XLOC_037905 (gene) - C. hemisphaerica

Overview
NameXLOC_037905
Unique NameXLOC_037905
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_339:111208..117314-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037905 ID=XLOC_037905|Name=XLOC_037905|organism=Clytia hemisphaerica|type=gene|length=6107bp|location=Sequence derived from alignment at scaffold_339:111208..117314- (Clytia hemisphaerica)
AGATGATTAGTCTCTCTCTGGATGGTGAAGAGTATCCTGCTTTTCATCAA GGGGTCTGGGCAGGAATTTGGTGGGCCTTTGTTTCCATGACTACAGTTGG GTGAGTTAATTAAGTTACATTCTTGAGTTATAGTTTTTTAGTAGAAGTGT GGAGTCTTTTCACCTTTTCACCACAAGATAATTTCTGACTTATACTTTTG TTTTTACAAAAGTAAATATTCCACAGATTGAACTTTAACTTAAAACATAT TTTCTAGTTCTTGTAATCAATAATTTAGTTGAAATTGGCGTTGGAGTTGG TTCTGGCGGAACCAGCACTTTAAAATAGCAATCAAATAAAGCTTCCATAT TTTCGGAAAAAAGTAGGGGGAGGGGTATTTAATCGAATTTGAAAATCCAA AATGCATTTTGAGACTAAAACCCACATCAAAGAATGAAAGNTTCTATATA TGCTCTAATTGTAGGTAGCTTTTTCACCCTCGATTAAAATCACAACTTTG ACCTGTTGTCGAGTGTGACGATAGTGTATATTGCCAAGTTAAATTATATT CCTGTATCATAATAAGCTCTTTAATCAAAGAGGTCTCATTTTTTTAGTAA CTTCTTTTCAATATAGTCATACTCCATTCGATGATAACAATCACTTTATG TTGAATTTAACTTTGAAAAATTGTCAATTTTTCCCTTATTTGGGGGTTAC GAGTTTTGCGAATAACGTCATAGTTTCTGGCCGCAAAAACTTTTGCCAGG CCTAATTCGCGGGTCCCTTACCTCTCAAAAAAGTCTCAATATCCTTTCGA ACCAATCACATGAGATTGCGTCCTAAGAAAGACGCTAGCATCCTAAAGGT TGGCCACCTACCAATACAAAACTTTTTAGAGATTTTTCCCCATTCTTCCA TATAGAACTCGTAGACTGGCCTTAGTAAAGCACAGCAATCTGATGTCTTG TTAGCTTTGGTCTGAATCTCTCTTTGTTTGACTTGATCATTTGACTTGCT TTCAGGAGATGATTAGTCTCTCTCTGGATGGTGAAGAGTATCCTGCTTTT CATCAAGGGGTCTGGGCAGGAATTTGGTGGGCCTTTGTTTCCATGACTAC AGTTGGGTGAGTTAATTAAGTTACATTCTTGAGTTATAGTTTTTTAGTAG AAGTGTGGAGTCTTTTCACCTTTTCACCACAAGATAATTTCTGACTTATA CTTTTGTTTTTACAAAAGTAAATATTCCACAGATTGAACTTTAACTTAAA ACATATTTTCTAGTTCTTGTAATCAATAATTTAGTTGAAATTGGCGTTGG AGTTGGTTCTGGCGGAACCAGCACTTTAAAATAGCAATCAAATAAAGCTT CCATATTTTCGGAAAAAAGTAGGGGGAGGGGTATTTAATCGAATTTGAAA ATCCAAAATGCATTTTGAGACTAAAACCCACATCAAAGAATGAAAGACTT GAGACCTGAAACTTTCATTTCTAGATACGGCGATATATGTCCAAAGACGA AACCTGGTCGTATATTCAGCATTGTATGGGTGATCACAGGAGTTGCAAGC TGTGCATTATTCACGTCCTACATGACGACGGTTTTGACGTCCATTTGTAT GACGGAAGACGTGTCTCTGACGGCAACCAAGGTAAAAACAACAAATAACA CTCCATTCACACACTAAAAATTTGTTTTTATTCGAACTCTTGAGCATTGA TTTCCTTTGAGCTGTTTGGTCAACCTTTTTGTAAAAAAGTTTCTTTATAA TTGTTGAATGATGGCCGATTGGTTTGAAGTGCCGACTGTTCCTTTCAGTC TAAGGAAAGCACAAAAGATTCACAAAGGATATTGGGAAAACAACCAAAAG TCGGCGAGTCCAAGAATACTGCACTATTCACGGCAAAATATCGATTGCAT CAGACAGCTTTAGAGAGTAAATAGAAAAAAGTGGTTATATAAGGTTCAGA AAGAGGTGTCTGTTATGAAGGAACGCCCTCTTTAAACCTTTTGAATCTCC TTTCCCAATTTCTTTTAGGTTGGCGTCCTAACTGAAAGCGAAGAACATCG GTTTGCCATGAAACGAAATTCAATGCCTCAAGGTAAATCCTTCCTTATTT CCTGAAAGAGCCAAAGGCGTTCAAAAGAGTTCAATGATAGTAACAATATA TAGGTCATTTAAAGATTTTGAGAGTTTTAAAAGGATTTCTGAGTTTTCTA AACCAAGCTACAATGGTGGAACAAAGGTTTGTAAAACTTTTAAAAAAATC CCTAAAAGTGTCAATCTTTTTCACACTTGGGGAAATTCATTGGCAGAAAA TATCAATATGCTTGCCAGGAGTCCTTATGACTTCAGTCCGTATGATTTTT GGACTTCCAAGACTTCCAAGGACTGAAAATGGGTGAACCTCGGCCACACA GATTGTAGGTGCACCAGAGAGCTCTGAAAAGTTGTTTTTCATGAAGGAAC CTCCTCAAATATGGTCTAGTTAGTTGTTTTCTCGAAGGAGATGAAGAGGA AAACTCGTCGAGTCTTCAATCTCAGACCAAAAAAGGCCTGAAGGTGACGA CATTCATTTCCTTCAATATTGTGTGGATCAAAAAAACATCATTGGCTTTA TTTCATGGATTTTTGAAAAGTCTACAATCTTTTGCCCATGGTTGTAGCTA TGAAAGTTGCACCGTCTTTTAACCTCTGTTGGGCAAATCAATATATTTGT AGCATTTCCAACGATAAATGAAGTCATAGATGCTTTAAAACGCCGTGAAG TTCGTGGTATCTTAATCGATAGTTACATAGCAGCCGAATATGAAGAACAA CTGAAATCGTTCAAGAGACAAATGGTCATTGAATATATCACAAGTTATGG TGTGGTGTTTTTAAACGAAGGTGTTCGCTTCTCAGATTGTGTGCGAGATT ATGTGTTTTCAAGACAGAATGAAATATCAGAGATTATACGACAGAACGTA CAATTATTAGAGGTATGTAGGTTCTCTTCCTTCCATGGGTTATTGCGATA AAAGTACTAATCTTGCCACAGATACATGACTTGTGGCTCAACTTTCAGGA GGCAAAAAGATTAGAACAGGGTCAGAGGCGTCTAATGTTCACAAAGTTCA TAGTTACTGTGCTGGTATAATATCAGGGTTGGTCAAAGCAAAATTTTTAG AAAATGAGCTAGAATGTTAAGCAACCTCAGGTCTGACCCGAAAACTCTTC GAGCATCTTCCTATTTTTTACTAGGGGAAGCATCTTGGGGGTCAAAGAAT ATGGCTTAATTGTTTTATTCTTGGATAATGATAATGATTCATTGGGATCA CGTCGAAATTTCACCGAAGAAAAATGTTGTGCTATAATTCTTTTATTAGG TTTCCACGACGAGTGCTGCAGCAGAGAAATCGAACAATTTGATTGATGTT AAGAGTCCTTCATTTTTCTATATCGTAACTGGTGTGATTGGAATATTAGT GGTGGCAGCTTTCTTTGGCACGATATGGGATATTAGAAAAAGACAAATGG AAAAACGTGAGTATTGTACAAATGAAGTAAAAGCCCGAATGGTTAGAAGC GAATCTTTAACCTTTCTTAGCCAAGCAAAAGCGAAGCCTTAGAATATACG CCGTATTTTTGACTATGGATTAAATTTAGCGGTTTCTTTGTTTTCGAGTG GTATATTTTTTGAAATCTGGCGAAAAAGTTTACTTTCAATCTGAAATTTG TACAAAAACCACGCGGGCCGCTCAAGGATTTGGGGATTTAGCGGCTTCAA ATCCTACGTAGGAGGGATTTATGCAATGAATACAGATAAAAGTTATCAAA GAGCTAAAAAAAAACATACGTCAAAGAACTTCGGGGTATAATTTTTTCTC TGTAACAGTGCGATCAACGGAATCAATCCGGTACAGCTATTAGGGTGTTT GGAACTGTTTTAAGATTAGTTGTTGCAAGTAGAAATGAATGAAATGTAAT TAAGAAGAGAAAATTACATTAATTGGTTGTGGACAATTAACCAGTTAATA TCTAAGAATATCTATGAAAATTATCCCATTCTCACATAACCTTCGATAGC TCAGTTGGTAGAGCGGAGGACTGTAGATGTGAATGAGCAGATATCCTTAG GTCGCTGGTTCAAATCCGGCTCGAAGGACTAATTTTCTATGATTTTTTTT TCTAACGAGATTTCTTTTTCACTTGGTGTATATCAGATTCTTTCATATTG GAAGTTTATCGTGGCTTGGATCACGAGATTTACGTTTGGCTACGTTTCGA GAGATTCTTCTCCCATCATCGGATCCTTTCATCTTTTTAATAAAGAGTCA AATACAGAATTTAAGAACCTTTTATGATGGTAATACAGCAGCAAATTTTC TTAAACCTAACTAAAAAGAAATACAAAAAGGCCACTCACAACATCTTTTG ACTCTCCGTTCGAATCTGGTGGTACGTTTTTAGATAGAAAGCATTGATAT TTAACGTGGAACAATGAGAACTGGTGACTGCTATTTTCAGCAATCTTTAG CTGTAGCTATTTTTGATTTGTCAAAAACAGTTCCAATGACAACACGAGTG ATCTATCCCACTTTTCCGGCCTAACCAACCTGGTCGACTCTAAGTGACGA CACCACATCGATTGCTTCAATTGATCTTTAAAGATGACATCGTGGAGATC GAATTAAGCTTGACAAACAATTCAGATTACAGGAAGCTTGGCCGAGCAAA TAGAAATATTGATAACGGCTCTCGACTTCGAAAATACAAAAAACAACAGA AATTTGAACACTGAGTTTCTGCTGGTTTTAATACACGTTTTTTTTATAAG AACAAACTATATAAGAACATAAGGCTTCGCTGGCCAAAATGTTAAGAACA AGTTAAGAAGATTTAAGACTTTGTGGACTGAAAAACACCCTATTTCTTAG GAAAATGGTCAAAAATATTCAAAAAAATGGTCAAAGTAAGAACATGTTAA GAACATTATTAGGCTTAAAACTCAAAAAGTTATTGAGAACATCCAAAGGC TTCAAAAATTTTGGATGCTCTTATAAAAAAATGTGTACTGGCTTTGATAA TTGGTATTCTCCTTTTTTTCATTTTCAGTGAAGAAGTACAACCCCCACGA AGATATTTCTCTGTCCGAATGGCGTGCACGTTATAAATGTGACTTTCAAC AGGTGTTGGAAGACATGCAAGGGGAATGTACAAGCATAAGTGATAAATGT ACTTCTATACTTAAACAACTTCAAAGTAGTAATGGGATTGTATGTTTACG GAAAAAACGTTCGGATGATATGAGGATTGAGTATGACTACTAGTCCAAAC ACAACGTTGTGCCTAGCGCCCAGTGACGTCGAATCGACAGTTAGGAGACG GTAGAATGTCTGTAAGGAATGAAACCACGTTCACACGCTACGGTTCCGTT TCATTTCGAAACAAAATGAAGCCATTCTATTGGTGAATTCAAGTTTTACG TCATTTCTAACCAATAGAATGGCTTCACTTCGTTTCGGAGCGAAACGGGA CCGTTACCTGCGAACATGGTCTGAGTTTGCGTATCATTCCTTGAGAAATC AATTCATGGTATTCATTTCGTAATGATTTCTATGGAAACAACCGGTTTTT GCCAGTAATGGCAAACTTTTAACAACTTTTCTCGAAGAAGTGAAGACGTC AACGATATTGTACCTCTCGGATACAACCGTCAGCTATTGATTTTTACAAT AGAGAAATACCGATGTTGGTTTATTCTCGATTAACCATCAACCACGTTCC TTGAGGTGGAAATTTGGTCAGCATTTTAAGCAAGAAATTTTATGGAGAAT CGACCATAAAAATGTTTTTCTAAAATATGTGTTAGTATACCAATGTAAGT TTTTTAAGAATTGTATTAAATAGCTCGGACATCCTTTTGGATTTGTCCAT TAAACAATTACATGCGAAATGGGAGGTTTTAAGATAGCATATAAATAATA TTAATCTGCTGGCTCATAGCCCAAAACTACATGAATGGATCAGGCTCTCC ATAAAAATGGTACCGTGTCCAGTTTTAGAGCTGATTAGTCCGCCTTCTTG TTTCAATTCTGGTCGCACACAGCCCGATTTAAATGTTTAGAAATTCGAGC GTTCGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060262TCONS_00060262Clytia hemisphaericatranscript
TCONS_00060261TCONS_00060261Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060262-proteinTCONS_00060262-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_339supercontigscaffold_339:111208..117314 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.16 0.09 0.55 0.78 0.03 0.05 2.31 2.83 1.84 1.73 1.51 1.57 0.58 0.43 0.33 0.41 0.63 1.03 1.28 2.56 2.44 2.22 1.11 1.28 1.15 0.75 0.28 0.35 0.03 0.03