XLOC_037567 (gene) - C. hemisphaerica

Overview


Name	XLOC_037567
Unique Name	XLOC_037567
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at scaffold_330:114935..122738-

gene from alignment at scaffold_330:114935..122738-

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_037567 ID=XLOC_037567|Name=XLOC_037567|organism=Clytia hemisphaerica|type=gene|length=7804bp|location=Sequence derived from alignment at scaffold_330:114935..122738- (Clytia hemisphaerica)
CCTGACCACCAATAGAAATATCAAAGAAAACAACTGGATTTGATGGATTC
GTTGCTCCCGTCGCCATCTTTCTTTTTCCCGCGAGTGATTCTATTTGAGC
AGAGTGGATAAATTCTCTGTGAAATATAGAGAAAGTTAATAATATTTTTC
ACTTTATGGTAAAATTTAGGAAGAATTGCATTCAAAATTCAAAAGAATTC
TTTGAAATTTGTTTTATAACTTTTCCAGTCAAATATTCTTCAAAATAGAT
GTAGTGAATTCAATGAAATAAACATCTTCAATGATCTTTGTGGTTCTAGT
TTATGACTTTTAGAAAGTTGCGGGCGTTTTCGCGCCAAATTTTTCACTGA
ACAGCTGATGATCAGTTGACATTTTTCGGCTAGATTTTTTGGTAAGTAAG
TTCTTTATTCAGCTAGAATTATAGATACTAGCGCTTGTCCATGCGTTCTA
TTTGACTTTTATTTTTCTACTGGTTAAAGAAATCTTTGTTGTATGTATAC
AGTTCCTTGTACTTAGTTTTGAAGCCATCAACAGCATCTTTCCTCCAATC
TTTTATAAAGCCATTAGCATTACTGTCAACTGCTCTAACTTGGGAGGATT
GGTCAAAACATGGGACTGTTGCATATCTGGTCTGTATTTTCACTTACTGT
AAAATCGAAAGAGAAATCGTGCATTTTTTAATACGCCGTTCCTTTAACTC
AAATCTAATGACTTTGGAGGTTCAGTGAAATGGTGGCCGAATTGCCGTCC
CATGTTTTGTCCCAAGTTAGGGGTCATGTCACGTCAAATTGACGCTAAGG
GGTGGGTGGGTTAGAGTCTTTGACGCTAAGAAATTTCACCAGAAATATCG
ATTTTTAATAGGTTTATTCCGTGACAAATGTTACTTTCCATATTTCTTTT
CCTCCTTTTACGTAATAGTTATCGGACAGTTGCGAGTACAATATGAGAAA
TATTTTACGAGTTCCGAGATTTTTCTGTACAATATTTTCTGAGCCTTTAG
GCAAGGAAAATATACGGAAAATTCGGAACGAGTGAAATATTTCCATATTG
TACGAGCAGATATCTGATAACTATAATCTGATAATCAAGAAACTGTGAAA
ATCAATTACAAAACCTACGTCACAACCACAGAGTGCTGACTTTTAGTTTT
AATGACTTGTTCTCACTTGTTTGGTTTCCGTAATAAAAAGAAAGTCGTTA
TTGTGAAATTTGAACATGCTTTAAATGGAGGTATTTCCACTAACTGTCAG
TGCCTGGCACAACGGGCAGCTGTAAAATCCCACCCTTCATATATTTGTTT
CAATAAGTGATCCTAAGGCTTAGGTTTTTTCTCATCTTCAATTTACTGAA
GAAAGAATTTGATGGTGAGAGTTAGATTGTCAACAAAGTCAACAAAATCA
TTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NGAAGCAATCAACGTGGAGAAAACGTAAATAAACAAAGCTGTTGCAAGTT
AAGTCCGTGTTGCAAGTTATGGCCGTTTACGGTACATTGAATAAAAGAAG
AACTTTAAATCTTAAATATTTTCATTTTGAAGAATTGTTGCAAAAATGTG
AAACATGGAAAAGTTTCATTTTTTATTGGTTCAATCGAAATAGGTGATTT
GGAAAACTTTCTATGTTAGGTTTTTTGCACAAACCCGTTGCTAAGATCGA
AATTGAAACTACTGAAAATGCAAGTAAAATCAGCCCGCACTCCAAGTCCC
GTAATCTTGATGTAGGAGTTTAAGCATAGACTGTCAGTGGTTAGGTTTCA
TTTTCGATTTCAAGCCAACATCTTAGCAACAGGGTGCTCGCCCATAATTA
CAGGGGTTTGTGCAAAATAACAAACATAGAAAGTTTTTTCAAAATTCCCC
ATTTTGATTAAAGCAATAAAAAAATTAAACTTTTCCATGTCCAGGCATCG
GTTAATGAATTGTACGCTGCCAGAGGCCAAATCCATTGAACACAATTGAT
CACAATCAAATAATTGGTTGCCATTCAATTGTCCGAAACAACCTTTTCAC
CTGTTGACTTGAAGCATCAAAAATCTCAAACTCATCAAAATGAAAATTCA
ATACCACCAGACAAAAGCTCTCAAAGATTGACTTTTCTGATTACCTTCAA
ATTTACAGATGGGTACACTCTTTTTTTATAAGCATGCTTAGGCTCAAAAT
TGCCAAAAAGTAAGCATAATGCTAAGCATAGCTTGAGGCTGAGGAAACTC
ATCAAATTGCAAAAATAGGGTCAGCGAGACAGTGAGGTAGACAAATGAAT
GAATGAATCTTTTGCTCTATTTGCATAATAATGCATTTGTGTTTATTTAT
CTTTTTATTTTTCCCTCCTCTCCCAATATCCAAATTTTAAATTTACAAAC
CCAAAGAAGCCAGGGGGATTTGATGGCTTACAGGAACTTGTCGCTGAATT
GTTTGAAAAGTGGACCCTGTCAGATATGAATTTTTGGTAAATTTGAGACC
TGGGTGGTCAGAATGAACCATTTTCACCCTGAATAGGGCCAAAAATGACT
AAAAGTAGACCAAAAATTGAAAATATTTCTAATTTTCACCCTGAAAATTG
TCCAAATAACAAAAAGTTGACCCTGTCAGATACACATCTTGAAAATTAGT
AAATTTGGGACATTGTAAGATATTTTTAGAGCCTAAATAAGGGACCCTAA
CCTGGCATGTCCCGTACCCAACTAAGTACATAAGCTAACATCAATAGTTG
TTTCATTTATATGATAAACCCATCAAGAATACAATAAATTAAACATTGGT
ATTATTCAATTAATCAAAGTAGCCCTCACCAGCTATGATCAAGAATTAAA
AGTTAAAAGCTAACCTTGACCATTTTGTACTTTTTATTTATAGAAAATAA
TCTCTAAAATATGGATGAGAGTGAAGAAAGGAAAATTAAAAGGGCTGCTG
CTAATGTCAACGAGAGAAGGCGGATGCAAAATATCAATTGTGGATTTGAA
GCTTTGAGAGTAATTTTGAATGTGGAAAACTCGTCCAAACTTAGTAAAGT
AAGTCAGTGTTTTGTCTATGATTGTTGTCTATGTACGTGTATATCTTCTT
TCATCAAATTTACTTTTTAGACAGGCAGCTGAGGTCACAAAAAAATTGGA
CGGGGTGCGAACAATCCCAAACCACTTTTAATTGAAAATATACAACCTAA
ATATCTAGAAACCATCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTAGTACCTGATGACGTC
ATGCGTGCCCATAGGCTAACTGAAAAAAATTTGAGAACCAACATAGACAT
ATTATATACCGATCGAAGCGTTTTTTAACGTAGATTTAGGAAATGGTCAG
TAACCATATCTGAAAATTTTGCTATAAAAAGTTAGAACGCTTTTCTTTTA
TGTCCGTAACGTCAATTTTACCTGTCCGAGACGAAAAAAAAATCAAAAAT
TCAAACTTATCAAAATTGAAATCTAAGACCTCCATTCAAAAGCTCTCAAA
AATCGATATAGAAGACTTTTAAGTGGATATATATGATTTCTCAACTTAAC
TCGAGAAAATCGATCCTAAAGAAAGTGTAAATATGACGTCATCAAAACTT
TGGAAGCTTGTAACTTTTTATTATCAAATTTTCAGACATAGTTACTGACC
TTTTTCTTAATCTACGTCAAAAAACGCGTCGATTGGTATATAATATGTCT
ATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTTCAGAAAGGTCGTATCTATTGAAAACAACTG
TTTAAAGTTTGTTCGCAAACTTTGTAGCTACTGCACTTTTTTATGTGACC
TCAGCTGCCTGACTATTTTTCCAGAGTTGATATTGTAAATAATGTTCAAT
GTTTATATTTTTTTCTAGAGTGCAATCTTACGTCATGCTGTTGAAATGTT
GAGGAACTTGATGTCTGAAAATCAACAATTACGTGATCAAAATCAGTTCA
TGCGCAATCTTTATTGTAATAACAACTACAATTCTCAAACAATGCCTCCC
TTTCTTCAAACACCAACTTCAACTCGTAATCACAAGAAATCAGAATCATC
AGAAGAAAGCCCTCGTAAAAGGTTGAGACTTAATAAAACAGACATCACTG
AAAATACTGATCAAAACCAAACTACACCAACAGTTCGTTTTAAATTACCA
GAAACATCCGAATCACCGGCCAAATCACCTAAGTCACCTCGCAAATATTC
TGCCAACATCAACAAGTTATTAGCTTCTCCAAAACGCATTACCAGGTCTT
CCGTCATTCAACAAAACCTTGCTTACACATCACCGACACAACCCATTTCT
CCACACAAGTTACAACAAACACCAATCAGTAGTATTCTTGAATCACCAAG
TCGACGATCCTTGCGTTTGATGGAGAAAGACCAACAACAACTTTATCCCA
GTCCCTCACAACCATTAGAAACCCCTCCTGCCATCAGATTTACCGACAGT
TTCTCTCACCAACCATTCTTCTATCCAAGTTCTTCAGCTAAATCGAAATT
AGATTTTGAAGATTATCGCAACTTGATCTTAACTCCTGAATCAATGAAGA
TGATGCCACCAAGGAGCGCTAAGAGAAGTTTGGATGCTATAATTCATGCT
ATTGATCAGATAGAAAAGTCATGAACGAAAATTAATTGATTGTTTAAAAG
ACATGTCCAGATGGATTTAAACCTGCGATTTCAACCACTTTATGTGAAAA
GAGAAGGTGGAAATAGAAGTTTGCATCTACCTTAAAGGAAGGCCAAAAAA
GTTTTTTCAGAGGGAATTTGATTTGGCGGATGGACGAAAAAACTAAATTT
GGCG

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00059722	TCONS_00059722	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
AP4	TCONS_00059722-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_330	supercontig	scaffold_330:114935..122738 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
23.92	21.95	34.25	31.24	20.35	16.84	14.65	16.78	9.96	11.84	7.37	6.89	4.82	5.83	6.58	6.08	10.17	10.25	3.94	4.59	6.96	7.85	15.47	14.45	10.3	11.89	4.05	3.59	10.7	12.35

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XLOC_037567 (gene) - C. hemisphaerica