XLOC_037548 (gene) - C. hemisphaerica

Overview
NameXLOC_037548
Unique NameXLOC_037548
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_330:164835..173639+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037548 ID=XLOC_037548|Name=XLOC_037548|organism=Clytia hemisphaerica|type=gene|length=8805bp|location=Sequence derived from alignment at scaffold_330:164835..173639+ (Clytia hemisphaerica)
ataaatagaataactagattgtaaggaagattctaaaaaaaattagctgt tttcttagacgactacgttaactttaaatcttaaatattttcattttgaa gaattggtgcaaaaaagtgaaacatgtgaaagtttaatttttttattggt tCAACCAAAAaaggggatttggaaaactttctatgtttgtttttttcgca caaacccctgtaaagTATGGGCGAGCACctcgttgctaagatgttggctc gaaatcgaaaatgaaaccactgaaaatgaaagtaaaatcggctcgcactc caaatcccgtaatcttgatataggagtttaagcatAGACTGATGGTTTGA AACCTGAGGCAATCAACCTAtcatgtttttaaaacattcttttatttgaa attattgatgtacttcttttgttaaaacttCTACCATAAGTTAGTCTTAA ATATTGACGCCCCTCATCTTATCCTGACACCCCTGATCAGTGATTTTCAC CTTCCTTTTATTCTATCAAATGCTAGCAGAATAATaccttgaaattaaaa aaaaaaacggttaaaaTAAGAGAGAAATTGATCATCGTCTTATTACAAAT TTTGATCAGTCTGAACTAGGCTTTGAATGACTAAAGTTAACTAAACTAAA TCTAGTATTTATTTTAGAGAGAATCTGTCTCTTGAAATCATTTTGGAGAC ATTGTTATAGGCTACAAAGAAAGTCTTGCTGAAACCATGTTACAACTTtg aatttcaacaacaaaagatACATAGAAGgtgaatttttaaatatggaaGT TGAAGAGCACCACCCAAAACCTAGGAGAagaatgaagcaagttttgaaTG ACATAAAAGAAACGGTAATTATCTTAATTATCTCTCCATTTTTTCACTCA AACTTTGTGGTACTTAGTAATATTAATGTATTTTTATTGAGATTAAAATG GATCAAagcaatatttatttttgaatttaacaCTTAGCTTTTATTTTAGG TGGAGTTTTATTTCAGTGATGCAAATCTACGACGTGATAGGTTTTTCAGA AAAGaaattgaccaatcagaagacGGGTGTAAGAATGAGTTTTTGGTGAA TTTCAACTCTAGTTGAAGTTTTAAGTTTCTAAACTTCACTGTGATGTGAT AGGCTAgatataattgtttttttttaaggtttAACTTCTGCATAGTTATG CATATAGTAtcctttttcaataatttttctaaTATACTCTATAATGATGT ATTTCCTCCAATTTTCAGATGTTGACTTCAAAACTATACTCAACTGCAAC AAAGTAAAGAGCTTAGAAGTTGATGAACAGACATTAACTAAAGCTttaga aaattcaaaagttttggaggtttgaatgttttttaatTTCACATGTTCAT TAAATATGTATTTACACTTCATTCGAAAGCATGAATAAAGTTAATGGAAT CATTGAAAAGTTATTTAATGCCTTTAGAGGAAGTGGTTTTGGAAAGGCAA ATTTATTTGGATAAATAATTCAGAAAATGACTCAAATTTTCTCAAgttga aatatttacaaaattaaattttgtaaaaaatctgttttaTAAACATCACA AAATCATCCTccttttttgataatttcacAGCCCCCCTTATATTaattgt tttcttcatttttaacaaGCNctttttgataattttacagCCCTCctttt attgttttcttcttttttaacaAGTTGAATGAAGAGAAGACAAAAGTGAA GAGATGCACCACAATACCAGAGCTAAACTCTGAAGAAGCTGACTCTAGAA TCATCTATGTTGTAAGCATGATTTTTAGTCAAGAACTTTTTAACACAGGA atcaatttttagctttttgatttaaaactaaaacttttaaTTAACTATTT TCTACTCAAATACCTTTGCTATCCATTTGGTatattatttttggacctac cccggtggggtggaggtcctataaattcatctctgtctgttcgtccgtcc gtccgtccgttcgttaccagcttttctcgagattgaatcataggaatcat ttgatttttggtacaaaggtgcaaaacggtggtggccaaaatgtgacgag cctgattttcaaaaaaaaaaattttggggcaaatttgggccaaaaaacgg ctaaaaaacgggttttgaaaaattggatcattaatttcttttgatttttt gcatgaaagtagggtaccttcataggtaaaagatggctcaagcagatttt tgcaaaaaaatttatttggcttgaaaaacgcatgtttatctataagaatc agcatacattaatgttcttagtcaaattactcaatttctttatgagatag atgttttttttgctcacgagggcttacttttgaagcatatgtgtgtttag acatgaaattttggttgctttgcgtgtttttatagaaaaactggccaagt tcaatatttttttataggcacattatcaattacttaggtattagcttttc tcgagattggttctttcattctttaagactttttgcacaaagatgcataa ctataaaccctcaaatgtgacggagcccaatttttNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNcggctaaaaaaagggttttttggactttgtgaaatattggatcgttg tttttttctgattttttgcatgaaagtaggtaaaagatgggtcaagcaga tttttgggaaaaaacttttcagctcaaaaaacgcatctttatctataaga atcactattaataagcatacatcaatgtttttagccaaattactcaattt ttttatgagatagatgtcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNgtgttctgaatgattgtttaacgttcatgctcacgtag atatcaattatatatgtgttaaatgcataaccaggtaggtccataaaagt atcacttgtttcaaaATGATTTTAGGAGCGGCTTTATGCGTTTGTAGATC ATGACTGGCtcaaaaaagtgttttcaatTTGTGGAAAAATTCAATACATC AGGTAAGTTAAGTTACTGTTTCTTACTCGATATTGTTTTACTGGTAGAAT TAGGTTAAAAGAGGCCCTACCCTAAATAATATGGGGCTGAAATTTGACAT CATTCTACTGGACATTTCGAATCGGGGTTAAGTAATTGatcaaagttttg aattttactGAAGAGTTTTCGGAAGATTTTTCCGTAAACAATGTGTTTTA CAAACTAGAATAGTTGCCCTAACAATTTGAATATTAAATGTACCTGTCTT TTCAATAGGTCATTTCACAGTCAAAATGGATCacgggtaatcaggactga ttgcgcctccataatGGCTTTCTGTTAGCAAGACGCaataatcttcaaaa atttggaccaatagtaaatCATCATTATTAGCatgcagtggtcctgatta ccaaTTACGCTTTGcaactgtgaaatggcctataagGTTAATGaaactta aaaacttaaatGTTTTTCAGCTTACCAAGATACAAACATGACAACAAAAT CAAAGGTTTTGCTTTTATTGAGTTTGCTACAGCAGAAGAAGCTGAAAGAG CTTGCAAGGTAAATCATATATTTCCCCTAGTGAAAATCTTTATTGTGATC TTTTGCATTTGGTatgttttacttttgttttcaagtttatggtctatttt atttatttttctatgatgaTAAGTGgataaaaattgcttttttcatGTTC TAAAAAATAGGTTTTAAATTCAGTTGAAAAGAAGAGCCCAAAACAAGAAG AATCTTCCTCACCAATGAAAGGTCATCGTAAACGAAAAAGATCTACAAGC TTTTGTGAGTCAGAAAGCGATGCAAAAAAGGTTCTACCAGAAGCAACCCT GAGAAGACGGAGAACGGTCAGTGAATGTTCAAATGAAGCCGTTTCACCTG CTAAAACCAAGAAGAAGCGAAAATCTTCACTAGAAGATAGGTCTTTGTCA GACCTTAAAggtcaaattgaaaataataaatctgAAACAGGTGATAAAGA CAATAATAGAGATAAAGAGGCTACAACTGAAAGTAGTACGGAACCTACTG AAGCAAATACAGataatgaaaatgttgaagTTACAAATAATACAGATGCA GATTCGtcacagaaaaagaagaaaaatagaaaacataCCAAGAAAGACAA AGAAGTAAAAGAAGTGGTTGTTCCACCCCTTTATGTCATCTCaaagtatt tattttgttttacatTCATTCACCAGTAGTTTAAACAAAACTCTGTTTTT CTTCTGGTTGATCCTTTAGTATTTCAAGTGTTATAGAGTAGATTATTTTG ATGTGATGCTTTATATAATTTAGCCTGTTTTAGCATGTTTACAGTCCCTT CATACATACACCGGTTTAATTGGTAACTCTTCATCTAGCATAGCTAGAAA ATGAATATTGcgtttatgtttttcttttagagCAGAGTGGCTTTCTTTTA AACGACAATACAAACATTTGCAAAGAGGAGAATTTCAGAAGCTAAAACGA ACTACAAAAATCCTTAAAAGTGAACTGGTTAGACGAAAGgagttgaaaga aaaattctcATCAGGCCAAAGTTCAAAGACTGAAAATATAGAGAAGAAGA GCCAACAAAACACTGCACAAGGACAAATTATAGCAactaataatgataat aaaattGGACAAAAGCGTAAACATAAAGACGAACCATTGGTTGAGATTAA GGAGAactcaaaagaacaaaaagcaGCCAATGCTGAGccaagtgaaaaga aaacaaagaactcATCTTATGAGCTTGAGCCTGGCAGTGTAATCAAAGTA GCCACATCAATGGAATCTCTAACAAGAGACGTTATAAAAGTATCTATTTT TGTACTTTATCCTCAAAATATTGAATTCTTTTATCCTGCCAAGACAATTC AACATTCTTCTCACAAGAAATTGTACCTTCCCTCTTCAATATAATCCCCT TCTTCAACTATAATAACCTTACTATTACTTTTGCTTGTTTCCAGACCACT TTATCACCTTATGGAGAAATTGCTTATGTGGATTATATAAATGGTGCTCT CAAGGTGTGTTGAATGTATTGTATTTCAGTTTTCCTCTCCCTCTATATCT TATGTTTCTGTATGATATTGTAAAACTTTTGCTAATTTCATCAGGTTCTC AATTATATTCCCCCCNTTATGTTTCTGTATGATATTGTaaaatttttgct aattttatcAGGTTCTCAATCAtatccccccccccaaaaaaaatatcaag tacCCCATTCAATTTAGTTATACCTTGCCTTTGAAGGTTATTACTTTcat gtaaattttatttttagggaTATGTTCGTTTCAAGAGTGCTGAGAGTCGA AAGGAAGTTGAAGAAACAGCCAAAAACAAACAAGATGGATGGCAATTCAA AATCGAAGATTTGAAAGGTTCGGAACTGCTGACAATAGTCCTACTTTTGA ACCATAACAAATAATTCCCCCCTAAGTTTCCCTTAGAAATAGTTTAGTTC CTGTGGACATCTACTCCATGGtttcagattttcacaaaacaaAGCACTTC AAGAACATAATTACATTACATTTCTTATCACAGAGGGTGAAGAGGAAGCG TACTTCAAAAAAGCTCTTGAAGAACGCGCCAAACGATATGAGTTGAATGA GAAGAAGAAACAGAAGAGACAACAAAGAGGAACAATGAAAGTAAGCTGGA ATTTTGTTCAATTCTTTCCAATACATTTATCATGCATGGGACTGAGAGGT TCAATCATAGCCCGTATAAATAAACCTGGTCtagaagcttattgttttaa ctttttgttagctttttccttggttaatatcaaaagataaaaatcgatat gctcagtttttgatcacgttaccaagtactcctcttgggattggtttata atttaatcacgtgatcaaaaagtgagcaaaacgaACTAACTTCTTAatgc aagttcaagtaagaaactaTGGAAAGAAACAAGGCTTCCAGGCGGCGGTT TTTTATACAGACTACTTTTTGCAAAGtcgaaaaattgactttcgcaaatt tgaggaaaaaatgtttttcgcaagcataaactttcgcaaattgTTGAATA AAAATGGGAATTTTCGAATAAgaattgccttaaaagtgaaaaatattcct taaatccgATAATTAAAGACGGTTGCTCTTCGTGTGAGAGGAAGTCCCAG AACAGATAACCTTcgcttgataaaaacaaacaaaaactttgccaaTCAAA AGCTATCAATAAATAGCCTCAGTAATAGCGACGATGAACTGCCAACAAAA CAttagttgtttttttaattgtaaaaagtagcgttgacttttattagctt ttgttgctaccttttcgtcaacatgaaataaactattacatacatacata cgttcgactttaaaaaggcataAGGATAACAATAGGCtgaaaatttgatt cttattacGATTTCGAGTTTTATAAAGATTAAATTTGATACAAGGGTTTG CCTTTGgtcttaaatttggcaaaaaaatttgtacACGATCCTGCAGGATC AGCTTAGAAGATTttcaacatgttttttttacagGTTTTGAAACAAGCAG AAGACATGGCAACTTAAACATATTGAAGTACTtaacttattttatttttg acattgtaaataatttaaaacggatttttagatttcaattatctttacaa aaaacaactttaacttattgtctttctttttaaaagtGTGAACAAATACC TTCTTTGCTATAATTTGACACTTTTCTTGATGTAATCTATTTTTTTTACA GGTACATTTAGTTATAAATGTATAATAAAAATGTAATGAATAAAAAGTAA TATAAACAATAATAACCCAGCAACTGTAACAACATTTGAACATGAGTTCA GTGGAAGTTGATTATGGGTTGCTGTATTGGGCTGCAGCATCCTTCACTGT TGGTAGCTTCTTCTACTGGAACTATCACGAGAAGGCTAATCTCGTGAATC AACTGCAGGTACTGTGAGAATCTTTTTCCTGAAATGCCACcatttcaatg ttttcattttgaatcaaagtcgtcaaaattagaattttctcagaatattt atttttacgaattttttggTACTGTAAATAAAGGCCTTATCTTAAATCGT ACACCCATTTTTATGATTACCTCATTTCTAGAGTATGCCCAGATATGTGC CTGACCAGAAACTATACGACGATGTGTCAAGGAGCAACAATTTTATTTCT TATGCTGCCATCACTGGGAATGCTCAAGCTGATGATAAACATCTGTATGG TTTGAGAAGAACTTCTATGAAAGGATTGATTTCACATAATTATGTTGTCG AACACACAGAAGAACTCCATGAATCTTCAAATAAATGGTATGGACTTTAT ACTAGACTACAGTGTACTATGTTATAAGGTTTAATCACATTCAAACCTCT CTTATTGACCAcaataatattaaaaataatgTTCCTTTGTGTATGTAAGA TTTCTTAGGATTCTTTTATCTGTAAATGGAATGATTTTGAATAATGtgca ttttgaaattatattttattgctTTATTTTCTAGGAATAAAGATAAAAGA TCAATTTCCAACCAGTGGTCGTTTGTTCCTTTCAGTTTGTGCCGCTCAGG CTCCAAAATCCGTGTTTCAGTACAAAAACCTTTAGAAGCTGAGCTTAATT TAACAACAGTTTATGATAAGTATAGACCATCAAAAGCAACTGCTGCAGAC AAAGTGGTTGACTTTCTGTTCAGTAACAAACATGTCGTTGGGGTACAGTC TATTGAAAAAATGCTTTTACCTGATACCCAATTGACCGCTATCGGACAAG TCGTACTGCATGACGGTCATATCCGAATAGAACCTTCAGACCAAGGATTG AgatattatttgacgtcagattCCATCGAAAGCTTGGTCAGATCGGAGGA ATCAGTCGGATTTATCGTCAAAGTAGTAGCGGGTGTTTTTCTAGGCATCG GTGGTGTATTGTGTGGAAAATGGCTGTATGATTATTACAAGAGTTATCAA GAAGAGCTTGAGTATAGGCGACTGGAACTTGAAAATAACACCAATATTGG AGAGGATAAATGTGTGATATGTTTGGTCAAACCTAAGAACATTGTTTTGA TTCCATGTGGTCATGTGTGTGCTTGCAAAAAGTGTTTGGAACAATTGGAT AAATGTCCTATGTGTAGAAGAcctattgaaagaaaaataccaATTTTCTT GTAATTTATATCTTCCTAAAAATTTctgtttttaaattatttttactcCT GTTTTTAGCTGGAATATCTCTATTTTGCATTGTTctggtttttttttgtt ttttttttatggacattttcattttgatttttttttaaatctaaataaTA TTTGTCTTGCAAGATTTCAGCAAAAATGAATTGCAAGGAAATTCTCAAGT AAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00059670TCONS_00059670Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00059670-proteinTCONS_00059670-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_330supercontigscaffold_330:164835..173639 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
LARP7la-related protein 7 isoform 2 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.31 14.07 11.5 11.02 36.26 28.82 18.35 19.65 15.03 14.23 10.35 9.08 6.48 6.1 8.98 8.85 13.09 11 3.06 4.11 6.85 6.23 18.13 16.06 13.6 15.27 4.67 3.17 11.64 11.94