XLOC_038600 (gene) - C. hemisphaerica

Overview
NameXLOC_038600
Unique NameXLOC_038600
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_359:98429..101768+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038600 ID=XLOC_038600|Name=XLOC_038600|organism=Clytia hemisphaerica|type=gene|length=3340bp|location=Sequence derived from alignment at scaffold_359:98429..101768+ (Clytia hemisphaerica)
AATTgtgtttaaaagttatcttaaGCTTTTTTTTGAGTAACCGGTATTta
caaaatataatatataatgtaTACATAGTAGCATAGTAgtatatttacaa
aattaaattcagCAAGACTTATAAATTAATGATTATTGCGGACAGTCACC
TGGGGAACCAAAATCAATGCgtttatctttttttcagaaaatctctTTAA
CCTGATCTTTAAATCCACGGTTAGCAAATGCATAGCAAACGGGATTAAAA
AGTGAGTTCAGCCAACCAAAGATGTAGCAAAATCTCCATAAAGGCTCTGG
TAAAGATGTCTTTAAGATTGATCTTGCTAGTACAGTTATATGATATGGAA
ACCAACAGATAAAAAACGCTGTTGAAACCAATAAAATCCATTTTAAAGCA
CTCCTTTTATTCTTTTGTCTACATTTATCCATTTTTCGTTCACATGAAGT
CTTTCGTTCCCCAAAAAGGGAAATATTGGATGTTCTATCACGTTTTTTCC
CTACTGGTGAATTAAATCCAAGTTTCATATGAAAGTCTAACGTATTTAAA
GTGAATCTTCGTTGTCGTTTTGGTGCTGTTTGAGTAGTAGTAGATTGTAA
CTCGTTATGGTTCTCAAGCTTTGTCGTCGCAGTGGCAGATCTTGGTCTTG
GTGATAGCAATAATGTTTCTGAAAGTGTTGAGAATCTCATCCTTTTACCA
TCTTTAACAtgtttttcttccttctttACGTCTATCTTATCCAAAGAGTT
GACCCGAGAATCTCTTTGGCTGGTATTATTAACACTATCTAGAGAATCTT
CCATAGTTAAATTGATGTTCTCGTCCTTTATATTAAACCCCTGGTTAATA
TGTCCTTTCTTATTACCAAAGTCATCTGCAATAGTAGAAAGTGAGGCTAG
ATACTCGACTGCTTTGTCTGGTATAACATAGATTTTCTTTTCACCTCCAC
TGATTCTTGAAATCCGTCTCCATATACATAAATAAATTACCAGTAATATA
ATACAGGGAGCGAAATAGCTCAAGACTACAACTGTAGATGTTACAGTAAt
atcattttgatagaaatgtACGTAACATTCGCTCGATGCCATGACTCTAT
CAGGGTCTTCCTCAGTATAAGGGTAGATCAGGATGGGTAGCGGCCAGACC
AAAACTGGTAGCAACCATATAAGAATCACACATCGTTTCATGAATCGAGC
ATCGCATTTCACTTTATGAGTCATCGGGTAAAATATCGATCCAAATCGAT
CAAATGCGATAAAAATGAGACAAAAGTTCGATGCTGTTCCTATATAGTGA
TCTAAAACCAACCATGTGTAGCAGAGACCCCGGCCTAGTGGCCAGTGACC
AATCATTAGTAAAATAGTATAAGGATTTATTGAAAAACCCACTAGTAGAT
CCGCTACAGCTAGGGAAagtataaaataatattttggtttttgtagtttt
ttttttgttttgaaaacgtaGATGACAATGGCGTTTGGGATTATGATTGA
AAGACTCATGACGACCAGACCAAATCCAATCAGTGATAATTCTAAATCTA
TAGTTTGATTTGAGTTCATTTCTTCGTTATTCGATGTTGCGTTcgtcatt
tttgttttgttgttgttactttcctaaaaaacatcaaatgttAAGTTTAA
AGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTGTTCTCGTCCTTTATATTAAACCCCTGGTT
AATATGTCCTTTCTTATTACCAAAGTCATCTGCAATAGTAGAAAGTGAGG
CTAGATACTCGACTGCTTTGTCTGGTATAACATAGATTTTCTTTTCACCT
CCACTGATACTTGAAATCCGTTTCCATATACATAAATAAATTACCAGTAA
TATAATGCAGGGAGCGATATAGCTCAAGACTACAACTATAGATGTTACAG
TAAtatcattttgatagaaatgtACGTAACATTCGCTCGATGCCATGAAT
CTATCAGGGTCTTCCTCAGTATAGGGGTAGATCAGGATGGGTAGCGGCCA
GACCAAAACTGGTAGCAACCATATAAGAATCACACATCGTTTCATGAATC
GAGCATCGCATTTCACTTTATGAGTCATCGGGTGAAATATCGATCCAAAT
CGATCAAATGCGATGAAAATGAGACAAAGATTTGATACTGTTATTAGATA
GTGATCTAAAACCAACCATGTGTAGCAGAAACCCGAGCCTAGCGGCCAGT
GACCAATCATTAGTAAAATGGTATAAGGATTTATTGAAATCAAACCCACG
AGTAGATCTGCTACAGCTAGGGAAAGTATAAAATAATATTTGGGCttttg
tagtttttttgttgctttgaaAACGTAGATGACAATTGCGTTTGGGATCA
TAATTGAAAAACTCAAGACGACCAGACCAAATCCAATAAGTGATAATTCT
AAATCTATAGTTTGGTTTGGGTTCATTTTTTCGTCTATAGACAGGTTATT
TGATGTTGCGTTCATCATTTTGGTTTTGTTACTTTCCtagaaaaaaacat
caaatgttAAGTTTAAAGAACACCATTTACAGGGaaattaaagtagtaaa
atgtaaacattgcaccagccacgtgtcattaaagagaacaattaaaatca
cgtgtccaaaacaaacttgtaaaacaattgaacaatcaaaattagccata
tttggtttcattttttattttgacatgtgacatttgttttgattttgtat
ccgctgcatacagtttgtttacaaatttcgcaagtactttaatgtccctt
taacacATCTCCTACCATTCTcctaaaaaatactttttcacaTGAAAGAA
AGAACAACTTTCTCCTGTACCACGTAGCGTAACCAAGGGGCGTGCAAAAT
AGACCTTatgggagtttttgatttttctgaaaaagcgatgcattgtggga
ttgtttcgagtgcattacaatagaattccctcgaggaatt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061518TCONS_00061518Clytia hemisphaericatranscript
TCONS_00061519TCONS_00061519Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_359supercontigscaffold_359:98429..101768 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.2	0.8	0.67	0.63	2.49	1.67	1.57	1.4	1.02	0.95	0.32	1.6	0.5	0.56	0.2	0.28	0.22	1.88	1.88	3.31	0.28	0.6	0.84	0.76	0.3	0.23	0.31	0.2	0.46	0.32