCTGTGGTGTTGCTAGAGGAACAGGT
GGAACTTACCTCGTTTCGAGATATAGACCAGCTGGAAACTACCGTGGAGC
GTATTTGAAGCATGTCCACGAATTGAAGCCTCAACCAGGAATTGTCTCCG
ATGTGGATGCAGTTTTGTAGAAACTTTGGTGATTATTGGTAAATCTAACA
TGGAATCATTGTGTTATTTTCAAGTTATTGATCATTTATTGGTAGAATAT
AGGATAAAGATTAAAGTTCAAATTGTATTTTTGATCTATCGGGCAGGGAT
TTTTCTTGTGGGAGTTTAtttattcattgttttttttttcatttgaccca
gaagtcttttattttttaatatatattGATCTCATTTCTGTATTATTTAC
ACATtttatttaatgaattatataaaaacttttcaaagtagTTACGTGCA
AAATGGACTTCCGTTTTTTTGACGCTGTTTAGTCGTTTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061854TCONS_00061854Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061854-proteinTCONS_00061854-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_361supercontigscaffold_361:84770..90808 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.11	0.04	0.09	0.04	0.05	0.16	6.98	6.26	115.34	41.56	105.14	141.3	20.11	16.75	76.12	76.56	2.37	2.16	17.24	21.03	1.28	1.29	0.61	0.95	2.28	2.29	0	0.33	1.31	1.33