XLOC_038380 (gene) - C. hemisphaerica

Overview
NameXLOC_038380
Unique NameXLOC_038380
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_354:719900..729616-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038380 ID=XLOC_038380|Name=XLOC_038380|organism=Clytia hemisphaerica|type=gene|length=9717bp|location=Sequence derived from alignment at scaffold_354:719900..729616- (Clytia hemisphaerica)
GGTATTACACCAAACCAAAAGAAGATGAATAATGGAAAATTGTTCACGTC AATGGAAACCTTTTACAAAGTAACACGAATGATCTTGGAGCTGCAGGAAG ACGAGACAAATATGGACACTTATTATCATGTTCCAAAGACTGTGAGAACG AAATTTCTTTCTTGTTTTTTTTTTTACATAATAATACTGATAACGTGACT GTAACATCAAAAATTATTTTCAGAACCTCTTGTTAAACTTGGCCTACTAG TATATTAGTCAGTAATACGTTTTCTGCTTCCCTGGTGTCCCTGGCTCCTG TAAACCTCCTGGGACGAGAAGGAGGAGGCACTGAGGCGAAATTGAGCACG GGGATGTGTCGCTGGTCAGGCTTTTCTCCAACTACACCCAGATCTAGAGT CGTTAAATACCAAAATCGAGTTTTCGAGAATAATTCCGGAGAGAATTTAC AGAAAATTTCAGTTCAAGTAAGGTAAGTTTTTTAAACTTTAGCGGCACTC CCATCGGTAGGCAAGGGAAGTAACCCTCGGGCAAAATTGTCTCTTTCATT TTCCCTATATAGTTTACACTCAAGTTATCTCCACCAAAACTGGTGGTAAT TGCCTGGAAAATTTCTCTTTCCACTATTAGCACTGAACTTTTTTTTCCTT TCTTTGTTTTTATCTAGGAAAGTGAATGTAGAAACATTGAGGATTTAAAG AAAACTGATTGTTTGCCGTTCGCTATTGAACACAAATTGCAAACTTTCTT CAAATTAATGAACACCATCCTCAACTGCCCTTCTGCTTCAATTGATCAGC ATGGATTCTGTCAGGTATTATGTTAGTTCATTACAATGCTAGCCTTATTA ACTCCCGCTGCCAGTCCTTTTGAGTAATTCATAAAGTAGATTTTTCATCC TATCCCAATTTTACTTAAAATCGCATATCTTTCTGTTCGCTAAAGTTTTT ACATCTAAAGTATTGCGATACTAAATTTACATTACAAACCTCAAACGAAA TCGTGGCAAAATGGCGTGAACTCAGTATTGTGAACTTCTTTATAGATCCG TCTATACTTAGCTTCAGAGTCTATGAATCTTACTATTGGGTGTCAACCAT TGAGTTTGAAGCCCGAAGGACTAGAGTAGAATCTCTAACCTTTTGCAGGC AAGAAAAAGTGAAGCCACTTATTTCTCATCCAGAACGCACCTATAACGCG CCGCAATCATGACAACGGATTGCTTATAGCGGTTCCATTTGTTTTTGAGG ACTGCATTTTTAAAATCTAGTGAGAGATTTTACTTTCAACCCGGCGTTTG TGTAAAAACCACGCGCGGTCGTTCTGGATCGGAAATAAGTGGCTTCATAT CCCATCCAGGAGTCTCGAGTCTAGCCCTTCGGGCTTGGAAGTCAATGGTG TCAACCATATTCATATACTTTCTAGAAAAACGACATGTTAAACTCAACAT CTACAGACGATGATGTATGTTATTTAAATCAAATTTCCGGTGATTTCTTG GTCCAAGGAAATAATCATAACAAAACTCTAATGATGACGTCATTGGCTGG CCTCTATTTCACGAGTTGTCTACCGCCAGATGGTATGGCTACCTTCTCTA CCGCTATTGTAAGTTCATAGTGTCCTAGGGCATGATTGTCTCTTTTTCAT TTACTATCCCCTCTTCCCCGTGTAGGTTCAAATTTCCCAATCTCCCAATT TAACTGAAAATTATTAGATTTGAATGGAAGTATTTTTTGAAGTGTTTTTC CCACCTTTGTCAAAAAAACTGCACTAATTACTTCATTTGTTAAAAGCTAA ATATTTCTCCCAACTGGAAATTTTTAGCCCCCCCCCCCTATGTCTCGATT TTCAAAAGTTATTTTGAATGAATTTCTTGTTGATGCTCTGCTTTAGCATT TCAAGGATTGTTGTTCTCAAAGAAAATTGATATTGTTCCTATTATTGTAA TACTAACGATTTTTACTATTTTTCAGATGAAATGTTCATATTTGGGTGTA CTTTTTGGGCACCTGGGTGACATTTTTGGTACTGCTGATGGCATGACACC TTTCTATGACTTCAAACAAATGATGCCTGAACTTTTCCCCAATGATGATA ATGTCAAGGTTGCCGTCAGGGAACAATTCCAGGTAAAATTTCGATGTTTC TCTCTTAAACTATAGTCTACTGAAGTGTCTAGTGGAATCGACTAGGAGTT ATTGGCAGGACTACCTATCTATAGTACCTGGAGTTGAAAAGCATAACTTA GAAAACTCAAACAAACAGATATACCTTTATGGAAACAAAAATATTACCCT GATTTTTTTTGCCTTCCAAAATGAACTCATGTTTTCTCAAAATCAAAATG TTTAGAGTCATGTCAGCTAATTGCGACCGACGGGTAATAAATTGCGAAAA CTTTTTTCTATTTTCAAATGAGAGAAAACCACCAAATTAAAAAAATTTTT TTAACTGTTGTAAAGACCAACTATCCTAGTGTACTTTCACAAAATTTCAT TCACAGAAATCTTTTCATCTTCGAGAAATGTAACAAAGTTTGCATCACTT TGAAAAAATGCACAAAAAAGATGAAAAATTGTCTTTTAAACATTTTGGCA TTTAAAACGATCTTTCTCAAAAATGGTTTGCTATTTACGTCAAAAAAACG AACATCGTATAGGTAAATATGGCAGCTAGCAAAATGTAAGTTTACTTTTT CCTAAAAGTTTTTTGGTTTTTATAATTTGGTCAATGAACAAGGGTACCCA TAGCGCCACTTGCGCGCGCTGCGATCGCACCTTTTGGCTTCAATCCTTTT TGCTTGGAAAAAAGATTACGTCATAAAAATGTAGCGCGCGCTCGAAAAAA AAATTGAATACATTTCAACTTTTTTCAACCGTTACATCAGATCGCGCCAA TGGAATGGTTTTATTTTTCTTTTGACCAATTGCGTGGAAGCTCTGATTGA AAAACTGCGATCGCAGCGCGCGCAAGTGGGGACCGGCTTTAAAAGAAAAA ACAGCCTTCTATTGCACATTTCATGAATCGAACTTTGATCTCTAATCGTT CGATTAGCCTAAACCCACCAGGTGCGTCTTGCAATTCCTCCATTGATAAC AGGCATGCGTAATTTGTTGTTCTTATAAACCACATGTAGTTAATTCCCGT GTTTAAAACAAAGAAGAATAAATCCGTAAGGGTGGTACAGTAACTTTCGG TCGGGGTTGTGGACGGCGAAATATAAAAATTTGTCGTTCTTTTTTGTCGT TCTTTATGAAGTTTGTCGTTCTTTATGAAGTTTGTCGTTCTTTTTGTCTG TTTTTAGTAATGCAGGATTTGTTAGAAAGACCTCCTGCCATATCTCAACC ATATCATAAAAATTGACGTCATAAATTAGATCGAGAACATTCCAGTGTAA AGGTTTTTTTGATTGAAATGGAAAAAATCAAAATCAACTGAAAAAAAATG ATAAAAAGAGAAAATATACAGGGGTCCCTTTTTACCTTTCTCTTTTTCAA TATACCCTATCATTTCTCGTTAATAATTATTTCGGAAAATGTAAGACTCA AATTTTTCTATGGTATAAAAATTATTGAAAAACAACTATACATAGAACTC TTATATTTTAAACATGAAAAATGTTCGCAATTACCCGAAAATGTTCGCAA TATTTTTTAATTAGTAAGGAATCCTAACCCTAAAACTAAATATTGAAAAA TATCACACCAAAACATCGTAAAATGGCCAGTTTAGCTGACTGAAAAGTAT TTTCTACTCAAATTAAGTGTACACGGAGAAATTCGTTCGACGACGTGGCT CTATGGCGTCCCGACGTCCTACTTCGTAAGGAGTAGGACCCATTCCCCAA TGGGGAGGGCTCATTCATCATCAATCGCAAAAGAATAAGATAATATTACT TGGTTTCTTTGTAAAAGTTACGTCATATATTTCACGACTTCCAAACATAT GATTAATCTAACAAACGCTTACAAACTGTGTAGACCGTCCTTTTAAATAT TCCTTATTCAAGTTTTCATGTCCTAGTCATAAAGTCGATTCTTCGATCTC TGCATGTCTTGATACCGCGCGTTTTATTCTTCTCCTCGCTTTCTCGTGTA GAAAAAAGTAAATTATAACGTCCCATATACCATTCGAAAAGCCAAACATT TGAAAAATGTATATTACCACGCTTTCAAATTTCACGTACAAGTCTATCAC GATGATTATAGAGAGAGGTACCCATGTAAATAAATACGATAACGTAATAT AAATACAGATTTTTAGCGATTTTAGTTTCCGCTGTTTCATATTTTGGCGT TTTCTATTTTGTTGTTGCGACGACCTGTCAACGATTGTTCTCGAGATTTT CCGACATTGTTTTTTCACCGACCGATACAACAGTGCGTTTGAAATGGCAA TGAATATTCCACCGAATAGTGTCGTTGCTGAACCGACTAAGTAAGCTTTA CTGGAGTACAAAAGGGCAATCCAAAAAGATAACAAAACCGTAAATGAGCC GGCCAGAAACAAAAGGGCGTGTTTTTTACCAAGATGTGCGTAGAAAAATG GTTTTCGGATAGCCACAAACCGCTCAATGGAAAGTAAAAGTGTGAACACT ACTTCAGCGCTGCCAATACAATTTCTTGCCATCATAGCTGCATACCTTCC AAAGGACTGCTCCAATNTCAGCGCTGCCAATACAATTTCTTGCCATCATA GCTGCATACCTTCCAAAAGACTGCTCTAACCCGGATAAAATCATTGTAAT GTTCACCAAGTTGGATATCCCACTCAAAATATGTGAAGTGAACAGAATGA ATAACAGAATATTATGAAATGATTCTTTTAGGATTCTTTTGTTCAATAAA GTGTACAAAGCAATTAAATTGACCAAAATTAAAAGGGCTGATTCTGTAAG ATATAGTGCCAGAACGCTCATATGAAGTTTTGAAGACATTTTTTTCAAAT TCCTACCCTCTAGGAAGACAAACTTTTTCTCCGCGATAATTTCATTTTGC GAATGAAAGAAATTGAAATTATGATGTCATTTATATATAACAGAAAAAGA AATCGAAAAACTTCGAATAGAATGGTGTTTTGATTAGATTTACTAATTAT TGTAATGTTTCTTTTTATGAAAATTATTGAAAACAGCAGGACTAGACCCT TTTCAAAAATTATTATAAAGGCTAAACCATCATCGAGACATTTAAAGAAT TTCTATTTATTCTCGCATTTTATTAGTTGATAATTGTCGGGGTTTGGGTA CTAGGTAACAGAAAAACACAAAACCATTCGAAACTTATCTTTTAAGCCAA ATAATGTTTTATTTAGATAGAAACCCCAGTGCAAACTTCTGCAGACAAAG CAAATTTAACAAAGGAATCTTTTTTATTTGTACAAACGTGCTGTATGGGG GGTGAAAATCACTGTTTTATCGTCAGCTCAAATATCAATCGTGTAAAGTA ATGTTTAAAATATCCATGTTCACACAGTAGCTTCAGTTTACTATAATTAT TCCTCCCCCTTTTTTTAGACCTACATCGGAGGTCCTTTAAATTACACTAT GTTCGTCCGTTCGGTCGTTCTTCTGTTACCAGCTTTTCTCGAGATTTGCT CATTAGTTTTTTCTGATCTTTTGCATAGCGATGCAAAATGACAGTACCAA AAGTGACGGAGCTCAATTTTTTGGGCAAATTTGGGCCAAAATACGTTTCA AAATGGGGTTCTTTGGACTTTGCAAAATTGCGTCATTAGTTTTTTTTCTG ATTTTTGGCAGAAAGATAGAGGGCGAGGAAATTTTTTTTATCTGGGGAAA TTCCCTTTCGTCATGCTTAGGGAAATATGCGTATTTCGCAATATCCGTAC GGAAATGCAAACTAAAAAGTCAGACAAAAATACCAAGCTCTGCCAATTTT CTATTTTCTTATTACGTTAGCCTTCAGGTAGGTCCATTCAGCATACGTAT CTTGTTTTCGTTTCAGATACACAGTTGTGATCAACAATGTCCCGCCCATT ACGCTTATTGTCAACAAAGCTACACGTGTCTACCATCTTGGATGTGGTGT GACGGTAACATGAGAGTTGAAACAATCAAAACATTACATCATATGTACGT TAATGAAAAGACGAGCAAAACATTCGAAATTCGTACGTTGAGCCCTAAAG GAGTTGGTCTTATCATTGGTGATGAACAGAACGCTCACATGGGAGATTGG GAATTCACGTCTGATGGGAATTGGTATAAACTTTCCAAAACAGCTGGTCT TTATCAAAATAAAGCAATCAAGATAGATCCTAGCGAAAAATTCCGATACG TACCTATCCCAAACTATAAAGGTTACGGCTTACGCGTGTTGCATTTCTTT GAATCTGATGCATCCATTAGAAATGGAATGACCATTGATATTCCTACCGA TTCAGACAATACCATTGCAATGTTATTAATACATCCTATCCCGATGAAAC CAGATTTGACGGTCCATCAGTATCGTACATATAACGTCAATGAAGATACT TTCCTCAGTAAAGGAGTCCCGATCGCCAGTTTTGTTCATCTGCCTTCCCT TCTGGTCATCCCGGACCCTATCCCGGACAATTATCATCCAATAGTTCATT ATAACGAATTAAAAATGTTTGAAGACTCTCTGAAATTGTTCAAAAACTCT CTGCCTGTTGCACGTGTCAAAACTGATCTTAAACAGGTAGGAACACTGCA TATCAGTTTCCCGACCAAAGACTACAAAGGTGTTTATTTGGTGCCGGCCG ATAATTTCTATATTCCTCTTGATCGTAACGCCAGTCTAGTGTTGGTACCA CATCCTGATTTTTACGGTCAAAAAGACGTCGTGTTGGAGATTTGTTACTG TTTGTCAGGAGATTACACCAATGTACAGAGTGTGAATCTATTGGTCAACG TTCAGCCAATCAATGACGAGCCAGTGGTGACGTCACGATCCATTTATTTA CCAACTCTACCATATCACAATGCAACAGAATCAGATGGCTTCCTTGTTAG TGAACTAGCCTCGAATAACTTGGTATCTGACATTGATAGTGGATCCAACC TAGGTAAACAACCACTTTTTAGATATCCTCAAATACTTGAATTTTTTTTT TAATTTACTTATTTCTATCACGAAACTATAGTCAAACGTTCGAATCTGTA GAGGCGATCATTTACGTAGATTGAACGTTCGCTTGCACAATGGTGGAAAT TACGTAACTTTAATAAAACATGAAAACCCTCTTTTCTTTCTTATTGTCAT CAATTTTAGAATGGAACTAGCCAGTGTTTCTATCATTCTAATATTTTAGA ATTATCGTCCACCTCTAAGCAAAACGCACCGTCGAATATTTTTAGATATC CGATAGTAAAATATCTCTTTTGTAGCAGCGAGCATAAAGAATATAGTTTT TTGATATAATTATTTAAATGTCACATATATAAAAACAGATAAAAAGAAGT TCTTTTTAACAAAAGAGAAAGGAAATTCTCGAACGTTTTGTAGGGAGTTT CTAAACGTCGACCAGAAATGGCGACCACGACCAGCGACCACGACCGGCGA CCAGATAAATTTGGGATATCGAGTTTACCTGGTCTCTCCACCGTCGAGAA CGTCCAAATCGAGTCCTGATGTGGCTTTCAAATGAACCACTGAGAAAGTG GCTAAGAATTACTCTATAGCTAGAGAATACTAAAAGTAACTTTTGACGTT ACCAGTCATTTTCTAGACAAAGTGACACTTTTTGACAAAAATATTGATAG GGTAATTAAGTGTGATGCCTGTAAACTTTATTACACCAAATATTTTAATT GTACCGAATGAGATGCCTTTAGTATGAATAGATAGAAATTGTCAGTAGGA AAAAGTTGTCATTGTCAAAATGACTTATTTTGACAAAATAATGATCTAAT GATCAAATATAAAGCTTCCTAAATAAATTCCAGCACAAATTTTGCCACTA ACCAATTTGATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACGGTGGAGAAAGAGGA AAAACTCGATAACCCAAATTTATCTGGTCGCCGGTCGTGGTCGCTGGTCG TGGTCGCCATTTCTGGTCGATGTTTAGAAACTCCCCGTTTTGTAATTAAA AAGAAAAAAAAATGAAACTGACATCCTTAATAAGATAGTAAAAGGTTCGA AAATGTCATACAAAGAGAGAAAGACTGAATGAAGTAGGGAAAATTAAAAT GCTTTTCCGCTAATTGGTGAACGATAAACCATATATTCAACGTGAAAAAT CGGATATCGAAATTATTCAGTCTCGCTTTAATGATATTCGACTCGTCGAA TATCATCAAGCTCGACTGAATAATTTTCGATATCCGATTTTTTTTGTCGA ATATCTGCTTATTATTATGTTATTCAATAGTTTAACGCTGATTCGGAAGA TTACGAAAATTGACATATTATAATCACAATGCATCTCATTATTAACCTTA AATTGATTCATACTTTTAGGAATAGCCGTTTTTATGATTCCAAAGTCCAC TAAATATGGATGGTGGCAATATTCGAATATCTACAACCAATGGGTGAACA TCACTGTTCAAAACACTGCCGATCCTTTTCACATTAACGACGAACTTCAA GAGCAAGGAGATGAAGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061189TCONS_00061189Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061189-proteinTCONS_00061189-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:719900..729616 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.45 0.36 0.15 0.02 0.29 0.27 0.19 0.13 0 0.13 0.24 0.06 0.07 0.09 0.13 0.16 0.26 0.13 0 0.07 0.27 0.18 0.2 0.16 38.94 26.32 0.03 0 0 0.1