XLOC_038265 (gene) - C. hemisphaerica

Overview
NameXLOC_038265
Unique NameXLOC_038265
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_350:207488..214708+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_038265 ID=XLOC_038265|Name=XLOC_038265|organism=Clytia hemisphaerica|type=gene|length=7221bp|location=Sequence derived from alignment at scaffold_350:207488..214708+ (Clytia hemisphaerica)
CACCATTTGCATATAACCAAAATTCTACGTATAACGAATAGGATAATGGG TTCACGTCTTTATCAATACGTTTTAACTCTTTCTTGTTTAAAGCTTGTCA CAAGATAAAATTTCATCGGGTGGAAGCACATCATCATCAAACTTCACAAT ATAACTTATACCAACTTATAATATCAACCATGTCGAATGAAGTAAGTAAT TTTAACTTTTAGAGGTTAGACTGTAAATCATAAGCTTCACATTTCCTGTT TATACGTTtaatgattttcattttcattcagttCTTTTCTTCTTGCAAAG CTAAAGTTTCACTATCAAAAAGTGCAGTTTGGCTTTAAAAACCTTCatac aaaatataaagaaaatgtaTTAAACTCTGTACATATGCTTGATTTCATGT AATGCTAGACAAATAACGTGCAACAGCAGGTGAAAATGAAGGCATGCctg tcaaatttttgcaaaagaaaacttcaattAGTTCAGTCCGAAATATATTG GccattttgggtattttaacatttttcagaatttaaagctcaGGCGGAGA TTgcaatttcagtacttccactttgtttcaatggattttattttattttg ggaggggttaagttGCTTCCAGACTGTATTGTATTCTCAGTCATATTTGG AACATTTTTTAGCTTcaagatcctgagatcctaactACTAAggggtcttc gacaaaaaactttcgaattttttatcggcataagcttcagaccccctccc ccccttgctcttatcgaccaaaatttttcaaatccaacTTTTACATCTTC GAAAACACAATTTCCTCCAATCTTGTCCGCCATCGCCTTCCNTTCCCACC CGTCATCgttgaatttttgtctatttgtgcaccaacattgagtttgttca tacccgcattgatattgttaatcaaaacgaaagttaaaatgaCAGGATAT TTCGAAGGAAAAGGCAGCGcgctggccaatgaaaaaagggttttttatca aagctagTTCAAAActgtacttttaaagcTGCGAATTTGCGCTAaaaggt gaaagcaagtgaaatcatatgctttcagtggagtttgtggacgaaatcag aaagaaattggctgaaaggattttcgtctcaatacttgtttttttatcgg tatgtagTTGCACCCccaaattcgaaagttttttgtcgaagatcCCTAAG GTCTTAATTTTAATgataaaactcagagttaaaactctacttttccagca cttaaaaatcacttgtagttttaaagttttgagggaaatTCTCTTTCGTG CCAAATATTCACTtccgtttggtttgggaacacAAACTACTAATGTCTAG ATTTTTCAATacatctccagaactaacaggttttttgaaattctttaaaa aagtccAAGCTCCTAAATAGTTTAACTATGTTTAACTACCATCAGTagaa tactcgttcatctattcaagtttgaagacaaaaatttgcgaagaaaagaa accttgagcacaaaaaatgctttttttaaaacactttttccaccgaaaaa caaaaaacttttatagACTAAcgttccccaaacattgaagaagcttCTAC tgattaaagtaaatgagataagataaaaccttgtaatcaaccagaattta caaccttttgtTCAAAGCAAAAAGGCGTGCTTTTCTCGCCACCATCttgt tttaaagaattattttttgtgcCAGTTCACATGgaatttttttcatccaa tcagatcgcgcaaTTTCACTTAcatataataaataaattcctgtaactca atgaaaattggaaaaagctggtttttgactgtttcttatcctaaagtgct attttttgataaaagctatgcaattatGTTTgaatttctagaaagcttac ccactCATTGtcagtcaatatattttttatttgaaagtaattgcttcatg gaataaaaagatatatcaaatcaaagtcaaatcttgtagggtcatagGGT CACTCACCTTGTAAAGTTTAGCATTTCTTGAGATATATCCAATTTAAGTG CTTTTGGTAGCTCTAATTCTAAAACAACTTCCCACGGTATGCACTGGCAG CACAAACTTAATTTCTTGCaacagcaaaaattaaaaacagcaatATAAGG GTCTACCTTACCTGGCTTTAAAAACTTGTCACAACATTCTGAGCttagaa ttctaaaaattgGCTGTTTTCTATATGCTACGATCTTAAAAGTAGATTTA CGTTGCCCTCTAAACTTTCAGTGTGaagtaacaaattttacaccaTTTTG TTGCTTGAAAAATTCTCATCATGATGATGATAGGAAATTTTGAGTAAGAA AATATTATAAGTGGGCTAATTATGGGCTGTTCCCAAAACCCCTAAAGTTT ACCCACAATTagactccaaacaaaagaatttcgtcaCATAACACAATTAC TCTTCATAATTGTGTTATGTGactaaattcttttgtttggatTCTAATTG TGGGTAAACTTTAGGGGTTTTGTTATTAAAAATATCCATTAACCGAAACA ACCCTTAAGGGCAAAGGGCCTGGTACACGACAAgcctaattttcaatttt tcaagaagctgtttttctcGTTACACACCTCTCTTAAAATCAAACATTac caaaattttccattttgaaaaGGGTTCTTTAAAGATTATTGTGTTCAAAC TGTACACATGGGATTTATTGACTCAAAGAATGGTGTCCTATTAAAAAGCA GTACTTCAAAAATAAACTTTGGGTTTcccaaatttcaaagtttggtgtta ttgttaaaaattttagacCCTGTGAGGGTTATGATAACAGACGTCACTAG AATCCcttaattaattttcttttatcaatcatattGATATgatttttatt aatcttttctcGTTTATgttaatattttagccatcaGATGTCCCAGACCC AGCTGCAACAGTACTGTAAGTGTTTAGATGGAATTTATTTGTCgattttt catctaaaatttgTTAAACCTGCATTTCATCACATTAAAATGTTGTTagt atattattttataaacAACCTTCCTTGCAACTCTTAGAGCAAAAGTTAAT TTAAAAGTAAATGAGTTTTAATAGAAGCCTTACTGTTTTCAAAGCTCGTT GATTATAGCTACTCAAATTGATATTTAAAttggtatttttgtttatttga taaaaagaaTCCTTTATACTTCCTTTATTTATTTCAGATATGTTGGAAAC CTTGATAGAAGGGTCACAGATGTCATGATGATAAACATCTTGAAATCAGG ATTACAACAAGGCGAAGAGAAAGTCTTGTCAGCTAAAATGTTTGCCCCAA ACGACCCTGTAAGTTTCATCTTCACTTCACTTCACATTCTGCCATGCTTT GTTATCTTAAATCCTTCCCAAGAGATGAGTTCAATTGGCTTTCTGTTTAA AATTAGGTTATGTAATAACTAACTGCAATATCATGCAATTCTGGATATTG AAACCAAACTTACTTTCATACTTTCAGTCACAAGGACCAGAAGGTTATTG TTTCGTTCAATTTGCCGACAATATTTCAGCATGCCAAGGAATGACCTTTC TCAATGGGCGTGATTTTTGTGGAAAGGTTTGTGTCTATTTTTTTTCTGTA CaacaagttttgattttttttaatgaagttTGTAAATATCAATAAAAATT CTGGAAAGGCTCCTGGTCTTGAAAAATGCTACTAAAATGATAAAGTAGCT ACTTTTCTTATTATCATCTTATTGATTTATCTATTTTAGAAAGTGAAAGT CAACTGGGCAACCAACTCGAACAGTGGTGGGCCAGGAAATTATAAGATTA TAGGAAGTAAGTTTTTTGATTAACTTCTTGACTCCTCCGTGAATGAAATA ATTTAGGTAAGATGGTTTTTGTTTCTAGTTCAGATATCAGGCCATATTTC AGGGCAGGGCAGGGTCCGTTGGTGGTCAAAAAGGACACTTTTTCTagtgt ttttccactaaaaggctgtttttaccaaaattcaattgatttaaAGAGGA GCAGCAAAGGCCATGAAAAGTGGCCTGGATATTGTTCAGAGAGTGATCTG AATCCCCCCCATTCATGATGCACCTATCTTCGTCAtatttgaaaagttct tgaaaaggAGATCCCCTTCAAAGAAGGAGGGGTTTGGGGCTCGCACCATG TTTTGCCAACAGTTATCCTGTATTGTAACAACTTATAAAATTTTGTTCCT TCTTAGGCAGTGTGACCATCTTTGTTGGTGATTTAGATGATGAAATAACT GATACAGAATTGAAACAAGCTTTTGATCCCTTTGGTGAAATATTGTAAGT TCGTATCATATCTTTAGCACTTTTTAGACATTTTGATGAATGCTCTTTAA TTCATGTCCCACCTTGTTGgggtttgtatttttttatcaatgcttGTTGA TTTAGAATGATCAGTCAGTTTTATTCTAATACCAAGATTCTCTACACTCG ACCCTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNtatgttttattatatacctagaggcaaaaataaaacattaattATGTC AATAGCTAAACGTTTCacttaaaacactcccataatcgaacgttcgaatg tttttatttcttaatgattttcttaattactttaagtcataaaatttgtt tatgaaattgacaatagatttattttaatgaatttctttgataacaacaa gagcaataaaaaaactcaaactttaaagcaaaatttgaaaaaaaaattat accgtggtataatagccatggtatatcaggaattattcaatggctatttt tgcctacaggtatataataacaGGCCATATTTCAGGGCAGGGCAGGATCT GTTGGtgaggctgtttttaccaaaattcacagggggggtccatgtacaaa acagCGTNTTATCAATCATATTGATATGgtttttattaatcttttctcGT TTATgttaatattttagccatcaGATGTCCCAGACCCAGCTGCAACAGTA CTGTAAGTGTTTAGATGGAATTTATTTGTCgatttttcatctaaaatttg TTAAACCTGCATTTCATCACATTAAAATTTTGTTagtatattattttata aacAACCTTCCTTGCAACTCTTAGAGCAAAAGTTAATTTAAAAGTAAATG AGTTTTAATGGAAGCCTTACTGTTTTCAAAGCTCGTTGATTATAGCTACT CAAATTGATATTTAAAttggtatttttgtttatttgataaaaagaaTCCT TTATACATCNTCCCAAAAACACCCCAACACCCcctatattttacaatata ctatccagtactatccagcaaactcccaaatacaccctgacaccccctgt atgatacaatatactatcaagcaaactgccaaatataccccaactccccc cttacatagtacaatatactatccagaaaACTACCAAATATATCCCTACA Ccccttcataaaataaaaattttatgccaaaaaacttgaaactttggggc aagttttttattcttcccataaaaaaactttcaaaaaattttctcaaaaa ttcNAAGGCGAAGAGAAAGTCTTGTCAGCTAAAATGTTTGCCCCAAACGA CCCTGTAAGTTTCATCTTCACTTCACTTCACATTCTGCCATGCTTTATTA TCTTAAATCCTTCCCAAGAGATGAGTTCAATTGGCTTTCTGTTTAAAATT AGGTTATGTAATAACTAACTGCAATATCATGCAATTCTGGATATTGAAAT CAaacttactttcaaactttcagtCACAAGGACCAGAAGGTTATTGTTTC GTTCAATTTGCTGACAATATTTCAGCATGCCAAGGAATGACCTTTCTCAA TGGGCGTGATTTTTGTGGAAAGGTTTGTGTCTATTTTTTTCTGTACaaca agttttgattttttttaaatcaagtttgtaAATATCAATAAAAATTCTGG AAAGGCTCCTGGTCTTGAAANTTTTTTTTAATGAAGTTTGTAAATATCAA TAAAAATTCTGGAAAGGCTCCTGGTCTTGAAAAATGCTACTAAAATGATA AAGTAGCTACTTTTCTTATTATCATCTTATTGATTTATCTATTTTAGAAA GTGAAAGTCAACTGGGCAACCAACTCGAACAGTGGTGGGCCAggaaatta taaaattatagGAAGTAAGATTTTTTTGATTAACTTCTTGACTCCTTCGT gaatgaaataatttttaaaacctaAGAAATTGTCAAGGGTAAGATGATGT TTTTTTCTAGTTCagatattaagcagatattcaatgggtaaaagttggtt attgagatttattaacccgag
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060956TCONS_00060956Clytia hemisphaericatranscript
TCONS_00060957TCONS_00060957Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060956-proteinTCONS_00060956-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_350supercontigscaffold_350:207488..214708 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
56.2 54.67 43.72 46.17 76.3 58.78 77.14 80.33 84.02 72.57 104.24 61.12 74.63 87.23 100.68 83.92 94.02 90.94 117.95 127.09 80.16 74.46 55.14 75.19 71.08 64.33 81.06 83.41 61.3 55.6