XLOC_038351 (gene) - C. hemisphaerica

Overview
NameXLOC_038351
Unique NameXLOC_038351
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_354:1145118..1154401+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038351 ID=XLOC_038351|Name=XLOC_038351|organism=Clytia hemisphaerica|type=gene|length=9284bp|location=Sequence derived from alignment at scaffold_354:1145118..1154401+ (Clytia hemisphaerica)
TCACCGGGGAGGAAGAAAATGGAAGAAATCGAAAGTATTTTCAGGCAGTC AGGTAAAGAAACTGTGCAGCTGGCATTTCGAAATGCAACAGCTAACAACC ACTAGGATTTAAACTTGAAGAGCGGAAAACATCCGTAAGTATTTAGGGTA AGTGGTAGATATTTCTTTCATTCAAGTAGCTATCAGATTAGATCATAGAA CATAAGAATCACAACACAATTACACTGTAATTTTTGGTCTAATGATATta acatccctcatctaattcagacaccctttttattagctgaaattgataga agggtcaaaattatttttctttgctttgtggtcagagaggaataatcctt tttcaatcagtgattcaaacttTCATAATTGTAATTCCTGTCTCTAagaa agggtgtcggaatttaGACAAGGGCAAAGGGTTGGTATTCATTGTACATT GTATTGATTGAGTGTTTTAAAAGGCACCTACCATTGCAAGGATAGCCCTT TTCAAGGCATTTTATAGCAAAGATGGGTTGTTATGTTTTATTTCACCAAT AATTTTCCctgtTAAAACCTTATAAAATTCCGCTTGCAACTGTACCAAGA AAGTTTAACGCAGAATTCTTTTTTAGGTCAAATTTTATTTCTGCCAGACT ACTAAGGTACCGTAAGTtagtctaatatcgacatccctcgtctaattcca acacccttctttagagacaggaataatatgataGCTTGAATCACTGTcgc acaagtgtttcaaccggtattccaacaaagccatattttggtttgtacag aaatttcgcccgctcaaatcaaaacaacaaaatggtcaatctcactaaag caaaacattgccgccacggcatttccctggataaaaatcctggtcacgtg accatccgtgattttagaccaatgaaaacgcttcatttccctgGATTAAA GTtatgtctacactaacacgcgggaaatagctacaaaaagagagaaaaaa ctgggggtcaaattaaatttttctcccttcttgcggcaaacataaaagac tttaagaggccatttatttaagaaaggggtgttaNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNtgttatatcataaataaattatgt aagtaagtgatattttaagtaacaagttcattaacaattttattttgaag tttgtttttaaaaacaaaacccccgtgctttggcagtgtagttgcagcct atacaagaatagaccttttttcaaagaggacgtcctgttgaataattatg tagtccagccataaaattACTGTATCATNgtaataattatgcatggtttt atcattgtttttctgctggactacataattattcaacagggtggcctctt tgaaaaaaggtctattggaatCTGAAGTCTGactctgaagtcgtaactcc ttgccaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNttggattcatgaaaggttcaaggtttgtttactttttatttcaaat tatttcattgatttattgagctgcaatagctgattgaaaaacgaagattt ttgagttatcagcgtgggcttggccgccattttgtatttcaatttttttt ctccgtactcagcaatttagaggttgttcataatacgcgatttggcttac gcgtaacacttgtggtCGACAGCCCCATAACAGTTGTATATAAGTGTGCA ATAAAGAATgcagaaaattgaaactaggaattttttcaatatttataaat tttatagcaTTATGAGAAGTATAAGAAGAAACATAatccaaaaataaaca tttccttggatttttaaattaaaagaacaacaagaaaatagagTCGATGT TGTAGGAATATTTCGACGATCCTTGTCATCATTTTCAACTACACGACACG ATGAGAAATAATGTGGAGATGTAATCTATGTGGCTCTTACATACAACAGT ATATCAGACAAGAGTTGAGAACCAGATTCTTTATATACATCAATGTTTGA TGTCACAAACCAGTTTCCCTttaaaaggcaaaaaaattaCTCTGAAGTGA TTAAAATGTTACACGTGAgtgtaaaaagtttttctcatttttgtaaaaaa taaatcttgCTAGGCTTGTTATATTTTACCTGAcaaaaaagttctgaatt tAAATTTAACTTCATTATAGAAAAATCATATATGATTAAAAAGGAAATGC TTCCACTAAGATTACTTCTATTGGGATGTTTTTCAATCAAAGTCATGACA GTATCTTTAGATGACGATCCAAGTTTATGGCCAGGACATTTGAAGCCCTT TGGAAGTGAGCAAAAAAGTGCCAATGTTGAAACTATTGATCATTGGCCTT CTCCACAAGGTATAtgctttttgtcatttttagtaTGTTTTGAATACTGT TTTAATAGAGTTaaatcttactatactaaatgagtttatgaaaaatttct gtaACACTTGATTCGAGTATGAAAGAGGGATTTCGTGCAGTTTTAAGACA AAAAATCTTATTGTCTTTCAAAAAGCAGTTGATGATACGTCGTGGTTTta attttatgtttaaaatttcattttcatctatgaTTGAGAGCAAAAATTAG CACTACCTTCCTATAAAACCCCCGTCCAAAAAAGGATTTGACGTTCGAAT CGAAGAAGCCCCTACAGTGGATTTTTAACGAAAATAattctgacgtcaat tattcAAAACACCATGTGACATAAATTTTCGAACTTTAGAAGGCGTGGTA CTTTCTACGAAAAAGTTAGTAAAAATATAGTTTTTAAATTGTCAATAAGG TAAAAAACGGAGGTCTTTTGCGTGAGAAGTGGATATAAGTTGTTGTCCCA TAAGTTCGGATATACCCatgattgttttgaaatcaaagtattTATTGTTT GGTCTTTTAAAGCACGTCATGTCGACCTCAAATTCGTAAATACAGCAACA TTTTCATATCTTTTCCATTCTTATACACTGATATATTGACGCTCAATAAG TTCCCATTTTCGGTTAAATTGAAATCGCTTTCAAACTTCctgaagaaact ctcataattgAAGGTTTATTTTTTACTAAGCTCATATTTATGGTGAAGAT TTCAAGTCACATTCTCTTAATCGCTTTGAAGCATAAAAAGGTATTTACGA GACATCTTTACACTACTCGATATACTCCCGTGGttggtaaaaaaaaacta atttaagTCTTAAAGATTTGATAGATAAAGATAAATTTAGAGAGCATCAA CAGTACCATCTTTCTTATCCTAGGggcttttgatgcgcaagcTAAAGTGg tgtttgcgacgacgggaaccgccTAGTTATAGCTAAATTCAAATGACATC GAAActtatgttttgatttgcagCAAAGCAACTCTTTATTTCACGTAATA AAACATTGTTATCCTTGtaatttatttccttttttgtattttctagaTTT CTTTGAAGATTATAATGACAACAGTCGACCAGTATTATTTAAAGGGCTAG CAAAGAAATCACCAGCATTTACATTATGGGATGATGAATATCTTAAGAAC CATCCTGGAGCAGATAAATCTCTTGTCTTTGttgaaaaacagaagaaaga aAATCGTACACTGGGAGGAACAGAGATTAGTTTGAAGCAGTTTATTGAAA CCTACCAAAAGGAAGAGATTTACATGGTTAATGGCTGTCCTAAAATAATC CGGTAAGCATTTTAATAGATTAATTTTCAAAGTTCTTAACAAAGTTTTTA TATTAAGTTATCATTATCAATGATAAGGATAACTTAAGTATACTTCTATC TGTACTACATTTATCTATTTACACATTAACCCAGATAAAGACTGACAAAC CGTGCAACTTTATAACTTTGAAAATTATTCCCTCTTATTCTTTTCTTCAG AAAAGATGTCTTAATACCACCACCACTTCGATGTGAAGAGACGAGGCGTT ATTTATTAGATGCTGTAAGATTTGGTTTTAGATCTGAATTTGTCATAACG TTGTATTTGAAATGACCTTGCTTTGATTAAAGTCTTTATTAAACTTGTGT TGGATACTGTTTTTGTAAGATAATAATTATACCATTGAAAAATACAAAGT GGATTCAAccttttttggtctttttatattgaatttaaCATACATCCCAA ATTGACCACTACTTATCAGCACAGTAGCGGATTATAACTAGATCTTGAAT GTTAAGGATCTCATTTTAGGTGACATGGTTCAGCTCAGGAGGTACTCAAT CTGTCATTCACCACGACGATCTAGACAACATCAATTGTTTATTTCGTGGT CAAAAGGAACTTGTCTTCGTCAGTTATGACAAATATGGTGATTTTCTACC ATTAGATCAAGGAGGATATTCATCTATTGATGTTGACAAAGTCAATTTTA CTGCTTTTCCACAAGTCAGAAAAGTTCAGGAGTATGTAAGAGCTTCAATG GAAGCTGGTGATTGTCTCTTTATTCCTTATAAATGGTGAGCCATTAATAT TTTCATGTTGAATAAGATGTTATACTTGTTAGGCTGTTCTTGAAAATATG TTAAGGCATATTCACCCGACTAATTCTAGTACCCACGACCGGCCGATCGA AAAGGTCATTGCGATCTTACAAACTAAAGAAAATATCTTAACATACACAA CTTCAAAAAGAAACGTTTTCGCTCTTAATGTAGGGTGAAAACTTTTATAT CGATGAATTTTTAAGTTCTAGAAGTTTGTCTGTGAAATGATTCAAATTCA AGTTATTAAATTCAAATGATTAAAACTATAAATACTCCGTCATTTCATGT CATTTGTGTTCAACATTAATCTTTCATCAGGATTCACCAAGTTAATTCAA TTGCTAACGAGAAGAAACAGAACGTAGCTGTCAACATTTGGTTTAAACAC ACAAGAGGGCATAAACCAAAAACTTGCAAACTATCTCCAGAAGATGCTAC TATTGATAAATATTATTTCTCAGAATTGGAAAAAACCCAAGCTAGTATTG ATGGCCGTGAACCACCTAAAGAAACTCCGATGTAGGTTTTGAAAACTTCA GTTTCatttctttaaatattttcttttgtgaGGGAATTTTGTATAGGTGC AAGAGATATCCAGTGAAGGATATAGAAGGATTTACTTCAATTTAAGTAAT ATTAACATAAGGCTTCACTTTGTCTTGCCTTGAAAGGTTGGAGATTCTCT TCCAACTTTCGTTTCAAAACTCAATGAGTATGAAATTAACAACCTTCTCT CTAAAAAGACTCATTTATTTATTtccatctttttatttttttagtgaaaa atatgAAGCTTTTTTGGACGAAACAAAGAAATTGCGAATGAAATTCAGCA CTTTTGTCAAGTTATATTACATGGTAAGTTTCATAAATAAATCTGTCTTG AAATGTTATAGATCACTTTTGGGGATAAAATTTggactaaattttatgaa gaatatTTGTTTATGGCCTATTTTGAAAGCGTTGTGGTATGCTGCACCAC TACTATCAAGTACTATATGTGTCAGGCTGTTGAAAAGGAGTTTTGACATT GCGTATTCTCCATTCTAGCATCTGTTGATAACTTTGGCATTTTAAAATAT AAGGAATACGGATTTTTGTTTGAAAGCTAAGGAAAAGGAAACTGTAATGT ACTACGTGTTACCATTACATGCAGAATTTCCTTATCAGGACTGAATGGTA GAAAATATTGAACGCGGATATTGCTTTTATGATAAAGGAAACTGTTGATG TTTACGACAAGGAAGTAAAACCTGTCTTTGCTTTTGCGAAATTGGAATGA GAAAtgggaaatttttaaattaacaTGAACTTCCGCGTTCATGTCACTGA CCTCTCACTACTTGTGATGTCTGTGATTCCTGTCTTTTCAATATACAAAA TACTGCAATGtaactttgaatattttctaTATAATACGTGCATATCCCGC AAATTATATTTTGAAACTCTCGAGTGTTTGTCCCAGTATTTCTTTGGGCT CATTACAGTTTCTTTTTTATACAGAGTGAAATCTTGGATGACGAAGTGAG AGAATTTGCAGAAGAAAATTCAGAAGAACTGAACAAGGTACTTAAAAAGG TAAAATACTCAATTTGTTCTTTGAATCCTTACAATATCTCCCCTTAACAC TAGCATTTGAAAGTCCTTAAATGATTTCTTTCCTCTTTTGGAGGACACTA TGTAATTTTTGTTACACTTATTTCTCCTGGGAAATTAGGATTTTGtccta tgtttttgtttttcggGGTGAGTTAAGGCCTTTCCCAACAGTGGTTATCT TGAGTGAAGAAGCTTTCGTGAATGAACTAAATATTGTTTGTATCAAATGT TCTATCCTAGCCAAAAGGTACAGCCCTTTCTTAATAACCTTTTAAggttt tttgaggaaatttcaatAACTTAGAGtgcatttctttttttcttgagaGA ATCTTTAGCGCGATTAACTTCCACGAATTTGCCTAAAATTCAAAGccatc gcgaaagtttcttcccttAAATTATTTCTATCAATAGATTAGTGACTCGT TTGACCCTTATGGAATATATTCTGTAGTAtggcgagactaattttagcgt tttagcgagttttccctattttcgctaaaataaataaaataaaacacgcC GATTCGACCGAtagctaaaatttatccgcgcgaaatttttcgaaaagctg atttgctaaaataaatccagtatgtttttctttcattttttatcattttc atatttttttcaaaaactagtaACCGGGGATGGGGGCCAGACCACCTTGA ACAAGTGGAGACCTACGGTAGTTTACCGAAGTTAAAATTGCCATCATTCT TGCACCTCTTTCTAACAAGAATTTTTTCGATATTTCACGAGGTAGATGCC CTCTAATAACGCCATCTTTGTAGGTTGTTTTAGTGGCAAAAACATCGAAT GGATGAAACTTTCTTCAGGGAAACATTTCgtgcattaattttttcttcaa aatcattaccctcgctaaaattaatccacgcgaaattttttgaaatcgtg attcgctaaaataaatccaaaaaaatcaagattttcctgacccgctaata tacgctaaaattattctcgccaaaattaaagtATTCTATAAGTGTTATAT ACAAGTGTGGCGGAAATATTGGCGTGACGCGTAGAGGAACTTAGTGCATG GCGTAGTATACCCTTAATTTAGAGGGCATATACCAGAGGCGGCAAGGAGT ATACTAGAGGCTCTGTACAAAAGGCACGACAGGCGGTGTGAACATCAGAG GCCCTAAGAGAATCTAGACGTCACAATCAAGTGACCAACCGCGACAGTGA GAGGAGAGACCCAGTTTTCAACTATCAAATTTATCTTTATTTGATCTTTA TATATTCCATATTCCAGATCTTCGATGCATTAGATTACACAGACAATGGT TCAGTCAATCATGCTGATTTCGAACAAGCTATCGTAGATGGGAAAGAAAA GGTAACTACTAATCCCTTAATCTTTCAATCGCCAAATCTATAAACAATTC TTGTTAAGTGTTACGTAAAGAATATAATGAATattaatttcaaagtttta attGACCTAAACCTTTCTTGACGGGTTCAAAAGGCTGAAAGCTGAATTAC AATCTTTTCGCTAAAGCAAGCTGATTGATTATCAACACGcattttcctta aaattttccattttagaTGCCCGAGCACAGTCTTTTCTCATACTTATTGA TACTTTTATCAAcataaaaatcatgaatttatCTGTAAAATAAAAAGGTT AGATGTCGTTTTCTCACTACTCATGTTtgtttgtttcaaacttttaggaa caacaccaaaagattttagAAGCGGAAACCCTTGTGGAAGACTTTTTTAA GAACTCTGGTATAATACCtttatttccattttttgacATCCTTCTCTCTT TTCTAATGGATGGATGGTTTCTTTTGCTGAAAACTTTGTGTTCTTTCTTT AATTCAGTGCATCGAAATCGGCTGCAAGCTGTAGAATGTTGTACACTTAG TGGGAAAGACTAAGGGCCGGACAGCATTTGCAACGAAACTTGGAATATAG AAATTGACCTAAAAAGTCAAACTTAACGTTGTTAATGATAAAGGACGTTA ATTGCACTAAGACTATGTCAACCTTTTTCAGTCTTAAATTTCAAAGTACA AACTGTCAGTCAATCTTTTGCCTTCCTATATCGaacaaaaataaggtaaa atcaGCCGACATTAGAATTAGgtttaacatttttttgctccTTGCATTTG CAGTTAAAGATCAAACCAATAGAGTAACCAGAGATGCTGAAGATGAATCT GATGGAGAAGAAGTGAATAAACGACCAACCGATGAATTATAGGTTCTAGA TATTTAATTAACATAATGTTTGTATATAGATTAATTAACAAGTCTCAATG TTTATGAAAAGGGCATACGAAGCTCGCTCCAGTTTAGACGGTCAACTTAG CTTCCctcatttttgatgaaaatcggCTAGTTTGATTATACATAATTTTG TTCTAAGTTCTAGAAATCTAATGGGTCATACAAAAGAGAGCGTTCAAAGT TTCATTTCATGACGAAAGTCATAGAAAAATATAGAATACAAAACGCCATA TTAATTCTTAAAATTCGAATATATTCCCATTAGTATATTGCCTTATTTTT AACGTTCTATATAGAAACACACCACTTGTATTTGCAcgaattttatttga attttcctGGATGTTTagtttttaataatatttttgtatatatttttacg TACATTTTCCCTAGACTTTTCTATGTATAATCtgataattttttgataaa ttagtTATTCGATACATTAATGATattattgataaaatattttttgataa ggTTTGATTTTTAATGGGGAAAATATAACATACAATTAATCAACTATACC TAAAATATCCTGTATTTAGTTGTACTGAACGAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00061125TCONS_00061125Clytia hemisphaericatranscript
TCONS_00061126TCONS_00061126Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00061125-proteinTCONS_00061125-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_354supercontigscaffold_354:1145118..1154401 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
42.19 39.39 13.35 10.94 94.34 75.35 62.87 63.06 89.1 75.31 42.26 48.66 24.4 22.73 27.64 27.91 22.78 24.29 21.89 34.68 18.49 19.32 45.73 42.97 17.78 23.29 32.38 23.35 68.15 62.5