XLOC_037557 (gene) - C. hemisphaerica

Overview
NameXLOC_037557
Unique NameXLOC_037557
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_330:403743..407910+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037557 ID=XLOC_037557|Name=XLOC_037557|organism=Clytia hemisphaerica|type=gene|length=4168bp|location=Sequence derived from alignment at scaffold_330:403743..407910+ (Clytia hemisphaerica)
TCAATAGAAAATATATGAAATGAAATAATAATACAGAATGGTGACTGTGA
TCTCTACTTCAAATAAAGCTTGCTCAAACCAAAAGAATGGTGATGCATTG
ACAAATAATGATCACGAGAGGAAAGAAGTCCTTTTAAATCATGGCGATGG
AATATTAGATGCTGGACTTCTCACCAAATCTAAAAATGCTGTTTGTTATA
TCTATTGTAGTAAAGAAGAAACCGAAAAGTATGATAATAAGCTCATCAGT
TATTCCTTTTCTTAAATTGCTTCTTTGCTTATAAAGCTAGCAGCTACGTT
tgtatattattattatactgGGTGACCCAGAAAAAAAGTATAATGGTTCG
AGTTAACTGTGTCCAAAATAATGTgaatttttactttattcttTTTTAAC
AGTCAAGAggaaagacaaaataaaaatttggcaTATAGCTTTTGAAATTG
GTACAGTGGTTCTCAAGTTAAaagcttttgaagtcaaaattcactttaga
aaaacgttttctcaaaaaaggggtatcaaattatGCATTTGTTAACATTG
TCCACTAAACTCTTCTCGAAAAATCGCTCATAATTACTGTTTTCCTATTA
CCGCCATAATTTTTTGAGGATGATTTTTAAAAGTCAGCTGAGATCATTAA
TTGAGTCGTAAAAGTCATTAATATATTGAAACTATGAGGTTCCCTGAATA
GAATTGCGTTAACTTGATACCccatttttgacgtgtttttggactttttc
aaaagcAGATTTTTACTTCTAAAGCTTAAAACTTGAGAAccactgaacca
aatttaaaaagctgTATGCCTTTCCTCTTAACAATGACAAAAGAATTCAT
TAAAAGCTCACGTTATTTCGGACACAGTTAGTTTAGCTAACCCTTATACA
TTTTTTTGGTCACCCGGTATACTTCGCTTTAAGCATAATTGTCAATGTAA
ACTAACTTCCAGCTGGAAAAATCATATGTAGTTCGGATCCCCCGTTCTTT
AAGGGGAGAGATGACACTATCcgaaaaagtgaagaaggggatcagaaatt
ttcatgaaaaagtcaaaaagaagaaagaagtttattatttcgctttctct
ttctctaaagatatttcacatatatttgttagctatttttttCCAGAATC
CTTGGGGGATAGTCATGTTTAAAGGTTGGGGGAATGCGAAGAAGGTTGgg
atcgtttaagaaggggggggtcagacccctttcTGCACTatggaaaaatt
ttaattcttttatgGAACTATTTGTTTTAATGATCTGAACATGTTCCTGA
ATATGAATGCCAAGAAGAAATTTGACAAATCCACTTTTGATAACTGAATT
GTTTTGATAAATCTTCACTAGGAGAGGTTCAGGATTTTTTGCGCTTATCA
CCTTGAGTGGTACTGAGCACAAAGTCATCATTACAAACAATCACGTGCTT
TGCAATAAAGAAGAAGCCGCATGCGCAGTAGCTCGTTTCCATTACGAAGG
GAAATTACCTGGTGCTGATATCCGTTTGAAACCAGAACTGATGTTCCATA
CCAATGATGTAAGTGAAGAGCCACTATAACCTAAATGTCcccttaattcg
aacaagttttctcgtcacTGTAGCTATGCCTTACTCTATAAtatctataa
ctcgaaatttcctcaattttaacaaatttgtgttccctaAGTGGAAGAAA
CTCCACTGTATTGACACATGGCCCACTGTTCCTGTTATGTCAGGTTATGT
TCTTGTTTGGAAATAGCATTTATTTTGTTTCAGTTTATGATTATAGTTAT
TATAATTTTAcgattttagaaaaacttttttgtgtcATTTTACTATGTTT
ATACTGCTTAGGTTTTCGAATGACTTCACACTTTTAAATTTCCATTGCTT
CTATGGTAAGCAGTCTCTCatggtgaattttttttcaggtctTAGATTAC
ACCATCATTGGATGTGATGCCGATACAATCGAAAACCGTTTCTGTATCGA
TCCCATCGAATTTACTGAGGAAGATCCCATGAGCGTCGGAGATGATATTT
TCATCTTTCAACATCCTAAAGGTGATACCAAGAAATTCAGCTACCAGAAA
ATCTCCAGAATCGAACGCCCGTATGTTTATTATAATGCTGACACCGATAT
CGGTTCGTCTGGCTCTGTAGTTCTTCGTAAGTTCAAACTGATAGCGGTAC
ATTCAAAAGGTAGTGATTTGTTGCAGTATAACAAAGGCACGCTGTGTAGT
GAGATTTTACATCATTTACGCACGGGTACATGTAAGTAACTTGTTTTTAT
GTCCAAAATTTGCGTTGTGCTTTCTCCttcttttgttgaatttcacCTAC
TTGTTTCCTTGGTCTATCTTTAAAATGTCAACCCCTCTCCCTTTCGTCCT
TTAAAAAGGTAAGGTTTTAAGCACCCAAACGTATGTTCAATAGTGAAACA
AACTAGAAAAATCTTATGATTTCAAACCCCAGTAGCACTTTCAAATAACA
CACTCAGTTCTTGCGGGACTTAATATGTCACTCCCTTTTATGTTAGATAC
ACAACCAGCCAGCTTTTCATCAGAATCTGCTTGTcaaaaaaagaaacgaa
aatcTGACGTCTTAGGTATGTATGAGAAATGACTTAGTTCGCGTTTCATG
GCATTGAATGCTCTCTATGAAATGTTTCGAATGTTTAATAAATCACCATC
CAAATATTATGCTAATCTTTCTAAGCCCTTTATTATGCTTTAGCAATAAG
TCTCTACAACTACGTTAACAATTTTAGCATTTACTATAGCTCTTGTTTTA
GGTGTTCGGTGATTTGGTCTTCCGAGAAGGTCGTAAACGCTGCACCAGCA
TGCATCTCCTCTGATATGATTCGATaaaggggatgcgtatcgtctacAAT
ATTTCTGTCCCGACTTACCCCCgcctttcctttttcttttttgattaagT
GTCATAGCAATACAACGActtctttttgtctttgttcAATAAATGAAAAG
TTATAATTATAATGGATGTGACGAAATTATGCAAATTTATGCAACTTTTG
GGTAACTCTCGGTCGGACGAGAAattcatacacgatacgcaaCGCCTCTA
TCAAAATCAATTCCGGAGATGCGCGCAACCTAAGAAGGGCGATCAATTac
tcttatcggagtttttgatttttctaaaaaagcgatgcattgtgggattg
tttcgggagaattacttacaatagaattccctcgaggaattcctaagaga
tttctattgtaatactaccgaaacaatcccacaatacatcgcttttttag
aaaaaatcaacAACTCCGATAAAAGCACTTTTTTTAAGAGGGCTTCCGAG
acaaatttattgaatttatttttcaggaGAATTAGAAACAGCTAACAAAC
GATCACGTGACACGGAGAACACCTTACAACAAAACACTTTCAATGATCAT
CACATAAACACCGTCAAACCAACTGAAGACCAACTAGCTGACCTTTCCAA
GGAAATTGTGGCTTACTGGAAACATTTAgcaagaaaattgaaactacCGA
ACTGTGAGGTGCAACGTATACAAAAAGACCATGTCAATTATGATGACATT
ACTGAAAAAGCCAACGCAATGCTGTTAACTTGGTTGGAACTTGATACAAA
TGCTTACGTCAGCACTTTGAGAGATGCGTTAATCAGTTTGGGTAAAAAAG
ACACAGCTGTCAGACATTTCCCAATGTAGAATTGCTTCTCTCTTGAAATA
GATCGAGattaaaagctattttaaagGGGAGTAgaacaaatattttagaa
tttgCCTTTTATGACAAAAATTGGACCCTGAGGTTCTTAGCCAAGAATGG
CATGGCAACGGAACcagttattttatatttttaacacAAATTTTATTCAC
ACTTACACTCTACGCACCTTAGAAGAATATTGTTTTATTCTAACTTTTTA
TTTCGctattgtttttttgttgttttgtacaTAATATCGTATTTATAATA
GCTATGTATTATACcatttttgaaagtctttattattatattataaacCT
TATACTATGCTTACAGGTAGTTcaactttttactttttgtaCATAATATT
AAACTTTAGACAATATTATAAGAAAACACGGTATAGAAAAGACTATATTG
TTATAAGCCTTATAAATA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059698TCONS_00059698Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059698-proteinTCONS_00059698-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_330supercontigscaffold_330:403743..407910 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.23	4.1	1.48	1.31	25.38	17.16	18.96	20.38	22.81	21.04	17.87	16.94	17.27	17.59	19.05	21.21	24.73	25.34	12.68	14.67	17.88	17.12	16.33	15.21	12.45	12.92	6.59	4.12	9.5	9.28