XLOC_038662 (gene) - C. hemisphaerica

Overview
NameXLOC_038662
Unique NameXLOC_038662
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_36:231271..240719-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038662 ID=XLOC_038662|Name=XLOC_038662|organism=Clytia hemisphaerica|type=gene|length=9449bp|location=Sequence derived from alignment at scaffold_36:231271..240719- (Clytia hemisphaerica)
TAATAGACCTTATCGGAGTTTTTGATTTTTCTAAAAAAGCGATGCATTGT GGGATTGTTTTCTATTGTAATACACTCGAAACAATCCCACAATGCATTGC TTTTTTAGAAAAATCAAAAACTCCAATAAGGTCTATTTGCTGTGTAAAAT GCATTTTTCATCTAAGACGAAAAACCGTGCTTTGACCACTATGTTTTATT CTTTCAGCAGGGAGAAAATGAAAAAATATGTTTACTGTTGGTCATAAATT TGAATCGTTTGAAGAACTACAACAACAGTTGGAACATTACAGTGAAGAAA CATATACTCAATATTATCTTTCCGATAGTAAGACATGTCAACGCACTAAA CGATTCATTAAACCAGAATTGAAATACGTCAATTGCAAATATAATTGTGT CTATGGTGGAAGGTTCACAAGAAGAGGTTCTGGAGTTAGGAATTATGTGT AAGAATATCTTTTTTAAATTTTATTGTAAGAATGATTACTCTATAGCAAG AGTTATGTTTTACTGCGAAAACCCCCAAAAATAAAACCGGCAAAATACAA ATTCTAAGAGTAACAAAAATTCCTTAGGAATCTAAAAGATTGGAGATAAC AAGAATTGGGCTCTTCCAGAAAATTTTTGTGGGAGGGGGTGGAGGATATA TTGAATAAATTGTCCGGGGGTATTGAAAAATCTAAAATTTTCGCCTTGTT TGGGGACAAAACTGCTCTGTTTAGGGGTAATTATGAATGTCTGGAGGTCA ACTGATGCTTGTCGAGGGAAGGGGTAAAATCTGTTGTCCGGGGGGTCAAA AGTCACAATGTCTGGTGGGGGTAATAAATTTCCAAAAAATGTTNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCAT ATTCAAATTTTTAGATGATATGATACTGGACTGGTGGACCTTTTCGTATC AAAGGAATATATCTTTCAAATTTCTTTTTAAAGCTTCATATTCACCTAAT TTCAGGTCAATGAGGGAAAAAGAAAATTCATTCCCCTTGAAATAATTGAG TACTTGATGATTGTATTTCAATTTTCTTCTTTTTAAAGATTCCCTTGTTA ATTTCACGTCATCGAGGGAAAAATAAAATAAATTCCCCTTGAAATACTTG AAAAAACACCTTTTTTTGTACCTGGGATTTGTATTTCAATTTTTCTTCTT TTAAAAGATTCCTTTATTGATTTCAGGTCATTGAGGGAAACGCAGTGTCC AGCATTTATTTACATTCACGCAACGAATGAAGGAGATTTTCTAGAAGTCA CTAGATCTGCTTTAGAACATAACCACGAAATTAGCAAAGTGAGTTGACTC GATAACATAGTTTTAATTTCAAAAGTTAAAAACGGCTTTTGAGGGAATTT TACTTTTTAGTAGTGAGATGGGAAAGTGCTTTAGGGGCTGTTCATATAGA GACTTTTGAACATTATGTGTTAGTGATCTATTTTTAGCCATTTGGTTCGT AAAAAACTGTGACGCAACTTTGAAAATCCATCCCAGTTCACCTAGCTGGA GCAGCCTGCCTCCATATAAACAGCCCCTTAGGCGTACAAACTTTGGCCAT TTTTTTGCCCTCTTTTGCGAATCTAAAAAATCCCTTTGAGTTTGAAATAT CTTAACATAACGATTCTATTTTTATGATCGCGAAAAATACTTTAAAAGAA AATGTACATATAAATACATCGAATTCTGCGATTGATATTAAAATTTCAGT ATGATCTTTAGACCTTCGGAAAACATTTTTTTAGAAAATTTTCACTGAAA GATTCTTTTTCATTTTTCTTTCTTTACAAAGGAAATATATGAACAATCAA GACCAAGAGTTTTAAAGAGACGATCGGAAACCATACCCGAAGAATACAAA GCAAAAATTGCAAATCTTATCAAAATGAAAGCTGATCGAAAGGAACTTAT AAAACAAGTTGAAGAAGAAACTGGAGAGAAGGTCCGAGCAAGTGATCTCG CTAATTGGGTTAAACGCGAAAAGGAAAAAGGTGATTTTTATAAGAAAATT AATCTTCATTCATCATTATCCTTCTATCTAGGTCCCAAAGAACCTAGATC CGAATAACCCAATAGACCTTATCGGAGTTTTTGATTTTTCTAAAAAAACG ATGCATTGTGGGATTGTTTCAAGTGTATTACAATAGAGTTCCCTCGAGGA ATTCCTAAGAGATTTCTATTGTAATACACTCGAATCGATCTCACAATGCA TTGCTTTTTTAGAAAAATCAAAAACTCCGATAAGGTCTATTACCCTCCCA CCACAGATCGCGATCAACCATTGCAGTACCCAGTTCCCCAATCTAGCCCT GTTCCCCGTCTCAAGATGTCAATAAATATGCGCTTTTTCTAGTGCTTTGG GCCAACAGGAAACCAAAATGAATCTTCTATATACCCTTCAAATCAAACGA CCTTTTAGGCTTTACTTTTCATCTCTTTAAAAAAATTTAATTGAAGATAC GACGATTTTGAATCTCCGAAAATGAGAAAAAAAAATTTTTCTGACGTTGA AAATTATATTCATGATCTGCACCATTGCAATGTCTATGCACCCAACAGCT GTTTGGTTGAAAGTGGCGTATTGACTTTTTTACGTCGCTTACAACAAATC AGCTGTTGGGTCCATGATGTAATGTAAGAAGACATTGCAATGGTGCATAT CACGAATTGAAATATTGAAATTCTCACATCAGTCTCCTCCAAACCATCTA AATGATCGTTTTATAAAGTCTTTTCATAATATTTGTATTCTTTTTGCCTC CATTCCACACCATTAAGAATGATATCTTTAGCTCTCGTTTATCATCTTCA GGCCAGAAGAAGAGAGAGGAATGGCTTCAAATGACTCCCCAACAAAGGGC GGAATATCTTCTGAAACACACTGCATCAAACGAAGATGGTTCATCTTCAA CTGAGGTCACCGAGACGATTGAAGCCTTGAAGAATCTGTCATCTCAATCA GAAGATACGATTGGTATTGATTCAGTTTTATGTGAATTAATAGTGGAAAT TTTTAATGATTTCCAGTGAAAATCAGAATTTTCTTATTTTGTAAGAAAGG TAGAAAGAGGAAAAATAGAGAGGTTAGAATGTCGAATTTCTTGTACAGTA GACTCTCGCTTAAAATCGAACTTTTATTATTCTACTTATTCCCAGTCCCT GTCAAGAAGAAACCCTCTTAAAATAGTTTCTATAATTCCAATCTCTCTGT AATTCGAACAAGTAAGATTCCTCGACAGTCGCTGTCAAGAAGAAACCCTC TTAAGATACTTTCTATAATTTCAATCTCTCTGTAATTCGAACAAATAAAA TTCCTCGTTTGAGTTCGAATTACAGAGAGCCAACTATTATGATTTTTCCA TTTTTAGTAATCCCATGATATTTTTCAATATCTTTTTTATTCTCTACATT AGACATGCAAATTCTGGCTACTTTGAACAAATCTGGTTCTGCTGTACAGC TGATTCTTAACCCTGAAGAAACAAGAGACTTGGAATTTACCGAAGAAGAA ACAGGTATTTAGCTTATGTGGATGGGAGCAAAGGGCCAAAAATAAGTAAA AGTTATCGTACAGTTGCGAGTGCAATATGAGAAATATTTTACGAGTTCCG AGATTTTTCCGTACAATATTTTCAGAGCCTTTAGGCGAGGAAAATATACG GAAAAAATCCGGAACGAGTGAAATATTTCCATATTGTACGTGCAAATGTC TGATAACTGGTTTATCGGTGACCCAAAAAATGCACTTTTTGTGTTGGAAA GCGCAGGGCACTTTTGTAGCAAAGTGACGTTAGATTGCTACTGCCGCTAC AATGCAACAACATCTTTTCGTCAATTTATATTTTTACATGTAAAATACAA GATATATTGTACTCATTTTAACCAATCAGATTGCTGATATTTTTTGGATC GCCGATAAACCTCCTTATCTTTTCTTCTTAGGAATTGAAATCAAAAATAA TGTCTGCTTTTTTGCTAAGCAAGTTTTTAGGTGGTCTATAGCATAATCAA GATTTAAGAAATATTCATAGATTGTTGTTATTATGTGTATTTTTGAAGGA AAAATAAGTTGATGATGGATAGGAAAAGGAAAGTTCTCGTGCTTACAGCT TATAGATTTCTTCTTATTGTAAGTCAAATATGAAAAACCTAAGATTGTAT AAACCAAGAAATTAAAACGTAAATAAAACACATTTTTCTTTAAAGATCTT TATGAAGTTTTCTTATTGTTTTTTAATTACATACCAATCGAATAGGAACC ATCATTGAATCGGAACCAGCCGAAGTAGATTACGATACTTTCAAGATCGG TAACAAATTCCGCTCTTTCAAACTCGTCCAACAACTCGTGAGACGTCTCG AAGAGGAAATATATACCAAATTCTACGTACGTGACGGCCGTCAAAGTTTC CGTGGCGAGGGAAGAGGGAACGTCGACCCTACGTTACAATACGCCTACGT TAAGTTTGGTTGCTCGCATCTCGCGCCACACGCGGACGGGAAAACGAAAA CCAAATTGAAGTAAGATTGAGTTCTAAATTTTTCATATTACATTTACAGT TGACTCTCTCGAATCCGAATCGGAATCGGAATCGGATTCGAAGTATTTAT TACAGGGTATTTTCCAAGCACTTTTCCTTACCACCGTTTTGGTCTGAATA ATTGAGTTTCAATGCAGTGGTGTATTAAATGCGGTCCACCATGGTTGGGT GACGAAGAGGATTCTTGCCCTCTAAACGTCCTAAATAAGTGTTTTCATGC ATCCTACCTAACCTAAGACTTTCACCATCAGCTGGGCAAAGTAAGAGGTA TTTCTTGATCAACAGGCGTCTTTTGAAAATTACATGTTCTAAAAAGTGTT TGCGGTGAAGCCACCGTGAATGAAATTGAATATTTGCAGCCCAGCGACGT GAAAGCTCGACTTCCATGAAAAATACTTAATTTCTTCAGCCTTCCGACCA AAATGAATAAACATCTGATCAACCAAGCTTTGTTTTTAATTCATTTTGAT CCAGGGGTGTAAATATTGCATAATAGTTGAAGAACTTTGATCGGATATTT TTGTACTTCTTAGTTTTTATTGTACAGCTCTAAAATACTGTACAGGACAA AGTTTTTTTTATTCATTTGGTTGTTTACCTTACAGGAGAGTGAAGAATTG TCCTGTATCAATCTCGCTAACAGGGAAAGATGGAAACTTCTTGGAAGTTG TGAAGACTTGTTTCGAACACAATCACGAAACAAGCAAGGTAATATTGGTA TTAAGGAAATCTCACAGTAGGTACGAAAATTTCAGAACTTTTAGGAAAGA GTTGTTTATCTCATTTCCCAGGCTAGAAATAGTTCATTAGAGGAATCAGT GTTTTAAAAGTTCTCTCGTCTCTGATGGATTTCCGTCTCATTGAAAAATA TATAAAGAGACTTTTCCGTCTCAAAGCTCTGCATGATTCACCAAATTTTT AAGAATATGTGCTAATTTTCTGTGAAAGATCTATTTCCTGTCTCAGACGA AAAATGTTTCAATCTTGCAATAATTGAAGCTGAACTTTTCATCATACCCA TAAAGTCCATGCTCCACAAAAGCCAGGTGTTTTAAAAAAAAAACTTTCTT TTTAACCTTTCCATGTTGGTCAATTTTAGGTGAAGAAAGATTGGTGCGAA AACAAGTATTTTGCGAAACGAATACTAGTTTTATTACTTATATATAACTT GGTTTTATATTTTTTCCACAGGAAATTTACCAATCACATCCTTCACACAA ACGAACCAAACCGACTTTCGAGAAGAGAGTTTTCGAGTTGTTCAGTATTA TCAGTGATTCGGAGGTGGTCAGGAAACTACTGAGAGCTGAAACAGGGGTT GATATGTCTCGAGAGAAAATTGACAAGATCAAAAGTCGAGCTCCCAAGAT TGGCGGAGGTAAGAACGTCTTTGAACCTCTCTCTAGTTGGGCCACTCCAT TTTATATCCATACAAGGGGTTGAAGAACACTGCCAGGGGGTAATTCGAAG AAAAATTTCCCAGGGGTCTAAGGAAAGTTTCTTTATTTTCCCAGGGTGTA GAAAATTATTCCAAACTTTTCAGGGGATAAAAAACTGGTATTGCCTATTA GTCCGTTCACCTTCACTTTTAGGGTACGAAGAAGAATTTCTCAAAGGGTT TTTTTTACAAATTTTGCCATTTTCAAGGTAGTATCCACACATTTTCATGG ATAATTTTTTTGCTTAAAAAGGTTCGTCCACCCCCTGTATGGATTTTAAA TGGGACAGCCCATTCAAACCTCGTTCCTATATTTCGATCTTAATCGTCGG TCCCTTCAGCTGAAAATCGGTATAAGACACTCCCTATAATTCGAATCGCA CTCAAATTCAAAGAAGATTCCATGTTCCTTGAAATTCGATCATGAGAGAG CCAGCTATGACGCAAGCAGACTGGATTCGAATTAATTTATATGCATTCCG TAAAAAGTCAAAACTTTTTCCAAAAGTCTTTTTGAAATTTTAGCCCGTAT CTAATGCCTTATTCCTTAGATAAACGATAGTCGCTTATTTTTTTCAAACC TAAACTACAGAAACGAGATCCCATCATGAAATCTTTCTTCTTTCTAAAAC AAAGTCAAAACTACAGAAACTGATCCAAACCTAATTTATTCTTCTTTCTA GAACAAAGCATTTATCAGAACTTCGATTTACCTGATGGTTTCACGTACGT CAACCAAAGCGCAGCGTCCTCGATATCAAAAACGCCGTTAAAAAGACCTC GTCAGTCAGAAGGCGCCAGTCAAGGGTCTTCTGCCGCGAAAACCACGAAA TATCTGTTGGTGGGGGATCCGGCAACGGCGCCTTCGAAACCGTTTAATCC TGGTGCGAGATTGGAGGATTTGAAATATCCGCTGAGTCAAGGAGGTTCGT TTGAAACTTAGCTCTGTTAAGATGGCCGATTCCTACACTGTCTATTCTAA TTCTGAATTAAAGTGGACAGAAAGTGGGCACTTATTCTTTTTTGCCTATT TTAGCTAGAGCTTATTTTTTCAATTTATTCAACATAAATTGACTTTCTAA TAATAACCAACAAGCGGACACTAGGTTTCTGCTCATTCTTATAACGGAAA TTGCTCTTTATCCAACTTAAAACAAAAGCCTGTGGATGTGTTTAACTTTT TAAGTCTATTAGAATGTTCTTAAAATGTTCTTATTTTCACCATCTTGTGG GTCTTTTAATTTGTTCTTATAACATTTTTATACTTTTTCAGAATTTCAAA GACGCATGTTGACATTATTACAAGAAACACGAGACGCAACATTGCAAAAT GCTTGCCGTTGTAAATGTCCGTCCAATCAAAACGAATCTTTCACCAACCA AAGCGACACATTAATCGATCAAAGCGAAATATTAACCAATGAAAGCGAAT CTTTCATCAATCAAAGCGAAACTTCGACAATATCCAAAAGCGAAGGTGTT GTCTTGGAAACAGAGAATCAAACGCAGAATGATACTACAAACATTGAAAA CTCGCCTCCTGGAGTTAGCGAAAGTATACAACATATAAATATACAGAAAC TCGATTCCAGTGAAAGTTTATCAGGCGATGAAAGTTTAAAACAAGAAAAC TTGCAAAATGTCGAACTGTGGTCTTCAGGGACGGAAACAATAGAAATAGT TATTGAGAAACAATCAGAGGATGAGAATGCTGATTCAGCACAAGAGATTG AAGATGTGATTGTAAACAATGAAATGGAGGAAGAAAATGAAGAAATTTCA AAAGAATCTTTTAACGAAGTGGTGATGACAGCAATTTTTAAAGATGCGAT TGAAAAGTGATTTTTTTATTGGTATTCATGAATATAGCTGAGCTGACTAG ATCTGACTAGTGAAAGTCGAATTACTGTTGATCAGAAATTTAGCAATTTG CAAAGTTCTTTCGTCTCAGCCAAGTATAAACAGAGGCTTTTTTGCATCAA AATTTAAAGAAACTGTCTAATTTGTTTATCGAAAGTCCATTTACCGGCAT AAACAATAAACGGTGCTTTGACCGCTGATTAAGACAGTTATCCTAAATAA AATATTCATGAAAAAGTTACTGGTTACTGTGACCTTAGAAAATGTCAAAT CTTTAAATAGCTTACAGTTTTTACGGTGAATTCATCCGGTGTTTTCTCTA AAAAATCTTACCGTTGCTTTCACATCGAACGAGAACTCGTAGAAATATCT TGTGTTGTTTGTGACGTCAATGCTTGTAAATGTGAGATCAGTATCTAAGG AAGAAGTAATTTAATGCATCTTTTAACGCTACCGTCAAAATGGAACGGGA TAACCAGATAAAAAGTAAAACTTAGCTCAAAGATTCCTTCCATGGTCCTT ATAAGTAAGACCACCAAATATTTTTAAGAAATAACATATTTTGAAGAAGA TATATAAACGGGTTTTAAACTTAAAGGGATTTTAACCAGATAAAAAGTAA AACTTAGCTCAAAGATTCCTTCCATGGTCCATAGTAAGACCACCAAATAT TTTTAAGAAATAACATATTCTGAAGAAGATTATGACGATTTTAATATCAG GCTTTCAAATTTCATTTTTTATTTGGTTATCCCTTTGACCGAGTTACTCT TTGGAAGGGTAATACAGCTATTACACTTATTAAGCCTGGTAATAGAATGC TCCTTATAAGACGATTAAATTTTAATTTACCAGGGCTGAATCACGTCAAA TAAACTCAAGGATGCATAAATACAGACATTGGCGTTTTTCATGATATGCA CCATTGCAATGTCTTCTTACATTATATCACGGATCCAACAGCTGATTGGT TGTAATTGACGTATTGACTGATTATACGTCACTTACAACCAATCAGCTGT CAGGTCTATGGTGTGTCGAAGACATTGCGGTAATGGCATATGAATTCAGT GTGTCAATGCAATGTAAAATGATGTTGACTAATAAAGGTAGGGTTGAAGG TGCATTGTTGACATTTTTATTTCATTTTATCCTAGTTGTTTTTATTCTAC TAACTTTTTAATGATTTTTCGTAGAATTCATTTATTAATTTTTCGAAATA TAGAAACAATGTTTAAAATTAACAATATAATTTTGTCTCTGCCTTTGAGA TACCGGGTGTTTCAAAAAACTCTATTTTTACCTTTTTATGATAAAAATTC ATAACTAAGGTCTGTCCAGATATAAATGGCAGTGGAAACAAGAATGCCTG TAACTTTGGGACAAGCTGGAGTTTTTACAAGCTCTTTTTTGATTTGGTTG GTCGTTAACCAGTAATAAAACAATTTTGTTACTTTTTCTAAAGAACGCGT CATCTCTATCACTTCAAATGACCAATTAGTGAAGTATCTTGTAAAAACT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061652TCONS_00061652Clytia hemisphaericatranscript
TCONS_00061651TCONS_00061651Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061651-proteinTCONS_00061651-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_36supercontigscaffold_36:231271..240719 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.04 4.73 2.03 1.4 38.56 29.38 25.27 25.34 11.18 12.22 9.8 8.43 7.95 8.7 9.18 8.86 12.24 13.5 5.25 5.31 7.35 7.17 14.67 13.83 10.83 14.02 5.32 3.8 10.26 11.51