XLOC_037849 (gene) - C. hemisphaerica

Overview
NameXLOC_037849
Unique NameXLOC_037849
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_336:19315..22743+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037849 ID=XLOC_037849|Name=XLOC_037849|organism=Clytia hemisphaerica|type=gene|length=3429bp|location=Sequence derived from alignment at scaffold_336:19315..22743+ (Clytia hemisphaerica)
AAAAAAGTCGGGTTCTGGGTCTATATGTTTTTTTGGAGAGACGGCACCTT
AAAGATCAGTATtccccagtctttttttctatttttctttccttaTCCAT
GTGGCCTTAGTTTATGTCACATTTCAGAACTTTCTGTTAATTTTACAAGC
TTGGTGATTTGAAAACTTTACATCTGATAGAAGAAAACTCTACAAACTTT
AGCTGATAGAAGAAAATTCTGTGGAAGTTGCTGTCTACAACTTTCTGTTA
ATTTTACAAGCTTGGTGTGATTTGAAAACTTTACATCTGATAGAAGAAAA
CTCTACAAACTTTAGCTGATAGAAGAAAATTCTGTGGAAGTTGCTGTCTA
CAAAAGGTTGGTGATTTGAATTTAATATAAATCCAACCCTACCTCAGCCT
CACCCCCTCCAATCTAATAATAAtgaaaggtaatttttttgtgtttttgt
ctTCCAGGCAGTTAGACATTCGATCGTGGGTCGTAAAAAAtttcgggttt
ccatttttccatccatttttggagtgcattcttgGTGGTGTAATTGCaaa
gccagccagcagccaaaacaaccgcgtgtaatggccagacgatctcaatc
gaacgggatatcgacgatcgaaccaaatgGAACgtaatcgaccgattgaa
atttgattgtcgaacgtaatcgaatctcaatcaaacgtcaaaattctggg
taatattcgattggtacgattgttgttcgactggttcgatcgtcgattcc
gttagattgagatcgtctggtaatGGGTGGTTAAAATTCGGccggtacaa
aatgcataaaacataatgcatattgcatactCTATCCTTAAAATGAGGCA
AAATTTCTGGAATTCCAATAACCTTTGTCTAATCAATACCAAGATTTCTG
TTACTAAACTATTTCTGAAAAGTTGTGTCATCCATTAAACATTAGgggta
aatcttttttttctggaacagCCCAATAGGTGGCAACGTATCTTCATTTC
GCATCACCTGAACTTGATCGACTCTTGAAAAGTTTCAGTTAAACTCAAAG
AATCGATAAATTTGTGGAATTTTTTGTATCTGtaattttttcctttgttt
ttccTTGGTGCGTTAGTTTTttcaggaccctgccgacgcaccggacttaa
cgatcaccggacacgcgaaagtccggtgtaaaatgagaattttttttacc
accggacaatttctacaccggacttaaggaagtcggatgtccggtgtcgg
agaaggatattttttcccaccggacaatcaaaacaccggacatgacccgT
CCggtatttcttaattttttgtttcataaatgtccggcgttcaaaattcc
ctgtatgcaacaccggacttattgcgtacggtgtagcgaaaggatacttt
ttgccaccggacaaatacaccggacagtccggtgcgtcggcagggtcctg
tttTTTCTGTGCAATTTTTGCTGTTCACaaagtttgtttatattttattt
caccattttgaaaaCATATGCCATTTTTATgtccaaaagttcaaaagtca
taatttcaaactttgaaacCACATAAAACGTGCTTGAATCAAGAATTATA
AAATATCCCGACAAAAGTTTTACCCACCGACCGACCAATTCATTTTTCGG
GTCCAAAATAACGCAAAATGAATATATTTGTTGATTGTTGCCTATATTTA
TAGAAAAACTTTATTAATTGAGTGCAAAACGAATGATTTGACAAGAAAAT
CCGGGGGTGGGGCAAGTAACATTTTTGTACCTGTAAACCTTTCTGGTCTT
CAGCAGCACTTTTAAGCGATCTGTCCCGTCCAGGTCTGCCTGTTTTTAGA
GAAACAGCATCCAAAAAGATgatgataaaattttatgtGATAAAAAGTTG
TGTTCTGAATTATATAGATGAAAGTAGACGTAACTAATCGAACATAATtg
aattcatcaaaattaatcAAACCAATGAGAGTAGATAGATGTAAGATATG
CAATAtctgttatttaaaaaaaaaaaagctatgtataaaacaaaataaaa
agattcAAACATAAAAAGTGAAGGATGTTTGTGGTATTTTCCTaagtttt
ctatttttcatgaattttttgaaaaatataaaaagttattcCAAGGGAAG
AGGTGAATTTAGCTAATGTtgtatgaaatttaaaattaaaataaaaggaA
CGGAACCCAAATGAAAATCGAGAAAGGAAAAGAGATGAAGGAGAAAACTA
attgatttcatcaaaattaatcggattcatcaaaataattgaaacaaAGC
TAATTGGTTCGATTAGTCTTGgattatcaaactaatcagtcaAATGATGT
ATAtatgttttatcttttttcagccttaaagttgatttttttctacttca
ttcttcattttcatttttgaaatctttggaATTTTTTAGTCTATAATAAT
TCACTCGTCGATATCTTTACAACAAGCACAATTTCGCTACCttattcaaa
ttctatcaaaagtaatagccttttttgtctcagctgcaaattattttgag
acagactttagaatTGTACATGATATagattgaagacaaaatttgctcaa
agtgatttttttttctctcgctTTTCAGCTCCCGATCGCTTGGAAGCCAA
ATTCTAACGTAAATTACTACGCCCACCAGGACTGAAAATCCaggtaagat
ttttttcaattaacctGTTTCTCTAGGGTACctgaaggaaagaaattttt
gcagtGATTTAATTTTGTGGGAATTAATGTTTGTAGATTGccacattttt
ggtattttcctTATATGCATTAGAATTGTACATGCTTGAAGAGaaagttg
ttttattttgaataattcaCATCGTAAACTCACATTCTCTTCTCTGGAGG
GGTGAGAAGATTAACTTAATTGTATATAAATTTTATATCATCTGCCACTC
TGGTAGCCAATAACAATTGGGCTCTGttaataatatatcctccatctCCC
CCCTCCATGAAAACCGTTCatggggggggtggaggatatgttattttttc
agtgatttacccctgcATATTGCAAATTCATCCCATGGACATGGCAGATT
TTCAGGGTGTTTTCAataccccctggacaatatcttccacccccatgaac
ggtttttttctggaaagccCATTTTATCAAGATTTCTTTCTAAAATTCTA
ATTCCATCTCTCTTTTTTTTAGGTGTCATTGATCCTTCTGGCTACGGCGG
AAGGATCATACAATCGACCAATCAACACTTAACTTTGTTACCTTACCAAG
CATACTCAGCCCAGCCCAGCCCAGCCCAGACTACTCAGCTCacaaaactt
tatattttgaaataaagaaaagccaaataatatttgttcttaattttttt
tgtctatataataccaactttcaatTGTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060154TCONS_00060154Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_336supercontigscaffold_336:19315..22743 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.05	2.15	1.44	1.13	11.3	7.76	6.64	7.44	3.64	2.74	4.03	4.29	2.87	3.51	5.48	6.4	7.25	5.34	2.25	3.58	9.5	7.31	7.77	6	0	0	6.27	2.97	3.95	5.17