XLOC_037658 (gene) - C. hemisphaerica

Overview
NameXLOC_037658
Unique NameXLOC_037658
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_331:214309..221315-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037658 ID=XLOC_037658|Name=XLOC_037658|organism=Clytia hemisphaerica|type=gene|length=7007bp|location=Sequence derived from alignment at scaffold_331:214309..221315- (Clytia hemisphaerica)
TAAGGATTAACAATTAAAATAGATCATGTCAAAAAAACGCATTGGAAGCA ATGGTCCTGATTGGAATAAAACTGTAAGCAATATTAATGATATTTAAATA ACTGAAGCATCTTTGTTTTACTAGGAAATTTTAGGAAATGTATTTGATTG ATACAAATAATGTTTTTCATGGTACTCTTTATTATTTGAAATCATTCAAT AAAATGTATTTTAAGTTTGTGATATTTGTGATAGTTGCAACGCTTTCACC TTGCACAGAATAATATATATTTCTATTGATTGAACATACAAGTTTCTATT GCACATACAAGCTTCATCTTTTCAGGTAAAGTATATTGAATCTAAAAAGG ATCGCAATCGCAGAAATCGAGATTACATTGAACAAGTAGAAAAAAGGGTA AAAATAGTGTAAATTTACTATAACATGGATAAAATAAAGATTATTTAAAT TTTATTTTTAGAAAGCACTCTCCATGCTAGAGTGTGTGGATTTCTCTACT TTTTCTATGCAACCCTAAACTGGCTACAAAATTAAAGATTTCCACATATA CGTATCAGTTATAACTAACACTTAGGTATTTGGCTTTCAAGAAGGTAAAT TGCATTCCTTAATAATTGCCCTACATTCCCAAACCTCGGAATTCAATCTA CTGCAATCAAATTTTAAATCCGTATCTGAAAATTGACAATCGCTAGACTT GGAAATCAATAATTTGTCATTAATGGATCTTCTTATACAGAAAAAAAAAT GTTGGGGCTGACTCAGAAAAGATTTCTTGGCCTCCACTGATTTAAACTTT TCTAATATTCACCAGGCTGATGAATGGGATGTCTATTGCAAAACAACTGT TGGATTTGTTGTAATCTACGAGGAGAAAATACATTGTTGTGGTAAGGTTG AAACTATTTACCTATCATACAGAGTATCTTAACCTGTATTATTATTGCAA TATTTTACCTTTGTTGCACCATAGAACATGCGAGGAAAAGAATTCTATTT CTCGTATGTACTATATTTAATAGTCCAATAGTTCTATCTATAAACTACCT TTTTTCATTTGATTTAAAGAGCTCCACCTTTACTTTAAAAAGGTAATGAC GAGTCAATGGTAAATTTTCTGAACGACAAACGGGTACTGGAGATTCTAAA AGAATATTGTCCATTTACAGGTATTGTTTATGACTATTTTTTTCTTGTTT CAACTTTTTTGAAATAAGTTTTGAGGACACTAATAAGTAATATTGAAAAC TTTAGGCAAAAATATGAAATGATATTGAGAAATTTTACATATAGACAGCC CGGGTTGTATTAAATAGAATCCATTCAGTTGAGTTTAGGATGACGAGACG TAATCTTATAATATTTCTACTCCTTAGATAGGTTAGAAATGAAGAAACCG TTGATCCAAAAATGTCAAAAAAGGACGGGTAAGAAAAAATGCTTTTGAAA TCTTAGGTAGGGGTCAGAGGTCAGGGTGGGTGTCCATAAAAAATTTGGAA ATTTTGATATGACTTTGTAACTTTTAATGAACTAAATTCTAAATGGGTCA CGTGTTTTGGATGGAAAATAAGTGGCTTATTTCCCATTCAAGAGATTTTA CACCCCTTCGTGGATTAAAGCACAATGGTAGACATCCATCTGCGCTATAT GGTGTCACTTGAAATTATGTTTCAGCTGCTACAAAAGAAAGAAAGACAAA AAGGAAAACTGGAGGAAATCACAACTCTACCAAAACAAGTAATGATATTT ACTTTTATTACATTGTAAGAAGAGAAACAAGAAAGTAACGGAATATCATT TTGTAGTTTCTCAATGACGAGCTGTAATCAAAACAACAAGTTTTTACTAT TTCAGATAATGCAAAAAAGAAAAAAAAAGAAGAAAAGAAAGTTAAAGAAA AAAGCCATACTACTGAAACAGGTAAACATTCGCCACAGATACTCTGATAG TTAAAAAGGTATATTACCATAAAATCATGGTGAATATTATTCTTTTATGC TGTGGCTCCTCTGTCTTAAAAAGGTAATACTTTCTGACAGCCTAACCCAT GTTCTTTATTATGATACCTAATTGTTTGTTTTAGATGATATCTGCTGCAA AGACTTTTGCTTAAAGCCAGAATTCTTTGAAACCTTTGTTTGCGACAAGT GCCACAAGACTTACCACAACCAATGTGTAGACCCTCGAGGACAATCATGT GGATGTCATTTGATCACTCCTCTGATCGTAGAACGAAAAAAAAGGTTTAT TATATTGTTTTGATTTGCATTCATCATTTGAAAAATTTAACACTTTTGAT TAGAAAATCACCTGTGATTCGTTAGGAAAGTTTATTTTCCCTATCTGAAA TTTTCGAAGTTGTAATTTATCTTGATTTCAAACAGGTTATCATGGTTGGA GGATCTTGTGGAGTTTAAAAAGAAGTATTCAAAATCTCGCTTTGAAAACA TGAAACGAGTTGTAAGTTACTGCTCAGAATTTTATTTCTACAATATATCT TGGAATAATATATAACAGAGAAAAATGAATGCTCCTTCTGATATACGATA CCTCTTTTTGATATCGACTTTTGCATTTGCACACAATAAGAGAAAAGAAT AGGTCGATAGTTTGAAGGGACAATTGGTAAGACCATATTTTTCTTTCATT ACAGATATCACAGCGTAATGGTGGATACCATGAGTCCGTGTCATCGACCA TCTTACCATTGTTTAAAGCAAACATTGTACGTATGACTTTTTTAACTTTA ACTTTTAACGACTTTCTAAATTGAATTCTGTTAAGAAAGTTCTGAGAAAC TGATAATTATTGAAACTTTTTCAGGAGTGTTACATCATTAGAGTCTCTTC CGTCTGGGAAATGGCTTTTTTCAAATCTAATACCAATTCCCACAGCACTT TGATTTATTTTTTCGACAGTAGAAAGNCCCTCGAGGACAATCATGTGGAT GTCATTTGATCACTCCTCTGATCGTAGAACGAAAAAAAAGGTTTATTATA TTGTTTTGATTTGCATTCATCATTTGAAAAATTTAACACTTTTGATTAGA AAATCACCTGTGATTCGTTAGGAAAGTTTATTTTCCCTATCTGAAATTTT CGAAGTTGTAATTTATCTTGATTTCAAACAGGTTATCATGGTTGGAGGAT CTTGTGGAGTTTAAAAAGAAGTATTCAAAATCTCGCTTTGAAAACATGAA ACGAGTTGTAAGTTACTGCTCAGAATTTTATTTCTACAATATATCTTGGA ATAATATATAACAGAGAAAAATGAATGCTCCTTCTGATATACGATACCTC TTTTTGATATCGACTTTTGCATTTGCACACAATAAGAGAAAAGAATAGGT CGATAGTTTGAAGGGACAATTGGTAAGACCATATTTTTCTTTCATTACAG ATATCACAGCGTAATGGTGGATACCATGAGTCCGTGTCATCGACCATCTT ACCATTGTTTAAAGCAAACATTGTACGTATGACTTTTTTAACTTTAACTT TTAACGACTTTCTAAATTGAATTCTGTTAAAAAAGTTCTGTGAAACTGAT AATTATTGAAACTTTTTCGGGAGTGTTTCATCATTAGAGTCTCTTCCGTC TGGGAAATGGCTTCTTTTCAAATCTAATACCAATTCCCACAGCACTTTGA TTTATTTTTTCGACAGTAGAAAAAAAAGTTTTTTCACTACATTTTTTACT TTTACTTCGTTCTGTTATAATTACTATCATACTTCCATAATAAAAGTCAC CAATAATTATCCAGATACTAGATGAGAGACTGTAAGGTCTAGGTTAGACA TCCGACTTTCTGCCTTCCCTCATTTTTGACAAAGTCGACAGAGAGTTGAC TGTCCAAGGTCAATACGACGCCTTCTTTTGGCGTCAATGCAATGTCTTCT TTCAAAGTTTTTTCAAGCAAAGATTTGGGCTGCCGACTTTCCGTTGATCT TCTGCCGTCTCTCACGTCAAACGAAGGCAGAAATTCGGCCGTCTAAAGTA GGTCTTAGTTAATCTTAAGCTTTTAGCTTTTGAAATGTTTGGTGTAACTT TACATTTTGATTTTTTTAGATTGGATATTTAGAAGATTCAATAAAGGAAG TGCTACCTGAAGCTGATTATACATTAATGAGACAATTTCTTCTTCCAGAG GTAAAAAAGTACTTCGAGTCGTTAACCCCTTGAAACTTACAAGAAATAAT TTAAAGTGAATTTTTGATCAATTTCATTGGTGATCCACCCAATATGATTT AAAAGTTCGCCATCTAAATCTTACTAAAGCCCTTTTTAAATTAGCTGTCA GTAAAATTACAATAAGCCTTTGTTAGATTTTGAATTAGATTGCGATTTTG TGCTCGTTGGATATAATTATGTGAAAAAAAAACTTCAAAAAAATAACCAA AAATGAAGATGAAAAAAGAAAAAAATGCCGTTACCGTCAGTGATGATCCT TTATTTATAGAAGATATCACCACATAGTGTCCTCCCCCCCCCTTTATAAA GGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNTTTGAATGGGTGAGGGGGGAAAATGAAAATTTGAA TAGTAAAGGGGGGAAAAAAAGAGGGGGGAAAACATCGATAGTTGGCAAAT TTGGTGGGGGGAGTGTGAAATCACATCAATTTTATCTCAGCAACCAAGGT CAGTCCACATGATATCATGTGATTAGATCATGATTGAAAATTAACCAATT TTCGTTCTATTTTGTCTAGTATTCCTTTTNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATCTCGG AACTCGTAAAATATTTCTCATATTGTACTCGCAACTGTCCGATAACTATT ACTTATCGGCGATCCAAAAAATATCTGCAATCTGATTGGTTAAAAAGAGT ACAATATATCTTGTATTTTACATGTAAAATATAAATTGATGAAAAGATGT TGTTGCATTGTAGCGGTAGCAGCAATCTAACGTCACTTTGCTACAAAAGT GCCCTGCGCTTCTTTCCAACACAAAAAGTGCATTTTTGGGTCACCGATAA ACCAGTTATCAGACATTTGCTCGTACAATATGGAAATATTTTACTCGTTC CGTATTTTCCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNGGAGGGAAATGATATTTTCAGAATTTTCTGGGG GGAAAGCAAAAAAGAGGGGGGAAACTAAAAAACTGAAAAGTCATAGGGGG GAAAAAAAGAGGGGGAGATTTAAAAAAATCAAGAATTTGGTGGGGGGACA AACCCTGGAGGACACTAGTCACCACTATGATAACATGAAAAATAATTAAC TCGATCAAAGACCACACCATGGAGGTGTTTTCGCTTTCTTTGATGATCTT TGGAGTCAATTGGCTCTAACTTTTGATTGAATAGATACATATCTTCTCCC TAAAATACAATTTATTGCAAATCTAATGCAAATGTAGTTCAAATCCAATT CAATGTGGTTCTACTAACAAAGCATGAAACTTAGATTTCCCTTGTCCTTT TGCATGGTCTTACTTTAGGGTACCTAATAAGCGTCCCCCGCTAGTTAATT TTTCGAAAAATTTTCACCCCGGACATTCTTATTCCAACCTCCCAGCTTAT TGATTTTTCGGAAGATGTTTTTGAAAGTTTTCTTTTTTGCCCAAATTCTT CTGTATTAACCTCCTTTTCAAAAGTTTTCCTTTATACTTATTTCGATTAT TAGGTTTCGAGATTTTTTTCACCCACCACGCTTACTTTAGGCGTACAAAC TTTCGTGAGCAGAAACTTTCGTGATTTTCACGAATTTTGGCCCTTTTCAC GAAAGTAAATGTATTTAAAAATTCTAGGAAGGACCATTGGCGAAAGTTTA TGCTCGCAAAAAAATCTTGACGAAATAGATAATTTGTAAATCTTCAAACT TTGAATAAAATGTAACTTTTATGGCACTTTTTAGCCTGCTATAAGACTAA TAAGTCAAAGGACAAATGTTTCAAGCCAATCCAAGAAGTATTTGTCCCTC TAAGCCATTTTTTCTCAATTCTACGTCTTGATTCGCGAAAGTTTAATTTC GCGATTTTTCGTCCTCGCGAAAGTTTCTGCTCGCGAAAATTTGTACGCCT AAAGTATTCCAGCCCCCCCCCCCCGTTTATTAGATACCCGAGAGTAAGTA ATTTGCTATTGGCTTTTTTTTACTTGAAATTTTCTGAAGGTATCTTCTAC CACCTGAAGATTTAAGCGAAAAAAAAGTATATAAATGCTGATATCCCAAC TTGCATCTTCAACTTTTTTTTTGTCTAAAATATTTCATTTTATTCGTGTG TATGATAATTAAGACGGGGATTTACACACCTTGCGTCAGTGTTTGCCACG TCATTGAAATTTACAGGATATTTTGTACTTTTAGATGATGGTCCGCACGG TATCCATAGAATGCAAATGTCCGATGTTGGCTGTTCGAAGGTTGTTTCTG GAGAGGATTTTTATAACGTGATGCACTTTACATAACTAGTAATTCTATTA ACAAAATTTTGCGTTTCAATGAAAACTTCTTTGATAAAAAACAGTGAGGG TGTTCTAGAAAAAAGCAAGAATAAGATAATTCAATCTTGTCTGGTTCAGA TTTCTTAAGAGGTCACTCGTTTTCTACGTTTTCGGTACATATTCTTTGTT TTTACCACCAAGTACGCATTTGCCTTTCACCAGGTTTTCAAAATGCTTAT TCTATAAACTTAGACTATCACTGGGCTATCACTACCTGGTAAGGTAGTTA TTTCCAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059884TCONS_00059884Clytia hemisphaericatranscript
TCONS_00059883TCONS_00059883Clytia hemisphaericatranscript
TCONS_00059882TCONS_00059882Clytia hemisphaericatranscript
TCONS_00059881TCONS_00059881Clytia hemisphaericatranscript
TCONS_00059880TCONS_00059880Clytia hemisphaericatranscript
TCONS_00059879TCONS_00059879Clytia hemisphaericatranscript
TCONS_00059878TCONS_00059878Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059882-proteinTCONS_00059882-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_331supercontigscaffold_331:214309..221315 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 2.1 1.47 1.48 2.08 1.82 1.6 1.5 1.76 1.16 1.1 0 0 0 0 0.04 0 0 0 0 0 6.67 6.34 0 0 0 0